Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | NAKAJIMA_MCS_UP |
| Enrichment Score (ES) | 0.53633475 |
| Normalized Enrichment Score (NES) | 1.8590747 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.017876454 |
| FWER p-Value | 0.81 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | IL1RL1 | IL1RL1 Entrez, Source | interleukin 1 receptor-like 1 | 31 | 0.742 | 0.1002 | Yes |
| 2 | LGALS1 | LGALS1 Entrez, Source | lectin, galactoside-binding, soluble, 1 (galectin 1) | 60 | 0.614 | 0.1829 | Yes |
| 3 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 145 | 0.452 | 0.2390 | Yes |
| 4 | CCL3 | CCL3 Entrez, Source | chemokine (C-C motif) ligand 3 | 353 | 0.281 | 0.2622 | Yes |
| 5 | IER3 | IER3 Entrez, Source | immediate early response 3 | 392 | 0.264 | 0.2957 | Yes |
| 6 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 506 | 0.226 | 0.3184 | Yes |
| 7 | CCR1 | CCR1 Entrez, Source | chemokine (C-C motif) receptor 1 | 564 | 0.213 | 0.3436 | Yes |
| 8 | IFNGR1 | IFNGR1 Entrez, Source | interferon gamma receptor 1 | 611 | 0.205 | 0.3684 | Yes |
| 9 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 759 | 0.176 | 0.3816 | Yes |
| 10 | IL6R | IL6R Entrez, Source | interleukin 6 receptor | 761 | 0.176 | 0.4059 | Yes |
| 11 | CX3CL1 | CX3CL1 Entrez, Source | chemokine (C-X3-C motif) ligand 1 | 837 | 0.164 | 0.4229 | Yes |
| 12 | IL10 | IL10 Entrez, Source | interleukin 10 | 842 | 0.163 | 0.4452 | Yes |
| 13 | CCL7 | CCL7 Entrez, Source | chemokine (C-C motif) ligand 7 | 860 | 0.161 | 0.4662 | Yes |
| 14 | IL3RA | IL3RA Entrez, Source | interleukin 3 receptor, alpha (low affinity) | 1013 | 0.146 | 0.4749 | Yes |
| 15 | IL1B | IL1B Entrez, Source | interleukin 1, beta | 1197 | 0.128 | 0.4788 | Yes |
| 16 | GADD45B | GADD45B Entrez, Source | growth arrest and DNA-damage-inducible, beta | 1210 | 0.127 | 0.4954 | Yes |
| 17 | CMA1 | CMA1 Entrez, Source | chymase 1, mast cell | 1371 | 0.115 | 0.4993 | Yes |
| 18 | IFNG | IFNG Entrez, Source | interferon, gamma | 1653 | 0.100 | 0.4919 | Yes |
| 19 | CAPG | CAPG Entrez, Source | capping protein (actin filament), gelsolin-like | 1684 | 0.098 | 0.5032 | Yes |
| 20 | IL2RB | IL2RB Entrez, Source | interleukin 2 receptor, beta | 1686 | 0.098 | 0.5167 | Yes |
| 21 | CSF1 | CSF1 Entrez, Source | colony stimulating factor 1 (macrophage) | 1723 | 0.096 | 0.5273 | Yes |
| 22 | SPP1 | SPP1 Entrez, Source | secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) | 1776 | 0.094 | 0.5363 | Yes |
| 23 | FCER1A | FCER1A Entrez, Source | Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide | 2214 | 0.077 | 0.5140 | No |
| 24 | CSF3 | CSF3 Entrez, Source | colony stimulating factor 3 (granulocyte) | 2483 | 0.069 | 0.5033 | No |
| 25 | CSF1R | CSF1R Entrez, Source | colony stimulating factor 1 receptor, formerly McDonough feline sarcoma viral (v-fms) oncogene homolog | 2552 | 0.066 | 0.5073 | No |
| 26 | CSF2 | CSF2 Entrez, Source | colony stimulating factor 2 (granulocyte-macrophage) | 2558 | 0.066 | 0.5160 | No |
| 27 | CCL11 | CCL11 Entrez, Source | chemokine (C-C motif) ligand 11 | 2565 | 0.066 | 0.5247 | No |
| 28 | IL2RG | IL2RG Entrez, Source | interleukin 2 receptor, gamma (severe combined immunodeficiency) | 2582 | 0.065 | 0.5325 | No |
| 29 | CCR2 | CCR2 Entrez, Source | chemokine (C-C motif) receptor 2 | 2793 | 0.060 | 0.5250 | No |
| 30 | IL5 | IL5 Entrez, Source | interleukin 5 (colony-stimulating factor, eosinophil) | 3140 | 0.051 | 0.5060 | No |
| 31 | IL18 | IL18 Entrez, Source | interleukin 18 (interferon-gamma-inducing factor) | 3347 | 0.046 | 0.4968 | No |
| 32 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 3540 | 0.042 | 0.4881 | No |
| 33 | CLU | CLU Entrez, Source | clusterin | 3739 | 0.038 | 0.4785 | No |
| 34 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 3854 | 0.036 | 0.4748 | No |
| 35 | IL4R | IL4R Entrez, Source | interleukin 4 receptor | 4494 | 0.024 | 0.4299 | No |
| 36 | IGFBP5 | IGFBP5 Entrez, Source | insulin-like growth factor binding protein 5 | 4507 | 0.023 | 0.4322 | No |
| 37 | CYP11A1 | CYP11A1 Entrez, Source | cytochrome P450, family 11, subfamily A, polypeptide 1 | 5093 | 0.014 | 0.3899 | No |
| 38 | IL3 | IL3 Entrez, Source | interleukin 3 (colony-stimulating factor, multiple) | 5167 | 0.012 | 0.3861 | No |
| 39 | IL10RA | IL10RA Entrez, Source | interleukin 10 receptor, alpha | 5276 | 0.011 | 0.3794 | No |
| 40 | CXCL5 | CXCL5 Entrez, Source | chemokine (C-X-C motif) ligand 5 | 5599 | 0.006 | 0.3560 | No |
| 41 | TPSAB1 | TPSAB1 Entrez, Source | tryptase alpha/beta 1 | 5716 | 0.004 | 0.3478 | No |
| 42 | HPGD | HPGD Entrez, Source | hydroxyprostaglandin dehydrogenase 15-(NAD) | 5728 | 0.004 | 0.3475 | No |
| 43 | MAOA | MAOA Entrez, Source | monoamine oxidase A | 5751 | 0.003 | 0.3463 | No |
| 44 | TNF | TNF Entrez, Source | tumor necrosis factor (TNF superfamily, member 2) | 5914 | 0.001 | 0.3343 | No |
| 45 | CXCR4 | CXCR4 Entrez, Source | chemokine (C-X-C motif) receptor 4 | 5981 | 0.000 | 0.3293 | No |
| 46 | IL2RA | IL2RA Entrez, Source | interleukin 2 receptor, alpha | 5995 | 0.000 | 0.3284 | No |
| 47 | CCR4 | CCR4 Entrez, Source | chemokine (C-C motif) receptor 4 | 6053 | -0.001 | 0.3242 | No |
| 48 | CCL22 | CCL22 Entrez, Source | chemokine (C-C motif) ligand 22 | 6089 | -0.001 | 0.3218 | No |
| 49 | CPA3 | CPA3 Entrez, Source | carboxypeptidase A3 (mast cell) | 6250 | -0.004 | 0.3102 | No |
| 50 | IL2 | IL2 Entrez, Source | interleukin 2 | 6369 | -0.006 | 0.3021 | No |
| 51 | CCL4 | CCL4 Entrez, Source | chemokine (C-C motif) ligand 4 | 6591 | -0.009 | 0.2867 | No |
| 52 | IL12B | IL12B Entrez, Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 6624 | -0.009 | 0.2856 | No |
| 53 | KIT | KIT Entrez, Source | v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog | 6856 | -0.013 | 0.2700 | No |
| 54 | IL11RA1 | 7358 | -0.020 | 0.2351 | No | ||
| 55 | IL1A | IL1A Entrez, Source | interleukin 1, alpha | 7552 | -0.023 | 0.2237 | No |
| 56 | CCR6 | CCR6 Entrez, Source | chemokine (C-C motif) receptor 6 | 7586 | -0.024 | 0.2246 | No |
| 57 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 7646 | -0.025 | 0.2236 | No |
| 58 | HSP90AB1 | HSP90AB1 Entrez, Source | heat shock protein 90kDa alpha (cytosolic), class B member 1 | 7690 | -0.026 | 0.2239 | No |
| 59 | CX3CR1 | CX3CR1 Entrez, Source | chemokine (C-X3-C motif) receptor 1 | 7909 | -0.029 | 0.2115 | No |
| 60 | IL13 | IL13 Entrez, Source | interleukin 13 | 7984 | -0.031 | 0.2101 | No |
| 61 | MCPT6 | 8028 | -0.031 | 0.2112 | No | ||
| 62 | ASNS | ASNS Entrez, Source | asparagine synthetase | 8596 | -0.040 | 0.1741 | No |
| 63 | CXCR3 | CXCR3 Entrez, Source | chemokine (C-X-C motif) receptor 3 | 8633 | -0.041 | 0.1770 | No |
| 64 | CCL5 | CCL5 Entrez, Source | chemokine (C-C motif) ligand 5 | 8913 | -0.046 | 0.1623 | No |
| 65 | CCR3 | CCR3 Entrez, Source | chemokine (C-C motif) receptor 3 | 9334 | -0.053 | 0.1380 | No |
| 66 | ERO1L | ERO1L Entrez, Source | ERO1-like (S. cerevisiae) | 9559 | -0.057 | 0.1290 | No |
| 67 | IL7 | IL7 Entrez, Source | interleukin 7 | 9952 | -0.066 | 0.1085 | No |
| 68 | CD63 | CD63 Entrez, Source | CD63 molecule | 10073 | -0.068 | 0.1089 | No |
| 69 | HDC | HDC Entrez, Source | histidine decarboxylase | 10195 | -0.070 | 0.1095 | No |
| 70 | IFNB1 | IFNB1 Entrez, Source | interferon, beta 1, fibroblast | 10923 | -0.089 | 0.0669 | No |
| 71 | LGALS3 | LGALS3 Entrez, Source | lectin, galactoside-binding, soluble, 3 (galectin 3) | 11945 | -0.124 | 0.0071 | No |
| 72 | TPH1 | TPH1 Entrez, Source | tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) | 12235 | -0.139 | 0.0045 | No |
| 73 | IL9R | IL9R Entrez, Source | interleukin 9 receptor | 12552 | -0.159 | 0.0026 | No |
| 74 | HNRPA1 | HNRPA1 Entrez, Source | heterogeneous nuclear ribonucleoprotein A1 | 13288 | -0.411 | 0.0041 | No |
