Details for gene set NETPATH_EGFR1_PATHWAY

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	NETPATH_EGFR1_PATHWAY_UP
Enrichment Score (ES)	0.5037028
Normalized Enrichment Score (NES)	1.8171833
Nominal p-value	0.0
FDR q-value	0.022836505
FWER p-Value	0.934

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	VIM	VIM Entrez, Source	vimentin	4	1.225	0.0981	Yes
2	ANXA1	ANXA1 Entrez, Source	annexin A1	11	0.884	0.1686	Yes
3	CTGF	CTGF Entrez, Source	connective tissue growth factor	27	0.757	0.2282	Yes
4	CORO1A	CORO1A Entrez, Source	coronin, actin binding protein, 1A	77	0.560	0.2695	Yes
5	GPRC5A	GPRC5A Entrez, Source	G protein-coupled receptor, family C, group 5, member A	78	0.559	0.3144	Yes
6	EMP1	EMP1 Entrez, Source	epithelial membrane protein 1	101	0.510	0.3537	Yes
7	TAGLN	TAGLN Entrez, Source	transgelin	250	0.344	0.3701	Yes
8	IER3	IER3 Entrez, Source	immediate early response 3	392	0.264	0.3806	Yes
9	SLC20A1	SLC20A1 Entrez, Source	solute carrier family 20 (phosphate transporter), member 1	484	0.232	0.3924	Yes
10	ZFP36L2	ZFP36L2 Entrez, Source	zinc finger protein 36, C3H type-like 2	498	0.228	0.4097	Yes
11	MGLL	MGLL Entrez, Source	monoglyceride lipase	510	0.224	0.4269	Yes
12	CLDN4	CLDN4 Entrez, Source	claudin 4	570	0.212	0.4395	Yes
13	TGFB2	TGFB2 Entrez, Source	transforming growth factor, beta 2	659	0.195	0.4485	Yes
14	EGR1	EGR1 Entrez, Source	early growth response 1	756	0.176	0.4554	Yes
15	SPRY2	SPRY2 Entrez, Source	sprouty homolog 2 (Drosophila)	784	0.172	0.4672	Yes
16	CAV2	CAV2 Entrez, Source	caveolin 2	1186	0.129	0.4473	Yes
17	LIF	LIF Entrez, Source	leukemia inhibitory factor (cholinergic differentiation factor)	1203	0.127	0.4563	Yes
18	PHLDA1	PHLDA1 Entrez, Source	pleckstrin homology-like domain, family A, member 1	1221	0.126	0.4651	Yes
19	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	1241	0.124	0.4737	Yes
20	DUSP1	DUSP1 Entrez, Source	dual specificity phosphatase 1	1261	0.123	0.4821	Yes
21	MMP7	MMP7 Entrez, Source	matrix metallopeptidase 7 (matrilysin, uterine)	1342	0.117	0.4854	Yes
22	DUSP6	DUSP6 Entrez, Source	dual specificity phosphatase 6	1504	0.108	0.4819	Yes
23	PLK2	PLK2 Entrez, Source	polo-like kinase 2 (Drosophila)	1523	0.107	0.4892	Yes
24	FGFBP1	FGFBP1 Entrez, Source	fibroblast growth factor binding protein 1	1532	0.106	0.4971	Yes
25	TGM2	TGM2 Entrez, Source	transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)	1650	0.100	0.4963	Yes
26	SPP1	SPP1 Entrez, Source	secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)	1776	0.094	0.4944	Yes
27	ACOT7	ACOT7 Entrez, Source	acyl-CoA thioesterase 7	1811	0.092	0.4992	Yes
28	HBEGF	HBEGF Entrez, Source	heparin-binding EGF-like growth factor	1849	0.091	0.5037	Yes
29	HS3ST1	HS3ST1 Entrez, Source	heparan sulfate (glucosamine) 3-O-sulfotransferase 1	2172	0.078	0.4857	No
30	HPCAL1	HPCAL1 Entrez, Source	hippocalcin-like 1	2224	0.076	0.4880	No
31	DUSP4	DUSP4 Entrez, Source	dual specificity phosphatase 4	2400	0.071	0.4804	No
32	TGFA	TGFA Entrez, Source	transforming growth factor, alpha	2430	0.070	0.4839	No
33	AR	AR Entrez, Source	androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease)	2477	0.069	0.4859	No
34	CDKN1B	CDKN1B Entrez, Source	cyclin-dependent kinase inhibitor 1B (p27, Kip1)	2499	0.068	0.4898	No
35	MAPT	MAPT Entrez, Source	microtubule-associated protein tau	2638	0.064	0.4845	No
36	ZYX	ZYX Entrez, Source	zyxin	2654	0.063	0.4884	No
37	CCND1	CCND1 Entrez, Source	cyclin D1	2668	0.063	0.4925	No
38	DKK3	DKK3 Entrez, Source	dickkopf homolog 3 (Xenopus laevis)	2975	0.055	0.4738	No
39	PLAUR	PLAUR Entrez, Source	plasminogen activator, urokinase receptor	2983	0.055	0.4777	No
40	EREG	EREG Entrez, Source	epiregulin	3011	0.054	0.4800	No
41	SDC4	SDC4 Entrez, Source	syndecan 4 (amphiglycan, ryudocan)	3385	0.045	0.4555	No
42	NR4A3	NR4A3 Entrez, Source	nuclear receptor subfamily 4, group A, member 3	3417	0.045	0.4568	No
43	CDKN1A	CDKN1A Entrez, Source	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	3506	0.043	0.4536	No
44	SAA4	SAA4 Entrez, Source	serum amyloid A4, constitutive	4017	0.033	0.4177	No
45	SNAI1	SNAI1 Entrez, Source	snail homolog 1 (Drosophila)	4250	0.028	0.4024	No
46	AKAP12	AKAP12 Entrez, Source	A kinase (PRKA) anchor protein (gravin) 12	4283	0.028	0.4022	No
47	IL4R	IL4R Entrez, Source	interleukin 4 receptor	4494	0.024	0.3883	No
48	CDK9	CDK9 Entrez, Source	cyclin-dependent kinase 9 (CDC2-related kinase)	4558	0.022	0.3853	No
49	BUB1B	BUB1B Entrez, Source	BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)	4680	0.020	0.3778	No
50	CYCS	CYCS Entrez, Source	cytochrome c, somatic	4888	0.017	0.3635	No
51	LCN2	LCN2 Entrez, Source	lipocalin 2 (oncogene 24p3)	5175	0.012	0.3429	No
52	TUBG1	TUBG1 Entrez, Source	tubulin, gamma 1	5540	0.007	0.3160	No
53	CDC42	CDC42 Entrez, Source	cell division cycle 42 (GTP binding protein, 25kDa)	5548	0.007	0.3160	No
54	CXCL5	CXCL5 Entrez, Source	chemokine (C-X-C motif) ligand 5	5599	0.006	0.3127	No
55	GJB2	GJB2 Entrez, Source	gap junction protein, beta 2, 26kDa (connexin 26)	5644	0.005	0.3097	No
56	E2F1	E2F1 Entrez, Source	E2F transcription factor 1	5669	0.005	0.3083	No
57	EHD1	EHD1 Entrez, Source	EH-domain containing 1	5701	0.004	0.3063	No
58	MT3	MT3 Entrez, Source	metallothionein 3 (growth inhibitory factor (neurotrophic))	6193	-0.003	0.2695	No
59	ESR1	ESR1 Entrez, Source	estrogen receptor 1	6300	-0.005	0.2619	No
60	MSLN	MSLN Entrez, Source	mesothelin	6641	-0.010	0.2370	No
61	CCNC	CCNC Entrez, Source	cyclin C	7174	-0.018	0.1982	No
62	PLCG1	PLCG1 Entrez, Source	phospholipase C, gamma 1	7527	-0.023	0.1735	No
63	UBE2N	UBE2N Entrez, Source	ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast)	7534	-0.023	0.1749	No
64	SERPINB2	SERPINB2 Entrez, Source	serpin peptidase inhibitor, clade B (ovalbumin), member 2	7731	-0.026	0.1622	No
65	TMEM97	TMEM97 Entrez, Source	transmembrane protein 97	7845	-0.028	0.1559	No
66	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	8086	-0.032	0.1404	No
67	NOS1	NOS1 Entrez, Source	nitric oxide synthase 1 (neuronal)	8645	-0.041	0.1016	No
68	PPP2R1A	PPP2R1A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), alpha isoform	8698	-0.042	0.1010	No
69	PTHLH	PTHLH Entrez, Source	parathyroid hormone-like hormone	8761	-0.043	0.0998	No
70	HPRT1	HPRT1 Entrez, Source	hypoxanthine phosphoribosyltransferase 1 (Lesch-Nyhan syndrome)	8796	-0.044	0.1007	No
71	PTGS2	PTGS2 Entrez, Source	prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	8937	-0.046	0.0939	No
72	PPP1R10	PPP1R10 Entrez, Source	protein phosphatase 1, regulatory subunit 10	9241	-0.051	0.0751	No
73	FASLG	FASLG Entrez, Source	Fas ligand (TNF superfamily, member 6)	9771	-0.061	0.0401	No
74	HGF	HGF Entrez, Source	hepatocyte growth factor (hepapoietin A; scatter factor)	9857	-0.063	0.0387	No
75	ITGB5	ITGB5 Entrez, Source	integrin, beta 5	9946	-0.065	0.0373	No
76	COMMD10	COMMD10 Entrez, Source	COMM domain containing 10	9979	-0.066	0.0402	No
77	MMP3	MMP3 Entrez, Source	matrix metallopeptidase 3 (stromelysin 1, progelatinase)	10103	-0.068	0.0364	No
78	GADD45A	GADD45A Entrez, Source	growth arrest and DNA-damage-inducible, alpha	10152	-0.069	0.0384	No
79	CYP27B1	CYP27B1 Entrez, Source	cytochrome P450, family 27, subfamily B, polypeptide 1	10490	-0.077	0.0192	No
80	UBE2A	UBE2A Entrez, Source	ubiquitin-conjugating enzyme E2A (RAD6 homolog)	10509	-0.078	0.0241	No
81	FKBP4	FKBP4 Entrez, Source	FK506 binding protein 4, 59kDa	10541	-0.079	0.0281	No
82	MYC	MYC Entrez, Source	v-myc myelocytomatosis viral oncogene homolog (avian)	10547	-0.079	0.0340	No
83	HAS2	HAS2 Entrez, Source	hyaluronan synthase 2	10766	-0.084	0.0243	No
84	HNRPK	HNRPK Entrez, Source	heterogeneous nuclear ribonucleoprotein K	10815	-0.086	0.0276	No
85	RPL15	RPL15 Entrez, Source	ribosomal protein L15	11041	-0.091	0.0179	No
86	BZW1	BZW1 Entrez, Source	basic leucine zipper and W2 domains 1	11133	-0.094	0.0186	No
87	VEGF	VEGF Entrez, Source	vascular endothelial growth factor	11386	-0.102	0.0078	No
88	HNRPAB	HNRPAB Entrez, Source	heterogeneous nuclear ribonucleoprotein A/B	11401	-0.102	0.0149	No
89	AREG	AREG Entrez, Source	amphiregulin (schwannoma-derived growth factor)	11612	-0.110	0.0079	No
90	PRPS1	PRPS1 Entrez, Source	phosphoribosyl pyrophosphate synthetase 1	11832	-0.118	0.0008	No
91	PLAU	PLAU Entrez, Source	plasminogen activator, urokinase	11891	-0.121	0.0062	No
92	AMD1	AMD1 Entrez, Source	adenosylmethionine decarboxylase 1	12376	-0.147	-0.0186	No
93	SOX9	SOX9 Entrez, Source	SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal)	12407	-0.149	-0.0089	No
94	NOL5A	NOL5A Entrez, Source	nucleolar protein 5A (56kDa with KKE/D repeat)	12500	-0.155	-0.0034	No
95	MET	MET Entrez, Source	met proto-oncogene (hepatocyte growth factor receptor)	12611	-0.164	0.0015	No
96	TUBB	TUBB Entrez, Source	tubulin, beta	12909	-0.201	-0.0049	No
97	CA2	CA2 Entrez, Source	carbonic anhydrase II	12972	-0.213	0.0076	No
98	PPAT	PPAT Entrez, Source	phosphoribosyl pyrophosphate amidotransferase	13102	-0.253	0.0181	No