Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_48h.class.cls
#double_gel_8d_versus_double_gel_48h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in classdouble_gel_48h
GeneSetNUCLEAR_PART
Enrichment Score (ES)-0.4133203
Normalized Enrichment Score (NES)-1.8224185
Nominal p-value0.0
FDR q-value0.045236137
FWER p-Value0.84
Table: GSEA Results Summary



Fig 1: Enrichment plot: NUCLEAR_PART   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOL3NOL3
Entrez,  Source
nucleolar protein 3 (apoptosis repressor with CARD domain)2020.3850.0028No
2XRCC4XRCC4
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 45750.211-0.0157No
3RETSATRETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)7300.181-0.0189No
4LMO4LMO4
Entrez,  Source
LIM domain only 48080.169-0.0168No
5TERF2IPTERF2IP
Entrez,  Source
telomeric repeat binding factor 2, interacting protein8320.165-0.0108No
6DNAJB9DNAJB9
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 98860.157-0.0074No
7BNIP3LBNIP3L
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 3-like9210.154-0.0027No
8SCRN1SCRN1
Entrez,  Source
secernin 110230.145-0.0036No
9PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha11810.130-0.0094No
10MEN1MEN1
Entrez,  Source
multiple endocrine neoplasia I11940.128-0.0043No
11NUP50NUP50
Entrez,  Source
nucleoporin 50kDa12970.120-0.0064No
12EPAS1EPAS1
Entrez,  Source
endothelial PAS domain protein 113210.118-0.0026No
13BARD1BARD1
Entrez,  Source
BRCA1 associated RING domain 113440.1170.0013No
14PRICKLE1PRICKLE1
Entrez,  Source
prickle homolog 1 (Drosophila)13770.1150.0043No
15NPM2NPM2
Entrez,  Source
nucleophosmin/nucleoplasmin, 214220.1120.0062No
16KLHL7KLHL7
Entrez,  Source
kelch-like 7 (Drosophila)15810.103-0.0010No
17CIB1CIB1
Entrez,  Source
calcium and integrin binding 1 (calmyrin)16880.098-0.0044No
18NAP1L2NAP1L2
Entrez,  Source
nucleosome assembly protein 1-like 217110.097-0.0015No
19HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A19590.087-0.0163No
20DEDDDEDD
Entrez,  Source
death effector domain containing20430.083-0.0187No
21SMARCA2SMARCA2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 223000.074-0.0348No
22BREBRE
Entrez,  Source
brain and reproductive organ-expressed (TNFRSF1A modulator)23500.072-0.0351No
23BNIP3BNIP3
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 323910.071-0.0348No
24PAMPAM
Entrez,  Source
peptidylglycine alpha-amidating monooxygenase24850.069-0.0387No
25STAG3STAG3
Entrez,  Source
stromal antigen 327520.061-0.0561No
26PPP1R9BPPP1R9B
Entrez,  Source
protein phosphatase 1, regulatory subunit 9B, spinophilin29000.057-0.0646No
27NCR1NCR1
Entrez,  Source
natural cytotoxicity triggering receptor 129940.055-0.0691No
28JUNJUN
Entrez,  Source
jun oncogene31040.052-0.0750No
29GTF3C2GTF3C2
Entrez,  Source
general transcription factor IIIC, polypeptide 2, beta 110kDa31710.050-0.0777No
30ATXN1ATXN1
Entrez,  Source
ataxin 131970.050-0.0772No
31ELL2ELL2
Entrez,  Source
elongation factor, RNA polymerase II, 233520.046-0.0868No
32CDKN2ACDKN2A
Entrez,  Source
cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)34010.045-0.0884No
33NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 635270.042-0.0959No
34SMARCD2SMARCD2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 235660.041-0.0969No
35EXOSC9EXOSC9
Entrez,  Source
exosome component 936100.041-0.0982No
36SP140SP140
Entrez,  Source
SP140 nuclear body protein36550.040-0.0997No
37ISG20ISG20
Entrez,  Source
interferon stimulated exonuclease gene 20kDa37320.038-0.1037No
38HDAC5HDAC5
Entrez,  Source
histone deacetylase 537420.038-0.1026No
39TAF9TAF9
Entrez,  Source
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa37570.037-0.1019No
40CDC26CDC26
Entrez,  Source
cell division cycle 2638420.036-0.1067No
41REXO4REXO4
Entrez,  Source
REX4, RNA exonuclease 4 homolog (S. cerevisiae)39890.033-0.1162No
42HCLS1HCLS1
Entrez,  Source
hematopoietic cell-specific Lyn substrate 140750.031-0.1213No
43DDX19BDDX19B
Entrez,  Source
DEAD (Asp-Glu-Ala-As) box polypeptide 19B42790.028-0.1355No
44MCRS1MCRS1
Entrez,  Source
microspherule protein 143090.027-0.1364No
45NARFNARF
Entrez,  Source
nuclear prelamin A recognition factor43800.026-0.1405No
46MSH2MSH2
Entrez,  Source
mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)44140.025-0.1418No
47SPTBN4SPTBN4
Entrez,  Source
spectrin, beta, non-erythrocytic 444320.025-0.1420No
48DULLARDDULLARD
Entrez,  Source
dullard homolog (Xenopus laevis)44580.024-0.1427No
49RELARELA
Entrez,  Source
v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)44830.024-0.1435No
50CDK9CDK9
Entrez,  Source
cyclin-dependent kinase 9 (CDC2-related kinase)45580.022-0.1481No
51BUB1BBUB1B
Entrez,  Source
BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)46800.020-0.1563No
52NFYANFYA
Entrez,  Source
nuclear transcription factor Y, alpha48330.018-0.1671No
53PTF1APTF1A
Entrez,  Source
pancreas specific transcription factor, 1a48860.017-0.1703No
54HDAC3HDAC3
Entrez,  Source
histone deacetylase 349670.016-0.1756No
55ACTBACTB
Entrez,  Source
actin, beta50410.014-0.1805No
56ZBTB16ZBTB16
Entrez,  Source
zinc finger and BTB domain containing 1650420.014-0.1799No
57NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta50580.014-0.1803No
58SUMO1SUMO1
Entrez,  Source
SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)51360.013-0.1856No
59PARP1PARP1
Entrez,  Source
poly (ADP-ribose) polymerase family, member 152310.011-0.1923No
60MSH3MSH3
Entrez,  Source
mutS homolog 3 (E. coli)53100.010-0.1978No
61HTATIPHTATIP
Entrez,  Source
HIV-1 Tat interacting protein, 60kDa55280.007-0.2140No
62TUBG1TUBG1
Entrez,  Source
tubulin, gamma 155400.007-0.2145No
63NBNNBN
Entrez,  Source
nibrin55800.006-0.2172No
64ZCRB1ZCRB1
Entrez,  Source
zinc finger CCHC-type and RNA binding motif 155870.006-0.2174No
65GNAZGNAZ
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha z polypeptide58100.003-0.2342No
66ASNA1ASNA1
Entrez,  Source
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)58710.002-0.2387No
67ZNF148ZNF148
Entrez,  Source
zinc finger protein 14859160.001-0.2420No
68TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I6078-0.001-0.2543No
69GUCY2DGUCY2D
Entrez,  Source
guanylate cyclase 2D, membrane (retina-specific)6125-0.002-0.2577No
70SF3B4SF3B4
Entrez,  Source
splicing factor 3b, subunit 4, 49kDa6322-0.005-0.2724No
71BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 26363-0.006-0.2752No
72TBPTBP
Entrez,  Source
TATA box binding protein6398-0.006-0.2775No
73SMARCB1SMARCB1
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 16408-0.006-0.2779No
74PHF5APHF5A
Entrez,  Source
PHD finger protein 5A6441-0.007-0.2800No
75SMARCA4SMARCA4
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 46475-0.007-0.2822No
76CHAF1BCHAF1B
Entrez,  Source
chromatin assembly factor 1, subunit B (p60)6494-0.008-0.2832No
77NUP98NUP98
Entrez,  Source
nucleoporin 98kDa6561-0.008-0.2879No
78NRMNRM
Entrez,  Source
nurim (nuclear envelope membrane protein)6753-0.011-0.3019No
79PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA16758-0.012-0.3017No
80BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset6790-0.012-0.3035No
81U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 26904-0.014-0.3115No
82RGS12RGS12
Entrez,  Source
regulator of G-protein signalling 126916-0.014-0.3117No
83COILCOIL
Entrez,  Source
coilin6923-0.014-0.3115No
84PRM2PRM2
Entrez,  Source
protamine 27003-0.015-0.3168No
85NAP1L4NAP1L4
Entrez,  Source
nucleosome assembly protein 1-like 47012-0.015-0.3167No
86ERCC3ERCC3
Entrez,  Source
excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)7085-0.016-0.3214No
87SMAD4SMAD4
Entrez,  Source
SMAD, mothers against DPP homolog 4 (Drosophila)7113-0.017-0.3227No
88KLHDC3KLHDC3
Entrez,  Source
kelch domain containing 37180-0.018-0.3269No
89HSPD1HSPD1
Entrez,  Source
heat shock 60kDa protein 1 (chaperonin)7283-0.019-0.3337No
90ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)7295-0.019-0.3337No
91EMDEMD
Entrez,  Source
emerin (Emery-Dreifuss muscular dystrophy)7369-0.021-0.3383No
92NFYCNFYC
Entrez,  Source
nuclear transcription factor Y, gamma7410-0.021-0.3403No
93RTN4RTN4
Entrez,  Source
reticulon 47528-0.023-0.3482No
94GATAD2AGATAD2A
Entrez,  Source
GATA zinc finger domain containing 2A7565-0.024-0.3498No
95GIT2GIT2
Entrez,  Source
G protein-coupled receptor kinase interactor 27717-0.026-0.3601No
96TAF6TAF6
Entrez,  Source
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa7744-0.027-0.3609No
97HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)7751-0.027-0.3601No
98KPNA2KPNA2
Entrez,  Source
karyopherin alpha 2 (RAG cohort 1, importin alpha 1)7811-0.028-0.3633No
99SUB1SUB1
Entrez,  Source
SUB1 homolog (S. cerevisiae)7882-0.029-0.3672No
100PPARGC1BPPARGC1B
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, beta7905-0.029-0.3675No
101IKBKAPIKBKAP
Entrez,  Source
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein7916-0.029-0.3669No
102SMC1ASMC1A
Entrez,  Source
structural maintenance of chromosomes 1A7928-0.030-0.3664No
103SF3A2SF3A2
Entrez,  Source
splicing factor 3a, subunit 2, 66kDa7935-0.030-0.3654No
104SMARCD3SMARCD3
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 37948-0.030-0.3649No
105NUP62NUP62
Entrez,  Source
nucleoporin 62kDa8059-0.032-0.3718No
106RTCD1RTCD1
Entrez,  Source
RNA terminal phosphate cyclase domain 18083-0.032-0.3721No
107COPS2COPS2
Entrez,  Source
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)8189-0.034-0.3785No
108PHF12PHF12
Entrez,  Source
PHD finger protein 128193-0.034-0.3771No
109TEP1TEP1
Entrez,  Source
telomerase-associated protein 18212-0.034-0.3769No
110HDAC10HDAC10
Entrez,  Source
histone deacetylase 108278-0.035-0.3802No
111PITX2PITX2
Entrez,  Source
paired-like homeodomain transcription factor 28349-0.037-0.3838No
112CPSF3CPSF3
Entrez,  Source
cleavage and polyadenylation specific factor 3, 73kDa8375-0.037-0.3840No
113SMAD2SMAD2
Entrez,  Source
SMAD, mothers against DPP homolog 2 (Drosophila)8430-0.038-0.3863No
114TTNTTN
Entrez,  Source
titin8450-0.038-0.3860No
115SC65SC65
Entrez,  Source
-8463-0.038-0.3851No
116NUDT21NUDT21
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 218466-0.038-0.3834No
117RAD50RAD50
Entrez,  Source
RAD50 homolog (S. cerevisiae)8469-0.038-0.3817No
118OGG1OGG1
Entrez,  Source
8-oxoguanine DNA glycosylase8478-0.039-0.3805No
119THRAP3THRAP3
Entrez,  Source
thyroid hormone receptor associated protein 38530-0.039-0.3825No
120TAF11TAF11
Entrez,  Source
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa8562-0.040-0.3830No
121FOXE3FOXE3
Entrez,  Source
forkhead box E38571-0.040-0.3818No
122SAP18SAP18
Entrez,  Source
Sin3A-associated protein, 18kDa8573-0.040-0.3799No
123PCGF6PCGF6
Entrez,  Source
polycomb group ring finger 68582-0.040-0.3787No
124HNRPDLHNRPDL
Entrez,  Source
heterogeneous nuclear ribonucleoprotein D-like8663-0.041-0.3828No
125H2AFYH2AFY
Entrez,  Source
H2A histone family, member Y8675-0.042-0.3817No
126DDX24DDX24
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 248687-0.042-0.3806No
127UBE2IUBE2I
Entrez,  Source
ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)8725-0.043-0.3814No
128CHEK2CHEK2
Entrez,  Source
CHK2 checkpoint homolog (S. pombe)8735-0.043-0.3800No
129INTS6INTS6
Entrez,  Source
integrator complex subunit 68753-0.043-0.3793No
130DDX47DDX47
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 478805-0.044-0.3811No
131CHEK1CHEK1
Entrez,  Source
CHK1 checkpoint homolog (S. pombe)8812-0.044-0.3795No
132SLU7SLU7
Entrez,  Source
-8831-0.044-0.3788No
133ANAPC4ANAPC4
Entrez,  Source
anaphase promoting complex subunit 48855-0.045-0.3784No
134REPIN1REPIN1
Entrez,  Source
replication initiator 18879-0.045-0.3780No
135RB1RB1
Entrez,  Source
retinoblastoma 1 (including osteosarcoma)9017-0.048-0.3862No
136MORF4L2MORF4L2
Entrez,  Source
mortality factor 4 like 29092-0.049-0.3896No
137SNRPNSNRPN
Entrez,  Source
small nuclear ribonucleoprotein polypeptide N9094-0.049-0.3874No
138RALYRALY
Entrez,  Source
RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))9125-0.049-0.3873No
139GRINL1AGRINL1A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A9169-0.050-0.3883No
140TMPOTMPO
Entrez,  Source
thymopoietin9189-0.050-0.3873No
141HDAC6HDAC6
Entrez,  Source
histone deacetylase 69263-0.052-0.3904No
142PSEN2PSEN2
Entrez,  Source
presenilin 2 (Alzheimer disease 4)9275-0.052-0.3888No
143NF2NF2
Entrez,  Source
neurofibromin 2 (bilateral acoustic neuroma)9310-0.053-0.3889No
144HOXC10HOXC10
Entrez,  Source
homeobox C109320-0.053-0.3871No
145CDC23CDC23
Entrez,  Source
CDC23 (cell division cycle 23, yeast, homolog)9367-0.054-0.3881No
146TERTTERT
Entrez,  Source
telomerase reverse transcriptase9493-0.056-0.3950No
147PAX8PAX8
Entrez,  Source
paired box gene 89509-0.056-0.3935No
148SMNDC1SMNDC1
Entrez,  Source
survival motor neuron domain containing 19516-0.056-0.3913No
149PHBPHB
Entrez,  Source
prohibitin9567-0.057-0.3924No
150DHX8DHX8
Entrez,  Source
DEAH (Asp-Glu-Ala-His) box polypeptide 89578-0.057-0.3905No
151SREBF1SREBF1
Entrez,  Source
sterol regulatory element binding transcription factor 19603-0.058-0.3896No
152GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)9613-0.058-0.3875No
153TPRTPR
Entrez,  Source
translocated promoter region (to activated MET oncogene)9660-0.059-0.3882No
154RPL3RPL3
Entrez,  Source
ribosomal protein L39736-0.061-0.3911No
155XRCC6XRCC6
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa)9780-0.062-0.3915No
156GEMIN6GEMIN6
Entrez,  Source
gem (nuclear organelle) associated protein 69841-0.063-0.3931No
157NKX2-5NKX2-5
Entrez,  Source
NK2 transcription factor related, locus 5 (Drosophila)9922-0.065-0.3961No
158FGF18FGF18
Entrez,  Source
fibroblast growth factor 189933-0.065-0.3938No
159HMGA1HMGA1
Entrez,  Source
high mobility group AT-hook 19950-0.065-0.3919No
160SENP2SENP2
Entrez,  Source
SUMO1/sentrin/SMT3 specific peptidase 210008-0.066-0.3932No
161SMC3SMC3
Entrez,  Source
structural maintenance of chromosomes 310069-0.068-0.3945No
162PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 110104-0.068-0.3939No
163RAE1RAE1
Entrez,  Source
RAE1 RNA export 1 homolog (S. pombe)10200-0.071-0.3978No
164KPNA1KPNA1
Entrez,  Source
karyopherin alpha 1 (importin alpha 5)10204-0.071-0.3947No
165SYMPKSYMPK
Entrez,  Source
symplekin10270-0.072-0.3963No
166NAP1L1NAP1L1
Entrez,  Source
nucleosome assembly protein 1-like 110281-0.072-0.3936No
167MPGMPG
Entrez,  Source
N-methylpurine-DNA glycosylase10506-0.078-0.4071No
168HES6HES6
Entrez,  Source
hairy and enhancer of split 6 (Drosophila)10589-0.080-0.4096Yes
169RANGAP1RANGAP1
Entrez,  Source
Ran GTPase activating protein 110603-0.080-0.4068Yes
170RPA2RPA2
Entrez,  Source
replication protein A2, 32kDa10679-0.082-0.4086Yes
171SFRS2SFRS2
Entrez,  Source
splicing factor, arginine/serine-rich 210691-0.082-0.4056Yes
172KPNA3KPNA3
Entrez,  Source
karyopherin alpha 3 (importin alpha 4)10744-0.084-0.4056Yes
173HNRPKHNRPK
Entrez,  Source
heterogeneous nuclear ribonucleoprotein K10815-0.086-0.4069Yes
174PSEN1PSEN1
Entrez,  Source
presenilin 1 (Alzheimer disease 3)10866-0.087-0.4066Yes
175CLOCKCLOCK
Entrez,  Source
clock homolog (mouse)10868-0.087-0.4025Yes
176CCNHCCNH
Entrez,  Source
cyclin H10928-0.089-0.4028Yes
177SNRPBSNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B110937-0.089-0.3992Yes
178GTF2F1GTF2F1
Entrez,  Source
general transcription factor IIF, polypeptide 1, 74kDa10980-0.090-0.3982Yes
179TOP2ATOP2A
Entrez,  Source
topoisomerase (DNA) II alpha 170kDa11066-0.092-0.4003Yes
180TFIP11TFIP11
Entrez,  Source
tuftelin interacting protein 1111088-0.093-0.3975Yes
181RPL11RPL11
Entrez,  Source
ribosomal protein L1111095-0.093-0.3936Yes
182IMP4IMP4
Entrez,  Source
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)11124-0.094-0.3913Yes
183DHCR7DHCR7
Entrez,  Source
7-dehydrocholesterol reductase11141-0.094-0.3881Yes
184LYARLYAR
Entrez,  Source
-11179-0.095-0.3864Yes
185GTF3C1GTF3C1
Entrez,  Source
general transcription factor IIIC, polypeptide 1, alpha 220kDa11181-0.095-0.3820Yes
186HDAC2HDAC2
Entrez,  Source
histone deacetylase 211182-0.095-0.3775Yes
187RBM39RBM39
Entrez,  Source
RNA binding motif protein 3911211-0.096-0.3751Yes
188DKC1DKC1
Entrez,  Source
dyskeratosis congenita 1, dyskerin11229-0.096-0.3718Yes
189ARID1BARID1B
Entrez,  Source
AT rich interactive domain 1B (SWI1-like)11241-0.097-0.3681Yes
190EIF5AEIF5A
Entrez,  Source
eukaryotic translation initiation factor 5A11294-0.098-0.3674Yes
191LMNB1LMNB1
Entrez,  Source
lamin B111330-0.100-0.3653Yes
192TP53TP53
Entrez,  Source
tumor protein p53 (Li-Fraumeni syndrome)11337-0.100-0.3611Yes
193NUP153NUP153
Entrez,  Source
nucleoporin 153kDa11338-0.100-0.3563Yes
194EFTUD2EFTUD2
Entrez,  Source
elongation factor Tu GTP binding domain containing 211362-0.101-0.3533Yes
195MED4MED4
Entrez,  Source
mediator of RNA polymerase II transcription, subunit 4 homolog (S. cerevisiae)11379-0.101-0.3498Yes
196GUCY2FGUCY2F
Entrez,  Source
guanylate cyclase 2F, retinal11499-0.106-0.3538Yes
197RPL35RPL35
Entrez,  Source
ribosomal protein L3511505-0.106-0.3492Yes
198PRPF8PRPF8
Entrez,  Source
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)11569-0.108-0.3489Yes
199GNL3GNL3
Entrez,  Source
guanine nucleotide binding protein-like 3 (nucleolar)11580-0.109-0.3445Yes
200ATXN3ATXN3
Entrez,  Source
ataxin 311788-0.116-0.3549Yes
201ACTL6AACTL6A
Entrez,  Source
actin-like 6A11816-0.118-0.3514Yes
202FMR1FMR1
Entrez,  Source
fragile X mental retardation 111863-0.120-0.3492Yes
203BNIP1BNIP1
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 111896-0.121-0.3459Yes
204RPP40RPP40
Entrez,  Source
ribonuclease P 40kDa subunit11919-0.122-0.3418Yes
205MATR3MATR3
Entrez,  Source
matrin 311949-0.124-0.3381Yes
206NAP1L3NAP1L3
Entrez,  Source
nucleosome assembly protein 1-like 311966-0.125-0.3335Yes
207XPO7XPO7
Entrez,  Source
exportin 712002-0.127-0.3302Yes
208TAF2TAF2
Entrez,  Source
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa12029-0.128-0.3261Yes
209DNMT3ADNMT3A
Entrez,  Source
DNA (cytosine-5-)-methyltransferase 3 alpha12031-0.128-0.3201Yes
210POLR3CPOLR3C
Entrez,  Source
polymerase (RNA) III (DNA directed) polypeptide C (62kD)12038-0.128-0.3145Yes
211GTF2H4GTF2H4
Entrez,  Source
general transcription factor IIH, polypeptide 4, 52kDa12050-0.129-0.3093Yes
212MRPL19MRPL19
Entrez,  Source
mitochondrial ribosomal protein L1912073-0.130-0.3048Yes
213RPP38RPP38
Entrez,  Source
ribonuclease P/MRP 38kDa subunit12108-0.132-0.3011Yes
214RPS19RPS19
Entrez,  Source
ribosomal protein S1912113-0.132-0.2952Yes
215NOC4LNOC4L
Entrez,  Source
nucleolar complex associated 4 homolog (S. cerevisiae)12118-0.133-0.2892Yes
216SF3A3SF3A3
Entrez,  Source
splicing factor 3a, subunit 3, 60kDa12128-0.133-0.2836Yes
217SIP1SIP1
Entrez,  Source
survival of motor neuron protein interacting protein 112190-0.136-0.2818Yes
218NUP88NUP88
Entrez,  Source
nucleoporin 88kDa12191-0.136-0.2754Yes
219MKI67IPMKI67IP
Entrez,  Source
MKI67 (FHA domain) interacting nucleolar phosphoprotein12289-0.142-0.2761Yes
220NUFIP1NUFIP1
Entrez,  Source
nuclear fragile X mental retardation protein interacting protein 112295-0.142-0.2698Yes
221RUVBL2RUVBL2
Entrez,  Source
RuvB-like 2 (E. coli)12316-0.144-0.2645Yes
222MYBBP1AMYBBP1A
Entrez,  Source
MYB binding protein (P160) 1a12333-0.144-0.2589Yes
223DDX56DDX56
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5612337-0.145-0.2523Yes
224UBTFUBTF
Entrez,  Source
upstream binding transcription factor, RNA polymerase I12345-0.145-0.2459Yes
225LBRLBR
Entrez,  Source
lamin B receptor12381-0.148-0.2416Yes
226NCBP1NCBP1
Entrez,  Source
nuclear cap binding protein subunit 1, 80kDa12406-0.149-0.2364Yes
227NUP107NUP107
Entrez,  Source
nucleoporin 107kDa12429-0.150-0.2310Yes
228KPNB1KPNB1
Entrez,  Source
karyopherin (importin) beta 112430-0.150-0.2239Yes
229HNRPFHNRPF
Entrez,  Source
heterogeneous nuclear ribonucleoprotein F12438-0.150-0.2174Yes
230NUTF2NUTF2
Entrez,  Source
nuclear transport factor 212441-0.151-0.2104Yes
231CIRH1ACIRH1A
Entrez,  Source
cirrhosis, autosomal recessive 1A (cirhin)12459-0.152-0.2045Yes
232NOL5ANOL5A
Entrez,  Source
nucleolar protein 5A (56kDa with KKE/D repeat)12500-0.155-0.2003Yes
233NPM1NPM1
Entrez,  Source
nucleophosmin (nucleolar phosphoprotein B23, numatrin)12505-0.155-0.1932Yes
234LRPPRCLRPPRC
Entrez,  Source
leucine-rich PPR-motif containing12556-0.159-0.1895Yes
235PPIGPPIG
Entrez,  Source
peptidylprolyl isomerase G (cyclophilin G)12641-0.167-0.1880Yes
236NUAK2NUAK2
Entrez,  Source
NUAK family, SNF1-like kinase, 212649-0.168-0.1806Yes
237DYRK1ADYRK1A
Entrez,  Source
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A12773-0.181-0.1815Yes
238HNRPH1HNRPH1
Entrez,  Source
heterogeneous nuclear ribonucleoprotein H1 (H)12830-0.189-0.1768Yes
239SNUPNSNUPN
Entrez,  Source
snurportin 112833-0.189-0.1680Yes
240TDGTDG
Entrez,  Source
thymine-DNA glycosylase12893-0.199-0.1631Yes
241SLC29A2SLC29A2
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 212900-0.200-0.1541Yes
242FUSIP1FUSIP1
Entrez,  Source
FUS interacting protein (serine/arginine-rich) 112913-0.201-0.1455Yes
243NCLNCL
Entrez,  Source
nucleolin12916-0.202-0.1361Yes
244TIMELESSTIMELESS
Entrez,  Source
timeless homolog (Drosophila)12978-0.214-0.1306Yes
245XPO1XPO1
Entrez,  Source
exportin 1 (CRM1 homolog, yeast)12994-0.216-0.1215Yes
246RUVBL1RUVBL1
Entrez,  Source
RuvB-like 1 (E. coli)12996-0.217-0.1113Yes
247NOLC1NOLC1
Entrez,  Source
nucleolar and coiled-body phosphoprotein 113015-0.221-0.1022Yes
248MCM7MCM7
Entrez,  Source
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)13021-0.223-0.0921Yes
249NUP54NUP54
Entrez,  Source
nucleoporin 54kDa13023-0.224-0.0816Yes
250PTGER3PTGER3
Entrez,  Source
prostaglandin E receptor 3 (subtype EP3)13073-0.241-0.0739Yes
251SNRPASNRPA
Entrez,  Source
small nuclear ribonucleoprotein polypeptide A13076-0.242-0.0626Yes
252APTXAPTX
Entrez,  Source
aprataxin13079-0.242-0.0513Yes
253HNRPMHNRPM
Entrez,  Source
heterogeneous nuclear ribonucleoprotein M13088-0.247-0.0403Yes
254ASCC3L1ASCC3L1
Entrez,  Source
activating signal cointegrator 1 complex subunit 3-like 113101-0.253-0.0292Yes
255ARNTLARNTL
Entrez,  Source
aryl hydrocarbon receptor nuclear translocator-like13133-0.262-0.0192Yes
256MRE11AMRE11A
Entrez,  Source
MRE11 meiotic recombination 11 homolog A (S. cerevisiae)13244-0.339-0.0116Yes
257SDAD1SDAD1
Entrez,  Source
SDA1 domain containing 113284-0.4020.0044Yes
Table: GSEA details [plain text format]



Fig 2: NUCLEAR_PART   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NUCLEAR_PART: Random ES distribution   
Gene set null distribution of ES for NUCLEAR_PART