Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | POSITIVE_REGULATION_OF_PROTEIN_MODIFICATION_PROCESS |
| Enrichment Score (ES) | 0.70911396 |
| Normalized Enrichment Score (NES) | 1.8422054 |
| Nominal p-value | 0.0018656716 |
| FDR q-value | 0.019342886 |
| FWER p-Value | 0.871 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | CCND2 | CCND2 Entrez, Source | cyclin D2 | 10 | 0.885 | 0.4302 | Yes |
| 2 | TNK2 | TNK2 Entrez, Source | tyrosine kinase, non-receptor, 2 | 629 | 0.201 | 0.4816 | Yes |
| 3 | CCND3 | CCND3 Entrez, Source | cyclin D3 | 643 | 0.198 | 0.5771 | Yes |
| 4 | TGFB1 | TGFB1 Entrez, Source | transforming growth factor, beta 1 (Camurati-Engelmann disease) | 821 | 0.166 | 0.6447 | Yes |
| 5 | PPARGC1A | PPARGC1A Entrez, Source | peroxisome proliferative activated receptor, gamma, coactivator 1, alpha | 1181 | 0.130 | 0.6809 | Yes |
| 6 | BMP4 | BMP4 Entrez, Source | bone morphogenetic protein 4 | 1506 | 0.108 | 0.7091 | Yes |
| 7 | CCND1 | CCND1 Entrez, Source | cyclin D1 | 2668 | 0.063 | 0.6527 | No |
| 8 | CLCF1 | CLCF1 Entrez, Source | cardiotrophin-like cytokine factor 1 | 2926 | 0.057 | 0.6610 | No |
| 9 | IL5 | IL5 Entrez, Source | interleukin 5 (colony-stimulating factor, eosinophil) | 3140 | 0.051 | 0.6699 | No |
| 10 | HCLS1 | HCLS1 Entrez, Source | hematopoietic cell-specific Lyn substrate 1 | 4075 | 0.031 | 0.6151 | No |
| 11 | BCL10 | BCL10 Entrez, Source | B-cell CLL/lymphoma 10 | 4947 | 0.016 | 0.5575 | No |
| 12 | IL3 | IL3 Entrez, Source | interleukin 3 (colony-stimulating factor, multiple) | 5167 | 0.012 | 0.5470 | No |
| 13 | CD80 | CD80 Entrez, Source | CD80 molecule | 5469 | 0.008 | 0.5282 | No |
| 14 | CD81 | CD81 Entrez, Source | CD81 molecule | 6049 | -0.001 | 0.4850 | No |
| 15 | STUB1 | STUB1 Entrez, Source | STIP1 homology and U-box containing protein 1 | 6444 | -0.007 | 0.4588 | No |
| 16 | BRCA1 | BRCA1 Entrez, Source | breast cancer 1, early onset | 6790 | -0.012 | 0.4387 | No |
| 17 | ATG7 | ATG7 Entrez, Source | ATG7 autophagy related 7 homolog (S. cerevisiae) | 6860 | -0.013 | 0.4399 | No |
| 18 | UBE2N | UBE2N Entrez, Source | ubiquitin-conjugating enzyme E2N (UBC13 homolog, yeast) | 7534 | -0.023 | 0.4006 | No |
| 19 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 7646 | -0.025 | 0.4044 | No |
| 20 | LYN | LYN Entrez, Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 9007 | -0.047 | 0.3254 | No |
