Details for gene set PROTEINACEOUS_EXTRACELLULAR

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	PROTEINACEOUS_EXTRACELLULAR_MATRIX
Enrichment Score (ES)	0.6617447
Normalized Enrichment Score (NES)	2.1962883
Nominal p-value	0.0
FDR q-value	4.0738372E-4
FWER p-Value	0.0040

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	6	1.154	0.1352	Yes
2	COL3A1	COL3A1 Entrez, Source	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	21	0.785	0.2266	Yes
3	CTGF	CTGF Entrez, Source	connective tissue growth factor	27	0.757	0.3152	Yes
4	COL5A2	COL5A2 Entrez, Source	collagen, type V, alpha 2	34	0.714	0.3987	Yes
5	MGP	MGP Entrez, Source	matrix Gla protein	52	0.634	0.4719	Yes
6	PRELP	PRELP Entrez, Source	proline/arginine-rich end leucine-rich repeat protein	204	0.383	0.5056	Yes
7	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	252	0.342	0.5423	Yes
8	LAMB2	LAMB2 Entrez, Source	laminin, beta 2 (laminin S)	433	0.249	0.5580	Yes
9	EFEMP2	EFEMP2 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 2	482	0.234	0.5819	Yes
10	SGCE	SGCE Entrez, Source	sarcoglycan, epsilon	650	0.197	0.5926	Yes
11	USH2A	USH2A Entrez, Source	Usher syndrome 2A (autosomal recessive, mild)	684	0.187	0.6121	Yes
12	TGFB1	TGFB1 Entrez, Source	transforming growth factor, beta 1 (Camurati-Engelmann disease)	821	0.166	0.6215	Yes
13	COLQ	COLQ Entrez, Source	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	888	0.157	0.6350	Yes
14	ADAMTS5	ADAMTS5 Entrez, Source	ADAM metallopeptidase with thrombospondin type 1 motif, 5 (aggrecanase-2)	1052	0.141	0.6393	Yes
15	MMP11	MMP11 Entrez, Source	matrix metallopeptidase 11 (stromelysin 3)	1078	0.138	0.6537	Yes
16	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	1241	0.124	0.6561	Yes
17	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	1349	0.116	0.6617	Yes
18	FBN1	FBN1 Entrez, Source	fibrillin 1	1643	0.100	0.6515	Yes
19	COL11A1	COL11A1 Entrez, Source	collagen, type XI, alpha 1	1749	0.095	0.6548	Yes
20	COL4A4	COL4A4 Entrez, Source	collagen, type IV, alpha 4	1802	0.093	0.6617	Yes
21	COL18A1	COL18A1 Entrez, Source	collagen, type XVIII, alpha 1	1942	0.087	0.6615	No
22	IMPG1	IMPG1 Entrez, Source	interphotoreceptor matrix proteoglycan 1	2202	0.077	0.6511	No
23	TINAG	TINAG Entrez, Source	tubulointerstitial nephritis antigen	2372	0.072	0.6469	No
24	COL5A1	COL5A1 Entrez, Source	collagen, type V, alpha 1	2660	0.063	0.6327	No
25	SPG7	SPG7 Entrez, Source	spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)	2861	0.059	0.6245	No
26	SGCG	SGCG Entrez, Source	sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)	2905	0.057	0.6280	No
27	LTBP2	LTBP2 Entrez, Source	latent transforming growth factor beta binding protein 2	3107	0.052	0.6190	No
28	DSPP	DSPP Entrez, Source	dentin sialophosphoprotein	3167	0.050	0.6205	No
29	MEPE	MEPE Entrez, Source	matrix, extracellular phosphoglycoprotein with ASARM motif (bone)	3410	0.045	0.6075	No
30	COL9A1	COL9A1 Entrez, Source	collagen, type IX, alpha 1	3413	0.045	0.6126	No
31	COL16A1	COL16A1 Entrez, Source	collagen, type XVI, alpha 1	3530	0.042	0.6089	No
32	ECM1	ECM1 Entrez, Source	extracellular matrix protein 1	3867	0.035	0.5877	No
33	FBLN2	FBLN2 Entrez, Source	fibulin 2	4053	0.032	0.5776	No
34	LAMA3	LAMA3 Entrez, Source	laminin, alpha 3	4300	0.027	0.5623	No
35	DMP1	DMP1 Entrez, Source	dentin matrix acidic phosphoprotein	4341	0.026	0.5624	No
36	LUM	LUM Entrez, Source	lumican	4533	0.023	0.5507	No
37	MUC5AC	MUC5AC Entrez, Source	mucin 5AC, oligomeric mucus/gel-forming	6169	-0.003	0.4279	No
38	MMP10	MMP10 Entrez, Source	matrix metallopeptidase 10 (stromelysin 2)	6646	-0.010	0.3932	No
39	CHI3L1	CHI3L1 Entrez, Source	chitinase 3-like 1 (cartilage glycoprotein-39)	6833	-0.013	0.3807	No
40	LTBP4	LTBP4 Entrez, Source	latent transforming growth factor beta binding protein 4	7185	-0.018	0.3564	No
41	HAPLN1	HAPLN1 Entrez, Source	hyaluronan and proteoglycan link protein 1	7300	-0.020	0.3501	No
42	MATN1	MATN1 Entrez, Source	matrilin 1, cartilage matrix protein	7327	-0.020	0.3505	No
43	FBN2	FBN2 Entrez, Source	fibrillin 2 (congenital contractural arachnodactyly)	7354	-0.020	0.3509	No
44	COL15A1	COL15A1 Entrez, Source	collagen, type XV, alpha 1	7379	-0.021	0.3516	No
45	FBLN5	FBLN5 Entrez, Source	fibulin 5	8019	-0.031	0.3071	No
46	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	8124	-0.033	0.3032	No
47	COMP	COMP Entrez, Source	cartilage oligomeric matrix protein	8125	-0.033	0.3070	No
48	FMOD	FMOD Entrez, Source	fibromodulin	8247	-0.035	0.3020	No
49	THBS4	THBS4 Entrez, Source	thrombospondin 4	8277	-0.035	0.3040	No
50	CHAD	CHAD Entrez, Source	chondroadherin	9330	-0.053	0.2310	No
51	COL10A1	COL10A1 Entrez, Source	collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)	9784	-0.062	0.2042	No
52	SMC3	SMC3 Entrez, Source	structural maintenance of chromosomes 3	10069	-0.068	0.1908	No
53	IMPG2	IMPG2 Entrez, Source	interphotoreceptor matrix proteoglycan 2	10421	-0.075	0.1732	No
54	CAV3	CAV3 Entrez, Source	caveolin 3	10854	-0.087	0.1509	No
55	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12470	-0.153	0.0474	No
56	COL5A3	COL5A3 Entrez, Source	collagen, type V, alpha 3	12502	-0.155	0.0632	No