Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | RESPONSE_TO_BIOTIC_STIMULUS |
| Enrichment Score (ES) | 0.556271 |
| Normalized Enrichment Score (NES) | 1.7999126 |
| Nominal p-value | 0.0017301039 |
| FDR q-value | 0.025769824 |
| FWER p-Value | 0.971 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | PGLYRP1 | PGLYRP1 Entrez, Source | peptidoglycan recognition protein 1 | 16 | 0.825 | 0.1353 | Yes |
| 2 | CD24 | CD24 Entrez, Source | CD24 molecule | 26 | 0.771 | 0.2621 | Yes |
| 3 | SERPINH1 | SERPINH1 Entrez, Source | serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) | 184 | 0.403 | 0.3169 | Yes |
| 4 | TOR1B | TOR1B Entrez, Source | torsin family 1, member B (torsin B) | 314 | 0.297 | 0.3562 | Yes |
| 5 | FGR | FGR Entrez, Source | Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog | 390 | 0.264 | 0.3943 | Yes |
| 6 | DNAJB4 | DNAJB4 Entrez, Source | DnaJ (Hsp40) homolog, subfamily B, member 4 | 410 | 0.256 | 0.4352 | Yes |
| 7 | HERPUD1 | HERPUD1 Entrez, Source | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 | 448 | 0.245 | 0.4730 | Yes |
| 8 | IFNGR1 | IFNGR1 Entrez, Source | interferon gamma receptor 1 | 611 | 0.205 | 0.4946 | Yes |
| 9 | IL10 | IL10 Entrez, Source | interleukin 10 | 842 | 0.163 | 0.5043 | Yes |
| 10 | BNIP3L | BNIP3L Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 921 | 0.154 | 0.5239 | Yes |
| 11 | PTPRC | PTPRC Entrez, Source | protein tyrosine phosphatase, receptor type, C | 1207 | 0.127 | 0.5235 | Yes |
| 12 | VAPB | VAPB Entrez, Source | VAMP (vesicle-associated membrane protein)-associated protein B and C | 1350 | 0.116 | 0.5320 | Yes |
| 13 | TOR1A | TOR1A Entrez, Source | torsin family 1, member A (torsin A) | 1465 | 0.110 | 0.5416 | Yes |
| 14 | DMBT1 | DMBT1 Entrez, Source | deleted in malignant brain tumors 1 | 1508 | 0.108 | 0.5563 | Yes |
| 15 | HSPB3 | HSPB3 Entrez, Source | heat shock 27kDa protein 3 | 1739 | 0.096 | 0.5548 | No |
| 16 | PRKRA | PRKRA Entrez, Source | protein kinase, interferon-inducible double stranded RNA dependent activator | 2319 | 0.073 | 0.5233 | No |
| 17 | BNIP3 | BNIP3 Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3 | 2391 | 0.071 | 0.5297 | No |
| 18 | CCL11 | CCL11 Entrez, Source | chemokine (C-C motif) ligand 11 | 2565 | 0.066 | 0.5276 | No |
| 19 | DNAJC4 | DNAJC4 Entrez, Source | DnaJ (Hsp40) homolog, subfamily C, member 4 | 2804 | 0.060 | 0.5196 | No |
| 20 | EIF2AK3 | EIF2AK3 Entrez, Source | eukaryotic translation initiation factor 2-alpha kinase 3 | 2812 | 0.060 | 0.5290 | No |
| 21 | CHIA | CHIA Entrez, Source | chitinase, acidic | 3614 | 0.041 | 0.4754 | No |
| 22 | ISG20 | ISG20 Entrez, Source | interferon stimulated exonuclease gene 20kDa | 3732 | 0.038 | 0.4729 | No |
| 23 | SPN | SPN Entrez, Source | sialophorin (leukosialin, CD43) | 4002 | 0.033 | 0.4581 | No |
| 24 | BCL10 | BCL10 Entrez, Source | B-cell CLL/lymphoma 10 | 4947 | 0.016 | 0.3897 | No |
| 25 | DEFB103A | DEFB103A Entrez, Source | defensin, beta 103A | 4959 | 0.016 | 0.3915 | No |
| 26 | CXCL12 | CXCL12 Entrez, Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 5302 | 0.010 | 0.3674 | No |
| 27 | TARBP2 | TARBP2 Entrez, Source | Tar (HIV-1) RNA binding protein 2 | 5848 | 0.002 | 0.3268 | No |
| 28 | TNF | TNF Entrez, Source | tumor necrosis factor (TNF superfamily, member 2) | 5914 | 0.001 | 0.3221 | No |
| 29 | CXCR4 | CXCR4 Entrez, Source | chemokine (C-X-C motif) receptor 4 | 5981 | 0.000 | 0.3172 | No |
| 30 | CCL22 | CCL22 Entrez, Source | chemokine (C-C motif) ligand 22 | 6089 | -0.001 | 0.3094 | No |
| 31 | TXNDC4 | TXNDC4 Entrez, Source | thioredoxin domain containing 4 (endoplasmic reticulum) | 6328 | -0.005 | 0.2923 | No |
| 32 | BCL2 | BCL2 Entrez, Source | B-cell CLL/lymphoma 2 | 6363 | -0.006 | 0.2907 | No |
| 33 | CCL4 | CCL4 Entrez, Source | chemokine (C-C motif) ligand 4 | 6591 | -0.009 | 0.2751 | No |
| 34 | IL12B | IL12B Entrez, Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 6624 | -0.009 | 0.2743 | No |
| 35 | DUOX2 | DUOX2 Entrez, Source | dual oxidase 2 | 6791 | -0.012 | 0.2638 | No |
| 36 | VCP | VCP Entrez, Source | valosin-containing protein | 7037 | -0.016 | 0.2479 | No |
| 37 | HSPB7 | HSPB7 Entrez, Source | heat shock 27kDa protein family, member 7 (cardiovascular) | 7043 | -0.016 | 0.2501 | No |
| 38 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 7646 | -0.025 | 0.2090 | No |
| 39 | IRF7 | IRF7 Entrez, Source | interferon regulatory factor 7 | 7693 | -0.026 | 0.2098 | No |
| 40 | DNAJA1 | DNAJA1 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 1 | 8213 | -0.034 | 0.1764 | No |
| 41 | CCL5 | CCL5 Entrez, Source | chemokine (C-C motif) ligand 5 | 8913 | -0.046 | 0.1313 | No |
| 42 | GSK3B | GSK3B Entrez, Source | glycogen synthase kinase 3 beta | 8958 | -0.047 | 0.1357 | No |
| 43 | STAB2 | STAB2 Entrez, Source | stabilin 2 | 9144 | -0.050 | 0.1300 | No |
| 44 | CAMP | CAMP Entrez, Source | cathelicidin antimicrobial peptide | 9822 | -0.063 | 0.0894 | No |
| 45 | HSPE1 | HSPE1 Entrez, Source | heat shock 10kDa protein 1 (chaperonin 10) | 9837 | -0.063 | 0.0988 | No |
| 46 | HSPB1 | HSPB1 Entrez, Source | heat shock 27kDa protein 1 | 10057 | -0.068 | 0.0935 | No |
| 47 | ABCE1 | ABCE1 Entrez, Source | ATP-binding cassette, sub-family E (OABP), member 1 | 11152 | -0.095 | 0.0268 | No |
| 48 | HSPH1 | HSPH1 Entrez, Source | heat shock 105kDa/110kDa protein 1 | 11297 | -0.099 | 0.0323 | No |
| 49 | TP53 | TP53 Entrez, Source | tumor protein p53 (Li-Fraumeni syndrome) | 11337 | -0.100 | 0.0459 | No |
| 50 | BANF1 | BANF1 Entrez, Source | barrier to autointegration factor 1 | 11715 | -0.114 | 0.0363 | No |
| 51 | HSPA2 | HSPA2 Entrez, Source | heat shock 70kDa protein 2 | 11748 | -0.115 | 0.0529 | No |
| 52 | FOSL1 | FOSL1 Entrez, Source | FOS-like antigen 1 | 11938 | -0.123 | 0.0590 | No |
| 53 | LALBA | LALBA Entrez, Source | lactalbumin, alpha- | 12107 | -0.132 | 0.0682 | No |
| 54 | IFI44 | IFI44 Entrez, Source | interferon-induced protein 44 | 12405 | -0.149 | 0.0705 | No |
