Details for gene set SANA_TNFA_ENDOTHELIAL

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	SANA_TNFA_ENDOTHELIAL_DN
Enrichment Score (ES)	0.556115
Normalized Enrichment Score (NES)	1.8428783
Nominal p-value	0.0017921147
FDR q-value	0.01934165
FWER p-Value	0.869

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ANXA1	ANXA1 Entrez, Source	annexin A1	11	0.884	0.1335	Yes
2	CTGF	CTGF Entrez, Source	connective tissue growth factor	27	0.757	0.2474	Yes
3	BGN	BGN Entrez, Source	biglycan	175	0.408	0.2984	Yes
4	DDR1	DDR1 Entrez, Source	discoidin domain receptor family, member 1	190	0.399	0.3580	Yes
5	PEA15	PEA15 Entrez, Source	phosphoprotein enriched in astrocytes 15	279	0.322	0.4003	Yes
6	TMSB4X	TMSB4X Entrez, Source	thymosin, beta 4, X-linked	315	0.295	0.4425	Yes
7	DNAJB4	DNAJB4 Entrez, Source	DnaJ (Hsp40) homolog, subfamily B, member 4	410	0.256	0.4743	Yes
8	RGS4	RGS4 Entrez, Source	regulator of G-protein signalling 4	454	0.244	0.5081	Yes
9	ALDH1A1	ALDH1A1 Entrez, Source	aldehyde dehydrogenase 1 family, member A1	739	0.178	0.5138	Yes
10	PALMD	PALMD Entrez, Source	palmdelphin	986	0.148	0.5178	Yes
11	PHLDA1	PHLDA1 Entrez, Source	pleckstrin homology-like domain, family A, member 1	1221	0.126	0.5193	Yes
12	EPAS1	EPAS1 Entrez, Source	endothelial PAS domain protein 1	1321	0.118	0.5299	Yes
13	NFIB	NFIB Entrez, Source	nuclear factor I/B	1582	0.103	0.5260	Yes
14	TGM2	TGM2 Entrez, Source	transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)	1650	0.100	0.5362	Yes
15	HTR1B	HTR1B Entrez, Source	5-hydroxytryptamine (serotonin) receptor 1B	1698	0.097	0.5474	Yes
16	ARHGDIB	ARHGDIB Entrez, Source	Rho GDP dissociation inhibitor (GDI) beta	1774	0.094	0.5561	Yes
17	SDPR	SDPR Entrez, Source	serum deprivation response (phosphatidylserine binding protein)	2231	0.076	0.5334	No
18	PCTP	PCTP Entrez, Source	phosphatidylcholine transfer protein	2823	0.059	0.4980	No
19	PGAM2	PGAM2 Entrez, Source	phosphoglycerate mutase 2 (muscle)	3169	0.050	0.4796	No
20	CCNA1	CCNA1 Entrez, Source	cyclin A1	3333	0.046	0.4744	No
21	JAG2	JAG2 Entrez, Source	jagged 2	3370	0.046	0.4787	No
22	KDR	KDR Entrez, Source	kinase insert domain receptor (a type III receptor tyrosine kinase)	3567	0.041	0.4702	No
23	CLU	CLU Entrez, Source	clusterin	3739	0.038	0.4631	No
24	ANXA2	ANXA2 Entrez, Source	annexin A2	3949	0.034	0.4525	No
25	NQO1	NQO1 Entrez, Source	NAD(P)H dehydrogenase, quinone 1	4179	0.030	0.4397	No
26	ANTXR1	ANTXR1 Entrez, Source	anthrax toxin receptor 1	4328	0.027	0.4327	No
27	ARL6IP1	ARL6IP1 Entrez, Source	ADP-ribosylation factor-like 6 interacting protein 1	4332	0.027	0.4365	No
28	CAPNS1	CAPNS1 Entrez, Source	calpain, small subunit 1	4360	0.026	0.4384	No
29	PRKCH	PRKCH Entrez, Source	protein kinase C, eta	4972	0.016	0.3948	No
30	CALCRL	CALCRL Entrez, Source	calcitonin receptor-like	4973	0.016	0.3972	No
31	GBA2	GBA2 Entrez, Source	glucosidase, beta (bile acid) 2	5370	0.009	0.3688	No
32	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	5602	0.006	0.3523	No
33	APLN	APLN Entrez, Source	apelin, AGTRL1 ligand	6665	-0.010	0.2739	No
34	ACE	ACE Entrez, Source	angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	7112	-0.017	0.2429	No
35	EMCN	EMCN Entrez, Source	endomucin	7455	-0.022	0.2205	No
36	MTUS1	MTUS1 Entrez, Source	mitochondrial tumor suppressor 1	7482	-0.022	0.2219	No
37	NT5E	NT5E Entrez, Source	5'-nucleotidase, ecto (CD73)	7715	-0.026	0.2084	No
38	ATP5A1	ATP5A1 Entrez, Source	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	7872	-0.028	0.2010	No
39	TPT1	TPT1 Entrez, Source	tumor protein, translationally-controlled 1	7952	-0.030	0.1996	No
40	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	8086	-0.032	0.1945	No
41	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	8124	-0.033	0.1967	No
42	VWF	VWF Entrez, Source	von Willebrand factor	8376	-0.037	0.1834	No
43	DNAH11	DNAH11 Entrez, Source	dynein, axonemal, heavy chain 11	8489	-0.039	0.1809	No
44	ARL5A	ARL5A Entrez, Source	ADP-ribosylation factor-like 5A	8623	-0.041	0.1770	No
45	TXNIP	TXNIP Entrez, Source	thioredoxin interacting protein	8667	-0.041	0.1801	No
46	IGFBP4	IGFBP4 Entrez, Source	insulin-like growth factor binding protein 4	9082	-0.049	0.1563	No
47	FHL2	FHL2 Entrez, Source	four and a half LIM domains 2	9173	-0.050	0.1572	No
48	ATP1B3	ATP1B3 Entrez, Source	ATPase, Na+/K+ transporting, beta 3 polypeptide	9230	-0.051	0.1607	No
49	KCNH2	KCNH2 Entrez, Source	potassium voltage-gated channel, subfamily H (eag-related), member 2	9256	-0.052	0.1667	No
50	RPS3A	RPS3A Entrez, Source	ribosomal protein S3A	10424	-0.075	0.0904	No
51	SMYD2	SMYD2 Entrez, Source	SET and MYND domain containing 2	10645	-0.081	0.0861	No
52	HDAC2	HDAC2 Entrez, Source	histone deacetylase 2	11182	-0.095	0.0602	No
53	SFRS7	SFRS7 Entrez, Source	splicing factor, arginine/serine-rich 7, 35kDa	11272	-0.098	0.0684	No
54	ITGA6	ITGA6 Entrez, Source	integrin, alpha 6	11513	-0.106	0.0665	No
55	CRIP2	CRIP2 Entrez, Source	cysteine-rich protein 2	13307	-0.468	0.0026	No