Details for gene set V$HNF3ALPHA

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	V$HNF3ALPHA_Q6
Enrichment Score (ES)	0.5060184
Normalized Enrichment Score (NES)	1.7955706
Nominal p-value	0.0
FDR q-value	0.026342405
FWER p-Value	0.973

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	MAF	MAF Entrez, Source	v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)	43	0.675	0.0738	Yes
2	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	87	0.537	0.1320	Yes
3	GPM6A	GPM6A Entrez, Source	glycoprotein M6A	130	0.466	0.1821	Yes
4	SGK	SGK Entrez, Source	serum/glucocorticoid regulated kinase	200	0.388	0.2211	Yes
5	TYRO3	TYRO3 Entrez, Source	TYRO3 protein tyrosine kinase	321	0.292	0.2454	Yes
6	FOXP1	FOXP1 Entrez, Source	forkhead box P1	375	0.270	0.2723	Yes
7	BAIAP2	BAIAP2 Entrez, Source	BAI1-associated protein 2	473	0.236	0.2919	Yes
8	MGLL	MGLL Entrez, Source	monoglyceride lipase	510	0.224	0.3148	Yes
9	CYR61	CYR61 Entrez, Source	cysteine-rich, angiogenic inducer, 61	600	0.206	0.3317	Yes
10	GDF8	GDF8 Entrez, Source	growth differentiation factor 8	623	0.202	0.3531	Yes
11	WNT4	WNT4 Entrez, Source	wingless-type MMTV integration site family, member 4	672	0.191	0.3712	Yes
12	SSH3	SSH3 Entrez, Source	slingshot homolog 3 (Drosophila)	792	0.170	0.3817	Yes
13	FABP4	FABP4 Entrez, Source	fatty acid binding protein 4, adipocyte	884	0.158	0.3929	Yes
14	PRKAG1	PRKAG1 Entrez, Source	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	942	0.152	0.4059	Yes
15	NFIA	NFIA Entrez, Source	nuclear factor I/A	948	0.151	0.4228	Yes
16	PALMD	PALMD Entrez, Source	palmdelphin	986	0.148	0.4370	Yes
17	CYP7A1	CYP7A1 Entrez, Source	cytochrome P450, family 7, subfamily A, polypeptide 1	1096	0.137	0.4443	Yes
18	TPP2	TPP2 Entrez, Source	tripeptidyl peptidase II	1139	0.133	0.4564	Yes
19	C1QA	C1QA Entrez, Source	complement component 1, q subcomponent, A chain	1220	0.126	0.4647	Yes
20	VTN	VTN Entrez, Source	vitronectin	1239	0.124	0.4776	Yes
21	PHEX	PHEX Entrez, Source	phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets)	1351	0.116	0.4825	Yes
22	TWIST1	TWIST1 Entrez, Source	twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila)	1380	0.115	0.4934	Yes
23	DUSP6	DUSP6 Entrez, Source	dual specificity phosphatase 6	1504	0.108	0.4965	Yes
24	SLC39A8	SLC39A8 Entrez, Source	solute carrier family 39 (zinc transporter), member 8	1573	0.104	0.5032	Yes
25	PLAG1	PLAG1 Entrez, Source	pleiomorphic adenoma gene 1	1816	0.092	0.4955	Yes
26	LCP2	LCP2 Entrez, Source	lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	1958	0.087	0.4948	Yes
27	CHRDL1	CHRDL1 Entrez, Source	chordin-like 1	2170	0.078	0.4878	Yes
28	OTX2	OTX2 Entrez, Source	orthodenticle homolog 2 (Drosophila)	2173	0.078	0.4966	Yes
29	TBXAS1	TBXAS1 Entrez, Source	thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)	2191	0.078	0.5042	Yes
30	SMARCA2	SMARCA2 Entrez, Source	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	2300	0.074	0.5045	Yes
31	FGF9	FGF9 Entrez, Source	fibroblast growth factor 9 (glia-activating factor)	2388	0.071	0.5060	Yes
32	CRH	CRH Entrez, Source	corticotropin releasing hormone	2685	0.063	0.4909	No
33	TRIB1	TRIB1 Entrez, Source	tribbles homolog 1 (Drosophila)	2792	0.060	0.4898	No
34	GBX2	GBX2 Entrez, Source	gastrulation brain homeobox 2	3075	0.052	0.4745	No
35	IL18	IL18 Entrez, Source	interleukin 18 (interferon-gamma-inducing factor)	3347	0.046	0.4593	No
36	NR4A3	NR4A3 Entrez, Source	nuclear receptor subfamily 4, group A, member 3	3417	0.045	0.4592	No
37	CDKN1A	CDKN1A Entrez, Source	cyclin-dependent kinase inhibitor 1A (p21, Cip1)	3506	0.043	0.4574	No
38	FOXA2	FOXA2 Entrez, Source	forkhead box A2	3659	0.040	0.4505	No
39	TGFB3	TGFB3 Entrez, Source	transforming growth factor, beta 3	3692	0.039	0.4525	No
40	BAMBI	BAMBI Entrez, Source	BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)	3945	0.034	0.4374	No
41	BOK	BOK Entrez, Source	BCL2-related ovarian killer	4026	0.032	0.4350	No
42	OTP	OTP Entrez, Source	orthopedia homolog (Drosophila)	4482	0.024	0.4034	No
43	SNX25	SNX25 Entrez, Source	sorting nexin 25	4902	0.017	0.3737	No
44	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	5051	0.014	0.3642	No
45	SMPX	SMPX Entrez, Source	small muscle protein, X-linked	5198	0.012	0.3545	No
46	ZG16	ZG16 Entrez, Source	-	5250	0.011	0.3519	No
47	NRAS	NRAS Entrez, Source	neuroblastoma RAS viral (v-ras) oncogene homolog	5695	0.004	0.3189	No
48	AKT3	AKT3 Entrez, Source	v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)	5706	0.004	0.3186	No
49	GNAZ	GNAZ Entrez, Source	guanine nucleotide binding protein (G protein), alpha z polypeptide	5810	0.003	0.3111	No
50	ACACA	ACACA Entrez, Source	acetyl-Coenzyme A carboxylase alpha	5939	0.001	0.3016	No
51	CALD1	CALD1 Entrez, Source	caldesmon 1	5970	0.001	0.2994	No
52	LUC7L	LUC7L Entrez, Source	LUC7-like (S. cerevisiae)	6242	-0.004	0.2794	No
53	SFRS12	SFRS12 Entrez, Source	splicing factor, arginine/serine-rich 12	6368	-0.006	0.2706	No
54	HSF2	HSF2 Entrez, Source	heat shock transcription factor 2	6714	-0.011	0.2458	No
55	PPP1CB	PPP1CB Entrez, Source	protein phosphatase 1, catalytic subunit, beta isoform	7228	-0.019	0.2092	No
56	HAPLN1	HAPLN1 Entrez, Source	hyaluronan and proteoglycan link protein 1	7300	-0.020	0.2061	No
57	PRDX5	PRDX5 Entrez, Source	peroxiredoxin 5	7418	-0.021	0.1997	No
58	GATA6	GATA6 Entrez, Source	GATA binding protein 6	7526	-0.023	0.1943	No
59	TAF5L	TAF5L Entrez, Source	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa	7536	-0.023	0.1962	No
60	ID1	ID1 Entrez, Source	inhibitor of DNA binding 1, dominant negative helix-loop-helix protein	7557	-0.023	0.1974	No
61	ITPKB	ITPKB Entrez, Source	inositol 1,4,5-trisphosphate 3-kinase B	7612	-0.024	0.1961	No
62	NOVA1	NOVA1 Entrez, Source	neuro-oncological ventral antigen 1	7658	-0.025	0.1956	No
63	PDCD4	PDCD4 Entrez, Source	programmed cell death 4 (neoplastic transformation inhibitor)	7707	-0.026	0.1949	No
64	RBP3	RBP3 Entrez, Source	retinol binding protein 3, interstitial	7847	-0.028	0.1876	No
65	GNAO1	GNAO1 Entrez, Source	guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	7919	-0.029	0.1856	No
66	PDE4D	PDE4D Entrez, Source	phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)	7982	-0.030	0.1844	No
67	ARHGEF2	ARHGEF2 Entrez, Source	rho/rac guanine nucleotide exchange factor (GEF) 2	8130	-0.033	0.1771	No
68	TNR	TNR Entrez, Source	tenascin R (restrictin, janusin)	8230	-0.034	0.1735	No
69	CP	CP Entrez, Source	ceruloplasmin (ferroxidase)	8305	-0.036	0.1721	No
70	PITX2	PITX2 Entrez, Source	paired-like homeodomain transcription factor 2	8349	-0.037	0.1730	No
71	ALDH9A1	ALDH9A1 Entrez, Source	aldehyde dehydrogenase 9 family, member A1	8536	-0.039	0.1635	No
72	ABI1	ABI1 Entrez, Source	abl-interactor 1	8608	-0.041	0.1627	No
73	H2AFY	H2AFY Entrez, Source	H2A histone family, member Y	8675	-0.042	0.1625	No
74	NEUROD2	NEUROD2 Entrez, Source	neurogenic differentiation 2	8718	-0.043	0.1642	No
75	PACSIN3	PACSIN3 Entrez, Source	protein kinase C and casein kinase substrate in neurons 3	8824	-0.044	0.1613	No
76	NEO1	NEO1 Entrez, Source	neogenin homolog 1 (chicken)	9160	-0.050	0.1417	No
77	TWIST2	TWIST2 Entrez, Source	twist homolog 2 (Drosophila)	9406	-0.054	0.1294	No
78	PLA2G1B	PLA2G1B Entrez, Source	phospholipase A2, group IB (pancreas)	9838	-0.063	0.1041	No
79	PRG1	PRG1 Entrez, Source	proteoglycan 1, secretory granule	10004	-0.066	0.0993	No
80	TOB1	TOB1 Entrez, Source	transducer of ERBB2, 1	10294	-0.072	0.0857	No
81	PUM2	PUM2 Entrez, Source	pumilio homolog 2 (Drosophila)	10315	-0.073	0.0925	No
82	BUB3	BUB3 Entrez, Source	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)	10355	-0.074	0.0980	No
83	SYN3	SYN3 Entrez, Source	synapsin III	11138	-0.094	0.0498	No
84	WNT5A	WNT5A Entrez, Source	wingless-type MMTV integration site family, member 5A	11232	-0.097	0.0538	No
85	FGF13	FGF13 Entrez, Source	fibroblast growth factor 13	11831	-0.118	0.0221	No
86	PRKCBP1	PRKCBP1 Entrez, Source	protein kinase C binding protein 1	11848	-0.119	0.0346	No
87	STOML2	STOML2 Entrez, Source	stomatin (EPB72)-like 2	12394	-0.148	0.0103	No
88	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12470	-0.153	0.0221	No
89	PAFAH1B3	PAFAH1B3 Entrez, Source	platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit 29kDa	12578	-0.161	0.0324	No
90	GTF2A1	GTF2A1 Entrez, Source	general transcription factor IIA, 1, 19/37kDa	13010	-0.220	0.0251	No