Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	V$SRF_C
Enrichment Score (ES)	0.5039047
Normalized Enrichment Score (NES)	1.8489047
Nominal p-value	0.0
FDR q-value	0.018633446
FWER p-Value	0.846

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	6	1.154	0.0833	Yes
2	FOS	FOS Entrez, Source	v-fos FBJ murine osteosarcoma viral oncogene homolog	9	0.936	0.1512	Yes
3	SLC25A4	SLC25A4 Entrez, Source	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4	14	0.830	0.2112	Yes
4	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	87	0.537	0.2448	Yes
5	RAB30	RAB30 Entrez, Source	RAB30, member RAS oncogene family	98	0.518	0.2817	Yes
6	TAGLN	TAGLN Entrez, Source	transgelin	250	0.344	0.2952	Yes
7	RNF39	RNF39 Entrez, Source	ring finger protein 39	266	0.331	0.3181	Yes
8	PPP2R3A	PPP2R3A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	331	0.289	0.3343	Yes
9	RGS3	RGS3 Entrez, Source	regulator of G-protein signalling 3	338	0.287	0.3547	Yes
10	POPDC2	POPDC2 Entrez, Source	popeye domain containing 2	368	0.273	0.3723	Yes
11	FOXP1	FOXP1 Entrez, Source	forkhead box P1	375	0.270	0.3915	Yes
12	DNAJB4	DNAJB4 Entrez, Source	DnaJ (Hsp40) homolog, subfamily B, member 4	410	0.256	0.4075	Yes
13	DUSP5	DUSP5 Entrez, Source	dual specificity phosphatase 5	472	0.237	0.4201	Yes
14	LTBP1	LTBP1 Entrez, Source	latent transforming growth factor beta binding protein 1	525	0.222	0.4322	Yes
15	CYR61	CYR61 Entrez, Source	cysteine-rich, angiogenic inducer, 61	600	0.206	0.4416	Yes
16	ACTG2	ACTG2 Entrez, Source	actin, gamma 2, smooth muscle, enteric	711	0.183	0.4467	Yes
17	EGR1	EGR1 Entrez, Source	early growth response 1	756	0.176	0.4561	Yes
18	SSH3	SSH3 Entrez, Source	slingshot homolog 3 (Drosophila)	792	0.170	0.4658	Yes
19	JUNB	JUNB Entrez, Source	jun B proto-oncogene	861	0.161	0.4724	Yes
20	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1043	0.142	0.4690	Yes
21	ITGB6	ITGB6 Entrez, Source	integrin, beta 6	1054	0.141	0.4785	Yes
22	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	1218	0.126	0.4754	Yes
23	MYO1E	MYO1E Entrez, Source	myosin IE	1228	0.126	0.4838	Yes
24	PLN	PLN Entrez, Source	phospholamban	1420	0.112	0.4775	Yes
25	ANXA6	ANXA6 Entrez, Source	annexin A6	1439	0.111	0.4842	Yes
26	IER2	IER2 Entrez, Source	immediate early response 2	1461	0.110	0.4907	Yes
27	DUSP6	DUSP6 Entrez, Source	dual specificity phosphatase 6	1504	0.108	0.4953	Yes
28	TGFB1I1	TGFB1I1 Entrez, Source	transforming growth factor beta 1 induced transcript 1	1509	0.108	0.5029	Yes
29	MYO1B	MYO1B Entrez, Source	myosin IB	1595	0.103	0.5039	Yes
30	DAPK3	DAPK3 Entrez, Source	death-associated protein kinase 3	2490	0.068	0.4413	No
31	DUSP2	DUSP2 Entrez, Source	dual specificity phosphatase 2	2724	0.062	0.4282	No
32	EGR3	EGR3 Entrez, Source	early growth response 3	2754	0.061	0.4305	No
33	LCP1	LCP1 Entrez, Source	lymphocyte cytosolic protein 1 (L-plastin)	2802	0.060	0.4313	No
34	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	2825	0.059	0.4340	No
35	POU3F4	POU3F4 Entrez, Source	POU domain, class 3, transcription factor 4	2929	0.057	0.4303	No
36	ZFHX1B	ZFHX1B Entrez, Source	zinc finger homeobox 1b	3081	0.052	0.4227	No
37	PLCB3	PLCB3 Entrez, Source	phospholipase C, beta 3 (phosphatidylinositol-specific)	3154	0.051	0.4209	No
38	ACTN1	ACTN1 Entrez, Source	actinin, alpha 1	3213	0.049	0.4201	No
39	MCAM	MCAM Entrez, Source	melanoma cell adhesion molecule	3354	0.046	0.4129	No
40	SLC2A4	SLC2A4 Entrez, Source	solute carrier family 2 (facilitated glucose transporter), member 4	3677	0.039	0.3914	No
41	ASPA	ASPA Entrez, Source	aspartoacylase (Canavan disease)	3681	0.039	0.3940	No
42	GPR20	GPR20 Entrez, Source	G protein-coupled receptor 20	3709	0.039	0.3947	No
43	FGFRL1	FGFRL1 Entrez, Source	fibroblast growth factor receptor-like 1	3851	0.036	0.3867	No
44	EGR4	EGR4 Entrez, Source	early growth response 4	4003	0.033	0.3777	No
45	CAP1	CAP1 Entrez, Source	CAP, adenylate cyclase-associated protein 1 (yeast)	4084	0.031	0.3739	No
46	AKAP12	AKAP12 Entrez, Source	A kinase (PRKA) anchor protein (gravin) 12	4283	0.028	0.3609	No
47	KCNK3	KCNK3 Entrez, Source	potassium channel, subfamily K, member 3	4699	0.020	0.3310	No
48	GFPT2	GFPT2 Entrez, Source	glutamine-fructose-6-phosphate transaminase 2	4965	0.016	0.3122	No
49	ACTB	ACTB Entrez, Source	actin, beta	5041	0.014	0.3075	No
50	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	5051	0.014	0.3079	No
51	USP52	USP52 Entrez, Source	ubiquitin specific peptidase 52	5230	0.011	0.2953	No
52	TCF2	TCF2 Entrez, Source	transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor	5337	0.010	0.2879	No
53	MAPK14	MAPK14 Entrez, Source	mitogen-activated protein kinase 14	5554	0.007	0.2721	No
54	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	5565	0.006	0.2718	No
55	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	5602	0.006	0.2695	No
56	TNNC1	TNNC1 Entrez, Source	troponin C type 1 (slow)	5793	0.003	0.2553	No
57	DSTN	DSTN Entrez, Source	destrin (actin depolymerizing factor)	5815	0.003	0.2539	No
58	CALD1	CALD1 Entrez, Source	caldesmon 1	5970	0.001	0.2423	No
59	TOP1	TOP1 Entrez, Source	topoisomerase (DNA) I	6078	-0.001	0.2343	No
60	ROCK2	ROCK2 Entrez, Source	Rho-associated, coiled-coil containing protein kinase 2	6100	-0.002	0.2329	No
61	IL17B	IL17B Entrez, Source	interleukin 17B	6244	-0.004	0.2223	No
62	PADI2	PADI2 Entrez, Source	peptidyl arginine deiminase, type II	6353	-0.006	0.2146	No
63	MBNL1	MBNL1 Entrez, Source	muscleblind-like (Drosophila)	6403	-0.006	0.2113	No
64	PDLIM7	PDLIM7 Entrez, Source	PDZ and LIM domain 7 (enigma)	6732	-0.011	0.1874	No
65	CRK	CRK Entrez, Source	v-crk sarcoma virus CT10 oncogene homolog (avian)	7199	-0.018	0.1535	No
66	CACNA1B	CACNA1B Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1B subunit	7282	-0.019	0.1487	No
67	JPH2	JPH2 Entrez, Source	junctophilin 2	7506	-0.023	0.1335	No
68	RBBP7	RBBP7 Entrez, Source	retinoblastoma binding protein 7	7634	-0.025	0.1257	No
69	PPP1R12A	PPP1R12A Entrez, Source	protein phosphatase 1, regulatory (inhibitor) subunit 12A	7696	-0.026	0.1230	No
70	ACVR1	ACVR1 Entrez, Source	activin A receptor, type I	7971	-0.030	0.1045	No
71	GRK6	GRK6 Entrez, Source	G protein-coupled receptor kinase 6	8007	-0.031	0.1041	No
72	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	8086	-0.032	0.1005	No
73	PHF12	PHF12 Entrez, Source	PHD finger protein 12	8193	-0.034	0.0950	No
74	SRD5A2	SRD5A2 Entrez, Source	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	8528	-0.039	0.0726	No
75	FOXE3	FOXE3 Entrez, Source	forkhead box E3	8571	-0.040	0.0723	No
76	GGN	GGN Entrez, Source	gametogenetin	8632	-0.041	0.0707	No
77	KCNMB1	KCNMB1 Entrez, Source	potassium large conductance calcium-activated channel, subfamily M, beta member 1	8825	-0.044	0.0594	No
78	FHL2	FHL2 Entrez, Source	four and a half LIM domains 2	9173	-0.050	0.0369	No
79	DLL1	DLL1 Entrez, Source	delta-like 1 (Drosophila)	9257	-0.052	0.0344	No
80	TITF1	TITF1 Entrez, Source	thyroid transcription factor 1	9298	-0.052	0.0351	No
81	DIXDC1	DIXDC1 Entrez, Source	DIX domain containing 1	9318	-0.053	0.0376	No
82	MRGPRF	MRGPRF Entrez, Source	MAS-related GPR, member F	9403	-0.054	0.0351	No
83	MAP1A	MAP1A Entrez, Source	microtubule-associated protein 1A	9542	-0.057	0.0288	No
84	RASD2	RASD2 Entrez, Source	RASD family, member 2	9709	-0.060	0.0206	No
85	YWHAZ	YWHAZ Entrez, Source	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	9753	-0.061	0.0218	No
86	ITGA7	ITGA7 Entrez, Source	integrin, alpha 7	9876	-0.064	0.0172	No
87	CNN1	CNN1 Entrez, Source	calponin 1, basic, smooth muscle	10018	-0.067	0.0114	No
88	PRKAB2	PRKAB2 Entrez, Source	protein kinase, AMP-activated, beta 2 non-catalytic subunit	10029	-0.067	0.0155	No
89	MYH11	MYH11 Entrez, Source	myosin, heavy chain 11, smooth muscle	10036	-0.067	0.0199	No
90	AOC3	AOC3 Entrez, Source	amine oxidase, copper containing 3 (vascular adhesion protein 1)	10438	-0.076	-0.0049	No
91	ACTR3	ACTR3 Entrez, Source	ARP3 actin-related protein 3 homolog (yeast)	10514	-0.078	-0.0048	No
92	PNKP	PNKP Entrez, Source	polynucleotide kinase 3'-phosphatase	10519	-0.078	0.0005	No
93	ASB2	ASB2 Entrez, Source	ankyrin repeat and SOCS box-containing 2	10614	-0.080	-0.0007	No
94	PFN1	PFN1 Entrez, Source	profilin 1	10821	-0.086	-0.0101	No
95	CFL1	CFL1 Entrez, Source	cofilin 1 (non-muscle)	10892	-0.088	-0.0090	No
96	CKM	CKM Entrez, Source	creatine kinase, muscle	11187	-0.095	-0.0242	No
97	TPM3	TPM3 Entrez, Source	tropomyosin 3	11208	-0.096	-0.0188	No
98	SIPA1	SIPA1 Entrez, Source	signal-induced proliferation-associated gene 1	11380	-0.101	-0.0243	No
99	MUS81	MUS81 Entrez, Source	MUS81 endonuclease homolog (S. cerevisiae)	11503	-0.106	-0.0259	No
100	FOSL1	FOSL1 Entrez, Source	FOS-like antigen 1	11938	-0.123	-0.0497	No
101	MATR3	MATR3 Entrez, Source	matrin 3	11949	-0.124	-0.0414	No
102	HOXA5	HOXA5 Entrez, Source	homeobox A5	12360	-0.146	-0.0618	No
103	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12470	-0.153	-0.0589	No
104	SLC7A1	SLC7A1 Entrez, Source	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	12592	-0.163	-0.0563	No
105	SYNCRIP	SYNCRIP Entrez, Source	synaptotagmin binding, cytoplasmic RNA interacting protein	12730	-0.176	-0.0538	No
106	STAT5B	STAT5B Entrez, Source	signal transducer and activator of transcription 5B	13179	-0.287	-0.0668	No
107	GADD45G	GADD45G Entrez, Source	growth arrest and DNA-damage-inducible, gamma	13302	-0.454	-0.0431	No
108	CA3	CA3 Entrez, Source	carbonic anhydrase III, muscle specific	13327	-0.634	0.0011	No