Details for gene set V$SRF_Q5

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	V$SRF_Q5_01
Enrichment Score (ES)	0.48340538
Normalized Enrichment Score (NES)	1.8015367
Nominal p-value	0.0032733225
FDR q-value	0.02553576
FWER p-Value	0.969

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	FOS	FOS Entrez, Source	v-fos FBJ murine osteosarcoma viral oncogene homolog	9	0.936	0.0782	Yes
2	SLC25A4	SLC25A4 Entrez, Source	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4	14	0.830	0.1479	Yes
3	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	87	0.537	0.1877	Yes
4	SGK	SGK Entrez, Source	serum/glucocorticoid regulated kinase	200	0.388	0.2119	Yes
5	TAGLN	TAGLN Entrez, Source	transgelin	250	0.344	0.2371	Yes
6	CITED2	CITED2 Entrez, Source	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	297	0.311	0.2599	Yes
7	ATF3	ATF3 Entrez, Source	activating transcription factor 3	310	0.299	0.2842	Yes
8	TIMP3	TIMP3 Entrez, Source	TIMP metallopeptidase inhibitor 3 (Sorsby fundus dystrophy, pseudoinflammatory)	329	0.291	0.3073	Yes
9	PPP2R3A	PPP2R3A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	331	0.289	0.3316	Yes
10	FOXP1	FOXP1 Entrez, Source	forkhead box P1	375	0.270	0.3511	Yes
11	DUSP5	DUSP5 Entrez, Source	dual specificity phosphatase 5	472	0.237	0.3637	Yes
12	MYADM	MYADM Entrez, Source	myeloid-associated differentiation marker	591	0.208	0.3723	Yes
13	COL1A1	COL1A1 Entrez, Source	collagen, type I, alpha 1	673	0.190	0.3823	Yes
14	ACTG2	ACTG2 Entrez, Source	actin, gamma 2, smooth muscle, enteric	711	0.183	0.3949	Yes
15	EGR1	EGR1 Entrez, Source	early growth response 1	756	0.176	0.4064	Yes
16	TRIM3	TRIM3 Entrez, Source	tripartite motif-containing 3	854	0.162	0.4127	Yes
17	SLC16A6	SLC16A6 Entrez, Source	solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	855	0.162	0.4263	Yes
18	JUNB	JUNB Entrez, Source	jun B proto-oncogene	861	0.161	0.4395	Yes
19	ITGB6	ITGB6 Entrez, Source	integrin, beta 6	1054	0.141	0.4369	Yes
20	PPAP2B	PPAP2B Entrez, Source	phosphatidic acid phosphatase type 2B	1114	0.135	0.4438	Yes
21	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	1218	0.126	0.4466	Yes
22	MYO1E	MYO1E Entrez, Source	myosin IE	1228	0.126	0.4565	Yes
23	MAPKAPK2	MAPKAPK2 Entrez, Source	mitogen-activated protein kinase-activated protein kinase 2	1230	0.125	0.4670	Yes
24	PLN	PLN Entrez, Source	phospholamban	1420	0.112	0.4622	Yes
25	ANXA6	ANXA6 Entrez, Source	annexin A6	1439	0.111	0.4702	Yes
26	IER2	IER2 Entrez, Source	immediate early response 2	1461	0.110	0.4779	Yes
27	TGFB1I1	TGFB1I1 Entrez, Source	transforming growth factor beta 1 induced transcript 1	1509	0.108	0.4834	Yes
28	SDPR	SDPR Entrez, Source	serum deprivation response (phosphatidylserine binding protein)	2231	0.076	0.4354	No
29	TNMD	TNMD Entrez, Source	tenomodulin	2474	0.069	0.4228	No
30	CDKN1B	CDKN1B Entrez, Source	cyclin-dependent kinase inhibitor 1B (p27, Kip1)	2499	0.068	0.4268	No
31	CRH	CRH Entrez, Source	corticotropin releasing hormone	2685	0.063	0.4181	No
32	RERE	RERE Entrez, Source	arginine-glutamic acid dipeptide (RE) repeats	2695	0.063	0.4227	No
33	EGR3	EGR3 Entrez, Source	early growth response 3	2754	0.061	0.4235	No
34	LCP1	LCP1 Entrez, Source	lymphocyte cytosolic protein 1 (L-plastin)	2802	0.060	0.4250	No
35	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	2825	0.059	0.4283	No
36	TRDN	TRDN Entrez, Source	triadin	2851	0.059	0.4314	No
37	PLCB3	PLCB3 Entrez, Source	phospholipase C, beta 3 (phosphatidylinositol-specific)	3154	0.051	0.4128	No
38	ACTN1	ACTN1 Entrez, Source	actinin, alpha 1	3213	0.049	0.4126	No
39	SLC2A4	SLC2A4 Entrez, Source	solute carrier family 2 (facilitated glucose transporter), member 4	3677	0.039	0.3809	No
40	ASPA	ASPA Entrez, Source	aspartoacylase (Canavan disease)	3681	0.039	0.3840	No
41	GPR20	GPR20 Entrez, Source	G protein-coupled receptor 20	3709	0.039	0.3852	No
42	FGFRL1	FGFRL1 Entrez, Source	fibroblast growth factor receptor-like 1	3851	0.036	0.3775	No
43	ATF4	ATF4 Entrez, Source	activating transcription factor 4 (tax-responsive enhancer element B67)	3861	0.035	0.3798	No
44	FGF7	FGF7 Entrez, Source	fibroblast growth factor 7 (keratinocyte growth factor)	4156	0.030	0.3601	No
45	FLNC	FLNC Entrez, Source	filamin C, gamma (actin binding protein 280)	4230	0.029	0.3570	No
46	SLC4A3	SLC4A3 Entrez, Source	solute carrier family 4, anion exchanger, member 3	4573	0.022	0.3330	No
47	KCNK3	KCNK3 Entrez, Source	potassium channel, subfamily K, member 3	4699	0.020	0.3253	No
48	NFATC4	NFATC4 Entrez, Source	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	4838	0.018	0.3164	No
49	RARB	RARB Entrez, Source	retinoic acid receptor, beta	4926	0.016	0.3112	No
50	DGKG	DGKG Entrez, Source	diacylglycerol kinase, gamma 90kDa	5006	0.015	0.3065	No
51	ACTB	ACTB Entrez, Source	actin, beta	5041	0.014	0.3051	No
52	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	5051	0.014	0.3056	No
53	COL23A1	COL23A1 Entrez, Source	collagen, type XXIII, alpha 1	5372	0.009	0.2822	No
54	RIMS1	RIMS1 Entrez, Source	regulating synaptic membrane exocytosis 1	5444	0.008	0.2775	No
55	MAPK14	MAPK14 Entrez, Source	mitogen-activated protein kinase 14	5554	0.007	0.2698	No
56	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	5565	0.006	0.2696	No
57	CXCL5	CXCL5 Entrez, Source	chemokine (C-X-C motif) ligand 5	5599	0.006	0.2676	No
58	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	5602	0.006	0.2679	No
59	PICALM	PICALM Entrez, Source	phosphatidylinositol binding clathrin assembly protein	5636	0.005	0.2659	No
60	NRAS	NRAS Entrez, Source	neuroblastoma RAS viral (v-ras) oncogene homolog	5695	0.004	0.2619	No
61	NPPA	NPPA Entrez, Source	natriuretic peptide precursor A	5715	0.004	0.2608	No
62	DSTN	DSTN Entrez, Source	destrin (actin depolymerizing factor)	5815	0.003	0.2535	No
63	KCNA1	KCNA1 Entrez, Source	potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)	5912	0.001	0.2464	No
64	CALD1	CALD1 Entrez, Source	caldesmon 1	5970	0.001	0.2421	No
65	IL17B	IL17B Entrez, Source	interleukin 17B	6244	-0.004	0.2218	No
66	PADI2	PADI2 Entrez, Source	peptidyl arginine deiminase, type II	6353	-0.006	0.2141	No
67	MBNL1	MBNL1 Entrez, Source	muscleblind-like (Drosophila)	6403	-0.006	0.2109	No
68	MAP2K6	MAP2K6 Entrez, Source	mitogen-activated protein kinase kinase 6	6447	-0.007	0.2082	No
69	PDLIM7	PDLIM7 Entrez, Source	PDZ and LIM domain 7 (enigma)	6732	-0.011	0.1877	No
70	OTX1	OTX1 Entrez, Source	orthodenticle homolog 1 (Drosophila)	6913	-0.014	0.1753	No
71	CACNA1B	CACNA1B Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1B subunit	7282	-0.019	0.1491	No
72	PPARG	PPARG Entrez, Source	peroxisome proliferative activated receptor, gamma	7396	-0.021	0.1423	No
73	TAF5L	TAF5L Entrez, Source	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa	7536	-0.023	0.1338	No
74	H2AFX	H2AFX Entrez, Source	H2A histone family, member X	7594	-0.024	0.1315	No
75	RBBP7	RBBP7 Entrez, Source	retinoblastoma binding protein 7	7634	-0.025	0.1306	No
76	MID1	MID1 Entrez, Source	midline 1 (Opitz/BBB syndrome)	7656	-0.025	0.1312	No
77	PPP1R12A	PPP1R12A Entrez, Source	protein phosphatase 1, regulatory (inhibitor) subunit 12A	7696	-0.026	0.1304	No
78	GRK6	GRK6 Entrez, Source	G protein-coupled receptor kinase 6	8007	-0.031	0.1096	No
79	CSRP1	CSRP1 Entrez, Source	cysteine and glycine-rich protein 1	8162	-0.033	0.1007	No
80	PHF12	PHF12 Entrez, Source	PHD finger protein 12	8193	-0.034	0.1013	No
81	SRD5A2	SRD5A2 Entrez, Source	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	8528	-0.039	0.0794	No
82	FOXE3	FOXE3 Entrez, Source	forkhead box E3	8571	-0.040	0.0796	No
83	GGN	GGN Entrez, Source	gametogenetin	8632	-0.041	0.0785	No
84	KCNH2	KCNH2 Entrez, Source	potassium voltage-gated channel, subfamily H (eag-related), member 2	9256	-0.052	0.0358	No
85	DLL1	DLL1 Entrez, Source	delta-like 1 (Drosophila)	9257	-0.052	0.0401	No
86	DIXDC1	DIXDC1 Entrez, Source	DIX domain containing 1	9318	-0.053	0.0401	No
87	MRGPRF	MRGPRF Entrez, Source	MAS-related GPR, member F	9403	-0.054	0.0383	No
88	MAP1A	MAP1A Entrez, Source	microtubule-associated protein 1A	9542	-0.057	0.0326	No
89	CDC25B	CDC25B Entrez, Source	cell division cycle 25B	9872	-0.064	0.0131	No
90	CNN1	CNN1 Entrez, Source	calponin 1, basic, smooth muscle	10018	-0.067	0.0078	No
91	PRKAB2	PRKAB2 Entrez, Source	protein kinase, AMP-activated, beta 2 non-catalytic subunit	10029	-0.067	0.0127	No
92	MYH11	MYH11 Entrez, Source	myosin, heavy chain 11, smooth muscle	10036	-0.067	0.0179	No
93	ARF6	ARF6 Entrez, Source	ADP-ribosylation factor 6	10133	-0.069	0.0164	No
94	ACTR3	ACTR3 Entrez, Source	ARP3 actin-related protein 3 homolog (yeast)	10514	-0.078	-0.0057	No
95	ASB2	ASB2 Entrez, Source	ankyrin repeat and SOCS box-containing 2	10614	-0.080	-0.0064	No
96	PFN1	PFN1 Entrez, Source	profilin 1	10821	-0.086	-0.0148	No
97	CFL1	CFL1 Entrez, Source	cofilin 1 (non-muscle)	10892	-0.088	-0.0126	No
98	FGF17	FGF17 Entrez, Source	fibroblast growth factor 17	11001	-0.090	-0.0132	No
99	FGF8	FGF8 Entrez, Source	fibroblast growth factor 8 (androgen-induced)	11017	-0.091	-0.0067	No
100	NRXN3	NRXN3 Entrez, Source	neurexin 3	11130	-0.094	-0.0072	No
101	CKM	CKM Entrez, Source	creatine kinase, muscle	11187	-0.095	-0.0034	No
102	TPM3	TPM3 Entrez, Source	tropomyosin 3	11208	-0.096	0.0032	No
103	MUS81	MUS81 Entrez, Source	MUS81 endonuclease homolog (S. cerevisiae)	11503	-0.106	-0.0101	No
104	ABCA1	ABCA1 Entrez, Source	ATP-binding cassette, sub-family A (ABC1), member 1	11627	-0.110	-0.0101	No
105	NPR3	NPR3 Entrez, Source	natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	12092	-0.131	-0.0341	No
106	CSDA	CSDA Entrez, Source	cold shock domain protein A	12392	-0.148	-0.0443	No
107	STAT5B	STAT5B Entrez, Source	signal transducer and activator of transcription 5B	13179	-0.287	-0.0795	No
108	GADD45G	GADD45G Entrez, Source	growth arrest and DNA-damage-inducible, gamma	13302	-0.454	-0.0505	No
109	CA3	CA3 Entrez, Source	carbonic anhydrase III, muscle specific	13327	-0.634	0.0011	No