Details for gene set V$SRF

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	V$SRF_Q6
Enrichment Score (ES)	0.47215387
Normalized Enrichment Score (NES)	1.7700214
Nominal p-value	0.0015432099
FDR q-value	0.030816386
FWER p-Value	0.987

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	6	1.154	0.0818	Yes
2	FOS	FOS Entrez, Source	v-fos FBJ murine osteosarcoma viral oncogene homolog	9	0.936	0.1485	Yes
3	SLC25A4	SLC25A4 Entrez, Source	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4	14	0.830	0.2075	Yes
4	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	87	0.537	0.2403	Yes
5	FST	FST Entrez, Source	follistatin	169	0.423	0.2644	Yes
6	PRELP	PRELP Entrez, Source	proline/arginine-rich end leucine-rich repeat protein	204	0.383	0.2892	Yes
7	TAGLN	TAGLN Entrez, Source	transgelin	250	0.344	0.3103	Yes
8	CITED2	CITED2 Entrez, Source	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	297	0.311	0.3290	Yes
9	PPP2R3A	PPP2R3A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	331	0.289	0.3471	Yes
10	FOXP1	FOXP1 Entrez, Source	forkhead box P1	375	0.270	0.3631	Yes
11	ACAA2	ACAA2 Entrez, Source	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	470	0.238	0.3730	Yes
12	DUSP5	DUSP5 Entrez, Source	dual specificity phosphatase 5	472	0.237	0.3898	Yes
13	MYADM	MYADM Entrez, Source	myeloid-associated differentiation marker	591	0.208	0.3957	Yes
14	COL1A1	COL1A1 Entrez, Source	collagen, type I, alpha 1	673	0.190	0.4031	Yes
15	ACTG2	ACTG2 Entrez, Source	actin, gamma 2, smooth muscle, enteric	711	0.183	0.4134	Yes
16	EGR1	EGR1 Entrez, Source	early growth response 1	756	0.176	0.4226	Yes
17	BDNF	BDNF Entrez, Source	brain-derived neurotrophic factor	795	0.170	0.4319	Yes
18	CX3CL1	CX3CL1 Entrez, Source	chemokine (C-X3-C motif) ligand 1	837	0.164	0.4405	Yes
19	JUNB	JUNB Entrez, Source	jun B proto-oncogene	861	0.161	0.4503	Yes
20	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1043	0.142	0.4467	Yes
21	PPAP2B	PPAP2B Entrez, Source	phosphatidic acid phosphatase type 2B	1114	0.135	0.4511	Yes
22	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	1218	0.126	0.4523	Yes
23	MYO1E	MYO1E Entrez, Source	myosin IE	1228	0.126	0.4605	Yes
24	MAPKAPK2	MAPKAPK2 Entrez, Source	mitogen-activated protein kinase-activated protein kinase 2	1230	0.125	0.4694	Yes
25	PLN	PLN Entrez, Source	phospholamban	1420	0.112	0.4631	Yes
26	ANXA6	ANXA6 Entrez, Source	annexin A6	1439	0.111	0.4697	Yes
27	TGFB1I1	TGFB1I1 Entrez, Source	transforming growth factor beta 1 induced transcript 1	1509	0.108	0.4722	Yes
28	TES	TES Entrez, Source	testis derived transcript (3 LIM domains)	1616	0.102	0.4714	No
29	SDPR	SDPR Entrez, Source	serum deprivation response (phosphatidylserine binding protein)	2231	0.076	0.4304	No
30	NNAT	NNAT Entrez, Source	neuronatin	2370	0.072	0.4251	No
31	TNMD	TNMD Entrez, Source	tenomodulin	2474	0.069	0.4222	No
32	CDKN1B	CDKN1B Entrez, Source	cyclin-dependent kinase inhibitor 1B (p27, Kip1)	2499	0.068	0.4252	No
33	RERE	RERE Entrez, Source	arginine-glutamic acid dipeptide (RE) repeats	2695	0.063	0.4149	No
34	DUSP2	DUSP2 Entrez, Source	dual specificity phosphatase 2	2724	0.062	0.4172	No
35	EGR3	EGR3 Entrez, Source	early growth response 3	2754	0.061	0.4194	No
36	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	2825	0.059	0.4183	No
37	TRDN	TRDN Entrez, Source	triadin	2851	0.059	0.4207	No
38	POU3F4	POU3F4 Entrez, Source	POU domain, class 3, transcription factor 4	2929	0.057	0.4189	No
39	PLCB3	PLCB3 Entrez, Source	phospholipase C, beta 3 (phosphatidylinositol-specific)	3154	0.051	0.4055	No
40	ACTN1	ACTN1 Entrez, Source	actinin, alpha 1	3213	0.049	0.4047	No
41	PDLIM3	PDLIM3 Entrez, Source	PDZ and LIM domain 3	3560	0.042	0.3814	No
42	GPR20	GPR20 Entrez, Source	G protein-coupled receptor 20	3709	0.039	0.3730	No
43	FGFRL1	FGFRL1 Entrez, Source	fibroblast growth factor receptor-like 1	3851	0.036	0.3649	No
44	ATF4	ATF4 Entrez, Source	activating transcription factor 4 (tax-responsive enhancer element B67)	3861	0.035	0.3667	No
45	AQP2	AQP2 Entrez, Source	aquaporin 2 (collecting duct)	3930	0.034	0.3640	No
46	CTDSP1	CTDSP1 Entrez, Source	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	4285	0.028	0.3392	No
47	CSNK1E	CSNK1E Entrez, Source	casein kinase 1, epsilon	4346	0.026	0.3365	No
48	SLC4A3	SLC4A3 Entrez, Source	solute carrier family 4, anion exchanger, member 3	4573	0.022	0.3210	No
49	KCNK3	KCNK3 Entrez, Source	potassium channel, subfamily K, member 3	4699	0.020	0.3130	No
50	NFATC4	NFATC4 Entrez, Source	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	4838	0.018	0.3038	No
51	RARB	RARB Entrez, Source	retinoic acid receptor, beta	4926	0.016	0.2984	No
52	DGKG	DGKG Entrez, Source	diacylglycerol kinase, gamma 90kDa	5006	0.015	0.2935	No
53	ACTB	ACTB Entrez, Source	actin, beta	5041	0.014	0.2919	No
54	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	5051	0.014	0.2923	No
55	NKX6-1	NKX6-1 Entrez, Source	NK6 transcription factor related, locus 1 (Drosophila)	5386	0.009	0.2676	No
56	RIMS1	RIMS1 Entrez, Source	regulating synaptic membrane exocytosis 1	5444	0.008	0.2639	No
57	LDHA	LDHA Entrez, Source	lactate dehydrogenase A	5536	0.007	0.2575	No
58	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	5565	0.006	0.2558	No
59	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	5602	0.006	0.2535	No
60	PICALM	PICALM Entrez, Source	phosphatidylinositol binding clathrin assembly protein	5636	0.005	0.2514	No
61	GNG8	GNG8 Entrez, Source	guanine nucleotide binding protein (G protein), gamma 8	5642	0.005	0.2514	No
62	NPPA	NPPA Entrez, Source	natriuretic peptide precursor A	5715	0.004	0.2462	No
63	TNNC1	TNNC1 Entrez, Source	troponin C type 1 (slow)	5793	0.003	0.2406	No
64	KCNA1	KCNA1 Entrez, Source	potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)	5912	0.001	0.2317	No
65	CALD1	CALD1 Entrez, Source	caldesmon 1	5970	0.001	0.2275	No
66	ROCK2	ROCK2 Entrez, Source	Rho-associated, coiled-coil containing protein kinase 2	6100	-0.002	0.2178	No
67	IL17B	IL17B Entrez, Source	interleukin 17B	6244	-0.004	0.2073	No
68	PADI2	PADI2 Entrez, Source	peptidyl arginine deiminase, type II	6353	-0.006	0.1995	No
69	SCN3B	SCN3B Entrez, Source	sodium channel, voltage-gated, type III, beta	6379	-0.006	0.1980	No
70	MBNL1	MBNL1 Entrez, Source	muscleblind-like (Drosophila)	6403	-0.006	0.1967	No
71	MAP2K6	MAP2K6 Entrez, Source	mitogen-activated protein kinase kinase 6	6447	-0.007	0.1940	No
72	PDLIM7	PDLIM7 Entrez, Source	PDZ and LIM domain 7 (enigma)	6732	-0.011	0.1733	No
73	CACNA1B	CACNA1B Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1B subunit	7282	-0.019	0.1331	No
74	DHH	DHH Entrez, Source	desert hedgehog homolog (Drosophila)	7363	-0.020	0.1286	No
75	PPARG	PPARG Entrez, Source	peroxisome proliferative activated receptor, gamma	7396	-0.021	0.1276	No
76	JPH2	JPH2 Entrez, Source	junctophilin 2	7506	-0.023	0.1210	No
77	H2AFX	H2AFX Entrez, Source	H2A histone family, member X	7594	-0.024	0.1161	No
78	RAB27A	RAB27A Entrez, Source	RAB27A, member RAS oncogene family	7609	-0.024	0.1168	No
79	RBBP7	RBBP7 Entrez, Source	retinoblastoma binding protein 7	7634	-0.025	0.1167	No
80	PPP1R12A	PPP1R12A Entrez, Source	protein phosphatase 1, regulatory (inhibitor) subunit 12A	7696	-0.026	0.1140	No
81	IGF1	IGF1 Entrez, Source	insulin-like growth factor 1 (somatomedin C)	7950	-0.030	0.0970	No
82	GRK6	GRK6 Entrez, Source	G protein-coupled receptor kinase 6	8007	-0.031	0.0949	No
83	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	8086	-0.032	0.0913	No
84	MSX1	MSX1 Entrez, Source	msh homeobox homolog 1 (Drosophila)	8144	-0.033	0.0894	No
85	PHF12	PHF12 Entrez, Source	PHD finger protein 12	8193	-0.034	0.0882	No
86	EPHB1	EPHB1 Entrez, Source	EPH receptor B1	8320	-0.036	0.0812	No
87	SRD5A2	SRD5A2 Entrez, Source	steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	8528	-0.039	0.0683	No
88	FOXE3	FOXE3 Entrez, Source	forkhead box E3	8571	-0.040	0.0680	No
89	RAP1A	RAP1A Entrez, Source	RAP1A, member of RAS oncogene family	8724	-0.043	0.0596	No
90	CABP1	CABP1 Entrez, Source	calcium binding protein 1 (calbrain)	8815	-0.044	0.0559	No
91	KCNMB1	KCNMB1 Entrez, Source	potassium large conductance calcium-activated channel, subfamily M, beta member 1	8825	-0.044	0.0584	No
92	TCF8	TCF8 Entrez, Source	transcription factor 8 (represses interleukin 2 expression)	8965	-0.047	0.0512	No
93	UBE2D3	UBE2D3 Entrez, Source	ubiquitin-conjugating enzyme E2D 3 (UBC4/5 homolog, yeast)	8991	-0.047	0.0527	No
94	TITF1	TITF1 Entrez, Source	thyroid transcription factor 1	9298	-0.052	0.0333	No
95	DIXDC1	DIXDC1 Entrez, Source	DIX domain containing 1	9318	-0.053	0.0356	No
96	MRGPRF	MRGPRF Entrez, Source	MAS-related GPR, member F	9403	-0.054	0.0331	No
97	MAP1A	MAP1A Entrez, Source	microtubule-associated protein 1A	9542	-0.057	0.0267	No
98	RASD2	RASD2 Entrez, Source	RASD family, member 2	9709	-0.060	0.0184	No
99	ATP1A2	ATP1A2 Entrez, Source	ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide	9825	-0.063	0.0142	No
100	ITGA7	ITGA7 Entrez, Source	integrin, alpha 7	9876	-0.064	0.0149	No
101	CNN1	CNN1 Entrez, Source	calponin 1, basic, smooth muscle	10018	-0.067	0.0090	No
102	PRKAB2	PRKAB2 Entrez, Source	protein kinase, AMP-activated, beta 2 non-catalytic subunit	10029	-0.067	0.0131	No
103	MYH11	MYH11 Entrez, Source	myosin, heavy chain 11, smooth muscle	10036	-0.067	0.0174	No
104	ACTR3	ACTR3 Entrez, Source	ARP3 actin-related protein 3 homolog (yeast)	10514	-0.078	-0.0131	No
105	HOXA1	HOXA1 Entrez, Source	homeobox A1	10536	-0.079	-0.0091	No
106	PFN1	PFN1 Entrez, Source	profilin 1	10821	-0.086	-0.0245	No
107	CFL1	CFL1 Entrez, Source	cofilin 1 (non-muscle)	10892	-0.088	-0.0235	No
108	FGF8	FGF8 Entrez, Source	fibroblast growth factor 8 (androgen-induced)	11017	-0.091	-0.0264	No
109	CKM	CKM Entrez, Source	creatine kinase, muscle	11187	-0.095	-0.0323	No
110	TPM3	TPM3 Entrez, Source	tropomyosin 3	11208	-0.096	-0.0270	No
111	WNT5A	WNT5A Entrez, Source	wingless-type MMTV integration site family, member 5A	11232	-0.097	-0.0219	No
112	SIPA1	SIPA1 Entrez, Source	signal-induced proliferation-associated gene 1	11380	-0.101	-0.0258	No
113	MUS81	MUS81 Entrez, Source	MUS81 endonuclease homolog (S. cerevisiae)	11503	-0.106	-0.0274	No
114	LSP1	LSP1 Entrez, Source	lymphocyte-specific protein 1	11557	-0.108	-0.0237	No
115	FOSL1	FOSL1 Entrez, Source	FOS-like antigen 1	11938	-0.123	-0.0437	No
116	MATR3	MATR3 Entrez, Source	matrin 3	11949	-0.124	-0.0356	No
117	NPR3	NPR3 Entrez, Source	natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	12092	-0.131	-0.0370	No
118	CNTF	CNTF Entrez, Source	ciliary neurotrophic factor	12098	-0.132	-0.0280	No
119	HOXA5	HOXA5 Entrez, Source	homeobox A5	12360	-0.146	-0.0373	No
120	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12470	-0.153	-0.0346	No
121	SLC7A1	SLC7A1 Entrez, Source	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	12592	-0.163	-0.0322	No
122	SYNCRIP	SYNCRIP Entrez, Source	synaptotagmin binding, cytoplasmic RNA interacting protein	12730	-0.176	-0.0300	No
123	STAT5B	STAT5B Entrez, Source	signal transducer and activator of transcription 5B	13179	-0.287	-0.0434	No
124	KIF1B	KIF1B Entrez, Source	kinesin family member 1B	13231	-0.325	-0.0240	No
125	GADD45G	GADD45G Entrez, Source	growth arrest and DNA-damage-inducible, gamma	13302	-0.454	0.0030	No