Details for gene set V$TEF1

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	V$TEF1_Q6
Enrichment Score (ES)	0.5289334
Normalized Enrichment Score (NES)	1.8712046
Nominal p-value	0.0
FDR q-value	0.016410207
FWER p-Value	0.76

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	CCND2	CCND2 Entrez, Source	cyclin D2	10	0.885	0.0751	Yes
2	LAMC2	LAMC2 Entrez, Source	laminin, gamma 2	19	0.791	0.1424	Yes
3	CPT1A	CPT1A Entrez, Source	carnitine palmitoyltransferase 1A (liver)	47	0.660	0.1969	Yes
4	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	87	0.537	0.2401	Yes
5	ANKRD1	ANKRD1 Entrez, Source	ankyrin repeat domain 1 (cardiac muscle)	93	0.529	0.2851	Yes
6	RAB30	RAB30 Entrez, Source	RAB30, member RAS oncogene family	98	0.518	0.3292	Yes
7	CRYAB	CRYAB Entrez, Source	crystallin, alpha B	106	0.494	0.3710	Yes
8	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	252	0.342	0.3893	Yes
9	PEA15	PEA15 Entrez, Source	phosphoprotein enriched in astrocytes 15	279	0.322	0.4150	Yes
10	ANXA8	ANXA8 Entrez, Source	annexin A8	289	0.316	0.4414	Yes
11	BBOX1	BBOX1 Entrez, Source	butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1	309	0.300	0.4657	Yes
12	USP2	USP2 Entrez, Source	ubiquitin specific peptidase 2	419	0.254	0.4792	Yes
13	CYR61	CYR61 Entrez, Source	cysteine-rich, angiogenic inducer, 61	600	0.206	0.4833	Yes
14	PBXIP1	PBXIP1 Entrez, Source	pre-B-cell leukemia transcription factor interacting protein 1	630	0.201	0.4983	Yes
15	BDNF	BDNF Entrez, Source	brain-derived neurotrophic factor	795	0.170	0.5005	Yes
16	SLC6A13	SLC6A13 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, GABA), member 13	803	0.169	0.5145	Yes
17	JAM3	JAM3 Entrez, Source	junctional adhesion molecule 3	898	0.157	0.5209	Yes
18	NES	NES Entrez, Source	nestin	1147	0.132	0.5135	Yes
19	ACTA1	ACTA1 Entrez, Source	actin, alpha 1, skeletal muscle	1218	0.126	0.5190	Yes
20	MAPKAPK2	MAPKAPK2 Entrez, Source	mitogen-activated protein kinase-activated protein kinase 2	1230	0.125	0.5289	Yes
21	PRKAA2	PRKAA2 Entrez, Source	protein kinase, AMP-activated, alpha 2 catalytic subunit	1575	0.104	0.5119	No
22	AVPI1	AVPI1 Entrez, Source	arginine vasopressin-induced 1	1576	0.104	0.5208	No
23	CACNA1E	CACNA1E Entrez, Source	calcium channel, voltage-dependent, alpha 1E subunit	1771	0.094	0.5142	No
24	NPPB	NPPB Entrez, Source	natriuretic peptide precursor B	1828	0.092	0.5179	No
25	DEDD	DEDD Entrez, Source	death effector domain containing	2043	0.083	0.5089	No
26	ADIPOR1	ADIPOR1 Entrez, Source	adiponectin receptor 1	2181	0.078	0.5052	No
27	SLC6A9	SLC6A9 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	2183	0.078	0.5118	No
28	ATP1B1	ATP1B1 Entrez, Source	ATPase, Na+/K+ transporting, beta 1 polypeptide	2395	0.071	0.5019	No
29	ADD3	ADD3 Entrez, Source	adducin 3 (gamma)	2434	0.070	0.5051	No
30	SCN2B	SCN2B Entrez, Source	sodium channel, voltage-gated, type II, beta	2628	0.064	0.4960	No
31	MCAM	MCAM Entrez, Source	melanoma cell adhesion molecule	3354	0.046	0.4452	No
32	DAB1	DAB1 Entrez, Source	disabled homolog 1 (Drosophila)	3399	0.045	0.4457	No
33	ANK3	ANK3 Entrez, Source	ankyrin 3, node of Ranvier (ankyrin G)	3412	0.045	0.4487	No
34	FOLR1	FOLR1 Entrez, Source	folate receptor 1 (adult)	3703	0.039	0.4301	No
35	FXYD6	FXYD6 Entrez, Source	FXYD domain containing ion transport regulator 6	3802	0.036	0.4258	No
36	PTPRF	PTPRF Entrez, Source	protein tyrosine phosphatase, receptor type, F	4202	0.029	0.3982	No
37	SLC39A13	SLC39A13 Entrez, Source	solute carrier family 39 (zinc transporter), member 13	4291	0.028	0.3939	No
38	MPZ	MPZ Entrez, Source	myelin protein zero (Charcot-Marie-Tooth neuropathy 1B)	4516	0.023	0.3790	No
39	CNNM2	CNNM2 Entrez, Source	cyclin M2	4865	0.017	0.3542	No
40	PIAS3	PIAS3 Entrez, Source	protein inhibitor of activated STAT, 3	4943	0.016	0.3498	No
41	GATA3	GATA3 Entrez, Source	GATA binding protein 3	5124	0.013	0.3373	No
42	CHKA	CHKA Entrez, Source	choline kinase alpha	5155	0.012	0.3361	No
43	SHC1	SHC1 Entrez, Source	SHC (Src homology 2 domain containing) transforming protein 1	5156	0.012	0.3371	No
44	EHD1	EHD1 Entrez, Source	EH-domain containing 1	5701	0.004	0.2965	No
45	RNF2	RNF2 Entrez, Source	ring finger protein 2	5936	0.001	0.2789	No
46	RTN3	RTN3 Entrez, Source	reticulon 3	6254	-0.004	0.2553	No
47	SDCCAG8	SDCCAG8 Entrez, Source	serologically defined colon cancer antigen 8	6273	-0.004	0.2543	No
48	LMNA	LMNA Entrez, Source	lamin A/C	6342	-0.005	0.2496	No
49	PADI2	PADI2 Entrez, Source	peptidyl arginine deiminase, type II	6353	-0.006	0.2493	No
50	PTMS	PTMS Entrez, Source	parathymosin	6405	-0.006	0.2460	No
51	KCNIP2	KCNIP2 Entrez, Source	Kv channel interacting protein 2	6562	-0.009	0.2350	No
52	ITGB1	ITGB1 Entrez, Source	integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	6774	-0.012	0.2201	No
53	HSPB2	HSPB2 Entrez, Source	heat shock 27kDa protein 2	6942	-0.014	0.2087	No
54	CDKN2C	CDKN2C Entrez, Source	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	7011	-0.015	0.2048	No
55	PPP2R1B	PPP2R1B Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform	7092	-0.017	0.2002	No
56	MADD	MADD Entrez, Source	MAP-kinase activating death domain	7149	-0.017	0.1975	No
57	SLC17A6	SLC17A6 Entrez, Source	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	7230	-0.019	0.1931	No
58	DNM3	DNM3 Entrez, Source	dynamin 3	7241	-0.019	0.1939	No
59	FRAG1	FRAG1 Entrez, Source	-	7258	-0.019	0.1943	No
60	FGF6	FGF6 Entrez, Source	fibroblast growth factor 6	7269	-0.019	0.1952	No
61	CD2	CD2 Entrez, Source	CD2 molecule	7323	-0.020	0.1929	No
62	TNNT2	TNNT2 Entrez, Source	troponin T type 2 (cardiac)	7380	-0.021	0.1905	No
63	POLD4	POLD4 Entrez, Source	polymerase (DNA-directed), delta 4	7902	-0.029	0.1536	No
64	TNNI3K	TNNI3K Entrez, Source	TNNI3 interacting kinase	8005	-0.031	0.1486	No
65	BRMS1	BRMS1 Entrez, Source	breast cancer metastasis suppressor 1	8014	-0.031	0.1507	No
66	ABCG4	ABCG4 Entrez, Source	ATP-binding cassette, sub-family G (WHITE), member 4	8132	-0.033	0.1447	No
67	DR1	DR1 Entrez, Source	down-regulator of transcription 1, TBP-binding (negative cofactor 2)	8351	-0.037	0.1313	No
68	IL18BP	IL18BP Entrez, Source	interleukin 18 binding protein	8393	-0.037	0.1314	No
69	IER5	IER5 Entrez, Source	immediate early response 5	8527	-0.039	0.1248	No
70	SYT8	SYT8 Entrez, Source	synaptotagmin VIII	8636	-0.041	0.1201	No
71	PVRL1	PVRL1 Entrez, Source	poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin)	8795	-0.044	0.1119	No
72	PRRX1	PRRX1 Entrez, Source	paired related homeobox 1	8971	-0.047	0.1027	No
73	NFKB2	NFKB2 Entrez, Source	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)	9267	-0.052	0.0849	No
74	VAX1	VAX1 Entrez, Source	ventral anterior homeobox 1	9319	-0.053	0.0856	No
75	MRGPRF	MRGPRF Entrez, Source	MAS-related GPR, member F	9403	-0.054	0.0840	No
76	FGFR2	FGFR2 Entrez, Source	ffer syndrome, Jackson-Weiss syndrome)	9465	-0.055	0.0841	No
77	ELF3	ELF3 Entrez, Source	E74-like factor 3 (ets domain transcription factor, epithelial-specific )	9517	-0.056	0.0851	No
78	CACNA1S	CACNA1S Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1S subunit	9910	-0.065	0.0610	No
79	SCNN1A	SCNN1A Entrez, Source	sodium channel, nonvoltage-gated 1 alpha	10199	-0.071	0.0454	No
80	SYT2	SYT2 Entrez, Source	synaptotagmin II	10209	-0.071	0.0507	No
81	IPO13	IPO13 Entrez, Source	importin 13	10265	-0.072	0.0527	No
82	JMJD1C	JMJD1C Entrez, Source	jumonji domain containing 1C	10296	-0.072	0.0567	No
83	SLK	SLK Entrez, Source	STE20-like kinase (yeast)	10306	-0.073	0.0622	No
84	MDK	MDK Entrez, Source	midkine (neurite growth-promoting factor 2)	10921	-0.089	0.0235	No
85	HMGN2	HMGN2 Entrez, Source	high-mobility group nucleosomal binding domain 2	11136	-0.094	0.0154	No
86	SIPA1	SIPA1 Entrez, Source	signal-induced proliferation-associated gene 1	11380	-0.101	0.0057	No
87	HDGF	HDGF Entrez, Source	hepatoma-derived growth factor (high-mobility group protein 1-like)	11565	-0.108	0.0011	No
88	CNN3	CNN3 Entrez, Source	calponin 3, acidic	11628	-0.110	0.0059	No
89	PTPRJ	PTPRJ Entrez, Source	protein tyrosine phosphatase, receptor type, J	11670	-0.112	0.0124	No
90	MUC1	MUC1 Entrez, Source	mucin 1, cell surface associated	11671	-0.112	0.0220	No
91	CHD4	CHD4 Entrez, Source	chromodomain helicase DNA binding protein 4	12051	-0.129	0.0045	No
92	LAMB3	LAMB3 Entrez, Source	laminin, beta 3	12600	-0.163	-0.0229	No
93	PRKCDBP	PRKCDBP Entrez, Source	protein kinase C, delta binding protein	12625	-0.165	-0.0106	No
94	NOTCH2	NOTCH2 Entrez, Source	Notch homolog 2 (Drosophila)	12769	-0.180	-0.0059	No
95	CYP26A1	CYP26A1 Entrez, Source	cytochrome P450, family 26, subfamily A, polypeptide 1	13087	-0.247	-0.0087	No
96	KIF1B	KIF1B Entrez, Source	kinesin family member 1B	13231	-0.325	0.0084	No