Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_48h.class.cls
#double_gel_8d_versus_double_gel_48h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in classdouble_gel_8d
GeneSetVEGF_MMMEC_6HRS_UP
Enrichment Score (ES)0.75278884
Normalized Enrichment Score (NES)2.2897975
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: VEGF_MMMEC_6HRS_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COL1A2COL1A2
Entrez,  Source
collagen, type I, alpha 261.1540.1790Yes
2MGPMGP
Entrez,  Source
matrix Gla protein520.6340.2742Yes
3ANKRD1ANKRD1
Entrez,  Source
ankyrin repeat domain 1 (cardiac muscle)930.5290.3535Yes
4CCL2CCL2
Entrez,  Source
chemokine (C-C motif) ligand 21450.4520.4199Yes
5BGNBGN
Entrez,  Source
biglycan1750.4080.4813Yes
6RGS5RGS5
Entrez,  Source
regulator of G-protein signalling 55130.2240.4907Yes
7VCAM1VCAM1
Entrez,  Source
vascular cell adhesion molecule 15160.2230.5253Yes
8AQP7AQP7
Entrez,  Source
aquaporin 75480.2170.5567Yes
9IGFBP3IGFBP3
Entrez,  Source
insulin-like growth factor binding protein 35710.2120.5880Yes
10SGCESGCE
Entrez,  Source
sarcoglycan, epsilon6500.1970.6128Yes
11RHOBRHOB
Entrez,  Source
ras homolog gene family, member B7090.1840.6371Yes
12DIRC2DIRC2
Entrez,  Source
disrupted in renal carcinoma 27100.1840.6657Yes
13FBP1FBP1
Entrez,  Source
fructose-1,6-bisphosphatase 17200.1820.6934Yes
14CCL7CCL7
Entrez,  Source
chemokine (C-C motif) ligand 78600.1610.7080Yes
15SULT1E1SULT1E1
Entrez,  Source
sulfotransferase family 1E, estrogen-preferring, member 19080.1560.7287Yes
16TFPI2TFPI2
Entrez,  Source
tissue factor pathway inhibitor 212410.1240.7231Yes
17NID2NID2
Entrez,  Source
nidogen 2 (osteonidogen)13490.1160.7331Yes
18BMP4BMP4
Entrez,  Source
bone morphogenetic protein 415060.1080.7382Yes
19FGFBP1FGFBP1
Entrez,  Source
fibroblast growth factor binding protein 115320.1060.7528Yes
20SDC4SDC4
Entrez,  Source
syndecan 4 (amphiglycan, ryudocan)33850.0450.6207No
21ADORA2BADORA2B
Entrez,  Source
adenosine A2b receptor36930.0390.6036No
22ELNELN
Entrez,  Source
elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)43860.0260.5556No
23SP3SP3
Entrez,  Source
Sp3 transcription factor49380.0160.5167No
24MMP2MMP2
Entrez,  Source
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)57800.0030.4540No
25OXTROXTR
Entrez,  Source
oxytocin receptor6165-0.0020.4255No
26PVALBPVALB
Entrez,  Source
parvalbumin6278-0.0040.4178No
27ESR1ESR1
Entrez,  Source
estrogen receptor 16300-0.0050.4169No
28GJA4GJA4
Entrez,  Source
gap junction protein, alpha 4, 37kDa (connexin 37)6909-0.0140.3733No
29ISL1ISL1
Entrez,  Source
ISL1 transcription factor, LIM/homeodomain, (islet-1)9336-0.0530.1993No
30CSPG2CSPG2
Entrez,  Source
chondroitin sulfate proteoglycan 2 (versican)9690-0.0600.1820No
31HTR2BHTR2B
Entrez,  Source
5-hydroxytryptamine (serotonin) receptor 2B10954-0.0890.1010No
32GSTT1GSTT1
Entrez,  Source
glutathione S-transferase theta 111104-0.0930.1044No
33SLC6A8SLC6A8
Entrez,  Source
solute carrier family 6 (neurotransmitter transporter, creatine), member 811161-0.0950.1149No
34FAPFAP
Entrez,  Source
fibroblast activation protein, alpha11212-0.0960.1261No
35THY1THY1
Entrez,  Source
Thy-1 cell surface antigen11400-0.1020.1279No
36UNGUNG
Entrez,  Source
uracil-DNA glycosylase11765-0.1160.1185No
Table: GSEA details [plain text format]



Fig 2: VEGF_MMMEC_6HRS_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: VEGF_MMMEC_6HRS_UP: Random ES distribution   
Gene set null distribution of ES for VEGF_MMMEC_6HRS_UP