Details for gene set VEGF_MMMEC_ALL

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_48h_repos
Upregulated in class	double_gel_8d
GeneSet	VEGF_MMMEC_ALL_UP
Enrichment Score (ES)	0.61833924
Normalized Enrichment Score (NES)	2.1075249
Nominal p-value	0.0
FDR q-value	0.0011050116
FWER p-Value	0.027

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	6	1.154	0.1224	Yes
2	MGP	MGP Entrez, Source	matrix Gla protein	52	0.634	0.1865	Yes
3	ANKRD1	ANKRD1 Entrez, Source	ankyrin repeat domain 1 (cardiac muscle)	93	0.529	0.2398	Yes
4	CCL2	CCL2 Entrez, Source	chemokine (C-C motif) ligand 2	145	0.452	0.2841	Yes
5	BGN	BGN Entrez, Source	biglycan	175	0.408	0.3254	Yes
6	CD9	CD9 Entrez, Source	CD9 molecule	283	0.320	0.3515	Yes
7	FOXO1A	FOXO1A Entrez, Source	forkhead box O1A (rhabdomyosarcoma)	411	0.256	0.3691	Yes
8	RGS5	RGS5 Entrez, Source	regulator of G-protein signalling 5	513	0.224	0.3853	Yes
9	VCAM1	VCAM1 Entrez, Source	vascular cell adhesion molecule 1	516	0.223	0.4090	Yes
10	AQP7	AQP7 Entrez, Source	aquaporin 7	548	0.217	0.4297	Yes
11	IGFBP3	IGFBP3 Entrez, Source	insulin-like growth factor binding protein 3	571	0.212	0.4506	Yes
12	SGCE	SGCE Entrez, Source	sarcoglycan, epsilon	650	0.197	0.4657	Yes
13	RHOB	RHOB Entrez, Source	ras homolog gene family, member B	709	0.184	0.4810	Yes
14	DIRC2	DIRC2 Entrez, Source	disrupted in renal carcinoma 2	710	0.184	0.5005	Yes
15	FBP1	FBP1 Entrez, Source	fructose-1,6-bisphosphatase 1	720	0.182	0.5193	Yes
16	IGF2BP3	IGF2BP3 Entrez, Source	insulin-like growth factor 2 mRNA binding protein 3	721	0.182	0.5387	Yes
17	CCL7	CCL7 Entrez, Source	chemokine (C-C motif) ligand 7	860	0.161	0.5454	Yes
18	SULT1E1	SULT1E1 Entrez, Source	sulfotransferase family 1E, estrogen-preferring, member 1	908	0.156	0.5585	Yes
19	HEXA	HEXA Entrez, Source	hexosaminidase A (alpha polypeptide)	1007	0.146	0.5666	Yes
20	CXCL1	CXCL1 Entrez, Source	chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)	1041	0.142	0.5793	Yes
21	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1043	0.142	0.5943	Yes
22	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	1241	0.124	0.5927	Yes
23	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	1349	0.116	0.5971	Yes
24	PIR	PIR Entrez, Source	pirin (iron-binding nuclear protein)	1402	0.113	0.6052	Yes
25	BMP4	BMP4 Entrez, Source	bone morphogenetic protein 4	1506	0.108	0.6089	Yes
26	FGFBP1	FGFBP1 Entrez, Source	fibroblast growth factor binding protein 1	1532	0.106	0.6183	Yes
27	TIE1	TIE1 Entrez, Source	tyrosine kinase with immunoglobulin-like and EGF-like domains 1	2769	0.061	0.5317	No
28	SDC4	SDC4 Entrez, Source	syndecan 4 (amphiglycan, ryudocan)	3385	0.045	0.4902	No
29	CEACAM1	CEACAM1 Entrez, Source	carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)	3419	0.045	0.4925	No
30	KDR	KDR Entrez, Source	kinase insert domain receptor (a type III receptor tyrosine kinase)	3567	0.041	0.4858	No
31	ADORA2B	ADORA2B Entrez, Source	adenosine A2b receptor	3693	0.039	0.4805	No
32	HCLS1	HCLS1 Entrez, Source	hematopoietic cell-specific Lyn substrate 1	4075	0.031	0.4552	No
33	ELN	ELN Entrez, Source	elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)	4386	0.026	0.4345	No
34	BMP6	BMP6 Entrez, Source	bone morphogenetic protein 6	4498	0.023	0.4287	No
35	HEMGN	HEMGN Entrez, Source	hemogen	4584	0.022	0.4246	No
36	GALNT1	GALNT1 Entrez, Source	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	4813	0.018	0.4093	No
37	SP3	SP3 Entrez, Source	Sp3 transcription factor	4938	0.016	0.4017	No
38	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	5143	0.012	0.3877	No
39	DYNLL1	DYNLL1 Entrez, Source	dynein, light chain, LC8-type 1	5673	0.005	0.3483	No
40	MMP2	MMP2 Entrez, Source	matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	5780	0.003	0.3406	No
41	OXTR	OXTR Entrez, Source	oxytocin receptor	6165	-0.002	0.3120	No
42	PDE4B	PDE4B Entrez, Source	phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila)	6239	-0.004	0.3069	No
43	PVALB	PVALB Entrez, Source	parvalbumin	6278	-0.004	0.3044	No
44	ESR1	ESR1 Entrez, Source	estrogen receptor 1	6300	-0.005	0.3034	No
45	MMP10	MMP10 Entrez, Source	matrix metallopeptidase 10 (stromelysin 2)	6646	-0.010	0.2784	No
46	GJA4	GJA4 Entrez, Source	gap junction protein, alpha 4, 37kDa (connexin 37)	6909	-0.014	0.2601	No
47	HSD11B2	HSD11B2 Entrez, Source	hydroxysteroid (11-beta) dehydrogenase 2	6935	-0.014	0.2597	No
48	NAGK	NAGK Entrez, Source	N-acetylglucosamine kinase	7266	-0.019	0.2369	No
49	ANGPT2	ANGPT2 Entrez, Source	angiopoietin 2	7458	-0.022	0.2248	No
50	UBD	UBD Entrez, Source	ubiquitin D	8096	-0.032	0.1803	No
51	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	8124	-0.033	0.1817	No
52	VWF	VWF Entrez, Source	von Willebrand factor	8376	-0.037	0.1668	No
53	EMR1	EMR1 Entrez, Source	egf-like module containing, mucin-like, hormone receptor-like 1	8911	-0.046	0.1314	No
54	ISL1	ISL1 Entrez, Source	ISL1 transcription factor, LIM/homeodomain, (islet-1)	9336	-0.053	0.1051	No
55	ADD2	ADD2 Entrez, Source	adducin 2 (beta)	9424	-0.055	0.1044	No
56	NDUFA1	NDUFA1 Entrez, Source	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa	9627	-0.058	0.0954	No
57	CSPG2	CSPG2 Entrez, Source	chondroitin sulfate proteoglycan 2 (versican)	9690	-0.060	0.0970	No
58	PRKCI	PRKCI Entrez, Source	protein kinase C, iota	10240	-0.071	0.0633	No
59	RANGAP1	RANGAP1 Entrez, Source	Ran GTPase activating protein 1	10603	-0.080	0.0445	No
60	HTR2B	HTR2B Entrez, Source	5-hydroxytryptamine (serotonin) receptor 2B	10954	-0.089	0.0276	No
61	GSTT1	GSTT1 Entrez, Source	glutathione S-transferase theta 1	11104	-0.093	0.0263	No
62	SLC6A8	SLC6A8 Entrez, Source	solute carrier family 6 (neurotransmitter transporter, creatine), member 8	11161	-0.095	0.0322	No
63	FAP	FAP Entrez, Source	fibroblast activation protein, alpha	11212	-0.096	0.0387	No
64	THY1	THY1 Entrez, Source	Thy-1 cell surface antigen	11400	-0.102	0.0355	No
65	UNG	UNG Entrez, Source	uracil-DNA glycosylase	11765	-0.116	0.0203	No
66	RALA	RALA Entrez, Source	v-ral simian leukemia viral oncogene homolog A (ras related)	12043	-0.128	0.0131	No
67	RBX1	RBX1 Entrez, Source	ring-box 1	12058	-0.129	0.0259	No
68	MRPL19	MRPL19 Entrez, Source	mitochondrial ribosomal protein L19	12073	-0.130	0.0387	No
69	PIM1	PIM1 Entrez, Source	pim-1 oncogene	12606	-0.164	0.0160	No
70	TRIM23	TRIM23 Entrez, Source	tripartite motif-containing 23	12662	-0.169	0.0299	No
71	GGH	GGH Entrez, Source	gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	12902	-0.200	0.0332	No