Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | WALKER_MM_SNP_DIFF |
| Enrichment Score (ES) | 0.62977743 |
| Normalized Enrichment Score (NES) | 1.865421 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.017341133 |
| FWER p-Value | 0.786 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 43 | 0.675 | 0.1865 | Yes |
| 2 | HMGCS2 | HMGCS2 Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 (mitochondrial) | 83 | 0.552 | 0.3390 | Yes |
| 3 | PRNP | PRNP Entrez, Source | prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia) | 141 | 0.455 | 0.4628 | Yes |
| 4 | BMP2 | BMP2 Entrez, Source | bone morphogenetic protein 2 | 164 | 0.430 | 0.5821 | Yes |
| 5 | HERPUD1 | HERPUD1 Entrez, Source | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 | 448 | 0.245 | 0.6298 | Yes |
| 6 | ASAH1 | ASAH1 Entrez, Source | N-acylsphingosine amidohydrolase (acid ceramidase) 1 | 1310 | 0.119 | 0.5986 | No |
| 7 | GABARAPL2 | GABARAPL2 Entrez, Source | GABA(A) receptor-associated protein-like 2 | 1687 | 0.098 | 0.5979 | No |
| 8 | ZFP36L1 | ZFP36L1 Entrez, Source | zinc finger protein 36, C3H type-like 1 | 2445 | 0.070 | 0.5606 | No |
| 9 | TM9SF2 | TM9SF2 Entrez, Source | transmembrane 9 superfamily member 2 | 2711 | 0.062 | 0.5583 | No |
| 10 | LAMP1 | LAMP1 Entrez, Source | lysosomal-associated membrane protein 1 | 2821 | 0.060 | 0.5668 | No |
| 11 | MAP1LC3B | MAP1LC3B Entrez, Source | microtubule-associated protein 1 light chain 3 beta | 2854 | 0.059 | 0.5810 | No |
| 12 | TPST2 | TPST2 Entrez, Source | tyrosylprotein sulfotransferase 2 | 2856 | 0.059 | 0.5974 | No |
| 13 | PTP4A1 | PTP4A1 Entrez, Source | protein tyrosine phosphatase type IVA, member 1 | 3208 | 0.049 | 0.5849 | No |
| 14 | ACTN1 | ACTN1 Entrez, Source | actinin, alpha 1 | 3213 | 0.049 | 0.5985 | No |
| 15 | HMGB1 | HMGB1 Entrez, Source | high-mobility group box 1 | 3490 | 0.043 | 0.5899 | No |
| 16 | SEPP1 | SEPP1 Entrez, Source | selenoprotein P, plasma, 1 | 3625 | 0.040 | 0.5911 | No |
| 17 | GABARAP | GABARAP Entrez, Source | GABA(A) receptor-associated protein | 4718 | 0.020 | 0.5146 | No |
| 18 | ACADM | ACADM Entrez, Source | acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain | 4941 | 0.016 | 0.5025 | No |
| 19 | DSTN | DSTN Entrez, Source | destrin (actin depolymerizing factor) | 5815 | 0.003 | 0.4376 | No |
| 20 | ESR1 | ESR1 Entrez, Source | estrogen receptor 1 | 6300 | -0.005 | 0.4026 | No |
| 21 | SENP3 | SENP3 Entrez, Source | SUMO1/sentrin/SMT3 specific peptidase 3 | 6903 | -0.014 | 0.3612 | No |
| 22 | KCND3 | KCND3 Entrez, Source | potassium voltage-gated channel, Shal-related subfamily, member 3 | 7184 | -0.018 | 0.3452 | No |
| 23 | GFRA2 | GFRA2 Entrez, Source | GDNF family receptor alpha 2 | 7521 | -0.023 | 0.3264 | No |
| 24 | WDR1 | WDR1 Entrez, Source | WD repeat domain 1 | 7900 | -0.029 | 0.3062 | No |
| 25 | TPT1 | TPT1 Entrez, Source | tumor protein, translationally-controlled 1 | 7952 | -0.030 | 0.3108 | No |
| 26 | CNGB1 | CNGB1 Entrez, Source | cyclic nucleotide gated channel beta 1 | 7955 | -0.030 | 0.3191 | No |
| 27 | SAP18 | SAP18 Entrez, Source | Sin3A-associated protein, 18kDa | 8573 | -0.040 | 0.2840 | No |
| 28 | TOM1 | TOM1 Entrez, Source | target of myb1 (chicken) | 9621 | -0.058 | 0.2217 | No |
| 29 | RPL13 | RPL13 Entrez, Source | ribosomal protein L13 | 11351 | -0.100 | 0.1201 | No |
| 30 | GTF3A | GTF3A Entrez, Source | general transcription factor IIIA | 11457 | -0.104 | 0.1416 | No |
