Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | WOUND_HEALING |
| Enrichment Score (ES) | 0.61742985 |
| Normalized Enrichment Score (NES) | 1.8498951 |
| Nominal p-value | 0.0018621974 |
| FDR q-value | 0.018565366 |
| FWER p-Value | 0.845 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | SERPINE1 | SERPINE1 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 56 | 0.628 | 0.1123 | Yes |
| 2 | F2R | F2R Entrez, Source | coagulation factor II (thrombin) receptor | 142 | 0.455 | 0.1904 | Yes |
| 3 | F13A1 | F13A1 Entrez, Source | coagulation factor XIII, A1 polypeptide | 163 | 0.430 | 0.2688 | Yes |
| 4 | PLAT | PLAT Entrez, Source | plasminogen activator, tissue | 230 | 0.365 | 0.3315 | Yes |
| 5 | TFPI | TFPI Entrez, Source | tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) | 316 | 0.294 | 0.3797 | Yes |
| 6 | THBD | THBD Entrez, Source | thrombomodulin | 474 | 0.236 | 0.4117 | Yes |
| 7 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 506 | 0.226 | 0.4513 | Yes |
| 8 | CD59 | CD59 Entrez, Source | CD59 molecule, complement regulatory protein | 533 | 0.219 | 0.4900 | Yes |
| 9 | F9 | F9 Entrez, Source | coagulation factor IX (plasma thromboplastic component, Christmas disease, hemophilia B) | 572 | 0.212 | 0.5265 | Yes |
| 10 | TGFB2 | TGFB2 Entrez, Source | transforming growth factor, beta 2 | 659 | 0.195 | 0.5562 | Yes |
| 11 | DCBLD2 | DCBLD2 Entrez, Source | discoidin, CUB and LCCL domain containing 2 | 852 | 0.162 | 0.5718 | Yes |
| 12 | GGCX | GGCX Entrez, Source | gamma-glutamyl carboxylase | 1027 | 0.144 | 0.5855 | Yes |
| 13 | APOA5 | APOA5 Entrez, Source | apolipoprotein A-V | 1126 | 0.134 | 0.6031 | Yes |
| 14 | F12 | F12 Entrez, Source | coagulation factor XII (Hageman factor) | 1243 | 0.124 | 0.6174 | Yes |
| 15 | ACVRL1 | ACVRL1 Entrez, Source | activin A receptor type II-like 1 | 1574 | 0.104 | 0.6119 | No |
| 16 | GNA12 | GNA12 Entrez, Source | guanine nucleotide binding protein (G protein) alpha 12 | 2156 | 0.079 | 0.5829 | No |
| 17 | PROC | PROC Entrez, Source | protein C (inactivator of coagulation factors Va and VIIIa) | 2636 | 0.064 | 0.5587 | No |
| 18 | GNAQ | GNAQ Entrez, Source | guanine nucleotide binding protein (G protein), q polypeptide | 2897 | 0.057 | 0.5499 | No |
| 19 | EREG | EREG Entrez, Source | epiregulin | 3011 | 0.054 | 0.5514 | No |
| 20 | KLK8 | KLK8 Entrez, Source | kallikrein 8 (neuropsin/ovasin) | 4644 | 0.021 | 0.4327 | No |
| 21 | GP9 | GP9 Entrez, Source | glycoprotein IX (platelet) | 4705 | 0.020 | 0.4318 | No |
| 22 | F8 | F8 Entrez, Source | coagulation factor VIII, procoagulant component (hemophilia A) | 4861 | 0.017 | 0.4234 | No |
| 23 | F2 | F2 Entrez, Source | coagulation factor II (thrombin) | 5289 | 0.010 | 0.3932 | No |
| 24 | CD40LG | CD40LG Entrez, Source | CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome) | 6517 | -0.008 | 0.3025 | No |
| 25 | F2RL2 | F2RL2 Entrez, Source | coagulation factor II (thrombin) receptor-like 2 | 6563 | -0.009 | 0.3007 | No |
| 26 | F10 | F10 Entrez, Source | coagulation factor X | 7895 | -0.029 | 0.2061 | No |
| 27 | PROS1 | PROS1 Entrez, Source | protein S (alpha) | 7951 | -0.030 | 0.2075 | No |
| 28 | ADORA2A | ADORA2A Entrez, Source | adenosine A2a receptor | 8048 | -0.032 | 0.2062 | No |
| 29 | ENTPD1 | ENTPD1 Entrez, Source | ectonucleoside triphosphate diphosphohydrolase 1 | 8353 | -0.037 | 0.1901 | No |
| 30 | VWF | VWF Entrez, Source | von Willebrand factor | 8376 | -0.037 | 0.1953 | No |
| 31 | NF1 | NF1 Entrez, Source | neurofibromin 1 (neurofibromatosis, von Recklinghausen disease, Watson disease) | 10739 | -0.084 | 0.0334 | No |
| 32 | PLG | PLG Entrez, Source | plasminogen | 10845 | -0.087 | 0.0416 | No |
| 33 | F2RL3 | F2RL3 Entrez, Source | coagulation factor II (thrombin) receptor-like 3 | 11037 | -0.091 | 0.0442 | No |
| 34 | LMAN1 | LMAN1 Entrez, Source | lectin, mannose-binding, 1 | 11178 | -0.095 | 0.0513 | No |
| 35 | PABPC4 | PABPC4 Entrez, Source | poly(A) binding protein, cytoplasmic 4 (inducible form) | 11571 | -0.108 | 0.0419 | No |
| 36 | HNF4A | HNF4A Entrez, Source | hepatocyte nuclear factor 4, alpha | 12338 | -0.145 | 0.0112 | No |
| 37 | C4BPB | C4BPB Entrez, Source | complement component 4 binding protein, beta | 13250 | -0.346 | 0.0069 | No |
