Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | YTAAYNGCT_UNKNOWN |
| Enrichment Score (ES) | 0.52800125 |
| Normalized Enrichment Score (NES) | 1.7764804 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0297527 |
| FWER p-Value | 0.982 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | CCND2 | CCND2 Entrez, Source | cyclin D2 | 10 | 0.885 | 0.1167 | Yes |
| 2 | DBP | DBP Entrez, Source | D site of albumin promoter (albumin D-box) binding protein | 41 | 0.688 | 0.2056 | Yes |
| 3 | EGR2 | EGR2 Entrez, Source | early growth response 2 (Krox-20 homolog, Drosophila) | 87 | 0.537 | 0.2735 | Yes |
| 4 | AMPD3 | AMPD3 Entrez, Source | adenosine monophosphate deaminase (isoform E) | 167 | 0.426 | 0.3241 | Yes |
| 5 | CDH13 | CDH13 Entrez, Source | cadherin 13, H-cadherin (heart) | 223 | 0.366 | 0.3685 | Yes |
| 6 | PEA15 | PEA15 Entrez, Source | phosphoprotein enriched in astrocytes 15 | 279 | 0.322 | 0.4071 | Yes |
| 7 | ATF3 | ATF3 Entrez, Source | activating transcription factor 3 | 310 | 0.299 | 0.4446 | Yes |
| 8 | TYRO3 | TYRO3 Entrez, Source | TYRO3 protein tyrosine kinase | 321 | 0.292 | 0.4826 | Yes |
| 9 | CLDN3 | CLDN3 Entrez, Source | claudin 3 | 788 | 0.172 | 0.4703 | Yes |
| 10 | LMO4 | LMO4 Entrez, Source | LIM domain only 4 | 808 | 0.169 | 0.4912 | Yes |
| 11 | PPARGC1A | PPARGC1A Entrez, Source | peroxisome proliferative activated receptor, gamma, coactivator 1, alpha | 1181 | 0.130 | 0.4804 | Yes |
| 12 | ASAH1 | ASAH1 Entrez, Source | N-acylsphingosine amidohydrolase (acid ceramidase) 1 | 1310 | 0.119 | 0.4865 | Yes |
| 13 | SLC6A6 | SLC6A6 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, taurine), member 6 | 1323 | 0.118 | 0.5013 | Yes |
| 14 | PHEX | PHEX Entrez, Source | phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) | 1351 | 0.116 | 0.5147 | Yes |
| 15 | ACCN3 | ACCN3 Entrez, Source | amiloride-sensitive cation channel 3 | 1378 | 0.115 | 0.5279 | Yes |
| 16 | DCX | DCX Entrez, Source | doublecortex; lissencephaly, X-linked (doublecortin) | 1708 | 0.097 | 0.5160 | Yes |
| 17 | HSD11B1 | HSD11B1 Entrez, Source | hydroxysteroid (11-beta) dehydrogenase 1 | 1720 | 0.096 | 0.5280 | Yes |
| 18 | CHRDL1 | CHRDL1 Entrez, Source | chordin-like 1 | 2170 | 0.078 | 0.5046 | No |
| 19 | OTX2 | OTX2 Entrez, Source | orthodenticle homolog 2 (Drosophila) | 2173 | 0.078 | 0.5148 | No |
| 20 | ZFP36L1 | ZFP36L1 Entrez, Source | zinc finger protein 36, C3H type-like 1 | 2445 | 0.070 | 0.5036 | No |
| 21 | VAMP3 | VAMP3 Entrez, Source | vesicle-associated membrane protein 3 (cellubrevin) | 2906 | 0.057 | 0.4766 | No |
| 22 | ZFHX1B | ZFHX1B Entrez, Source | zinc finger homeobox 1b | 3081 | 0.052 | 0.4704 | No |
| 23 | PTGFR | PTGFR Entrez, Source | prostaglandin F receptor (FP) | 3331 | 0.047 | 0.4578 | No |
| 24 | CCKAR | CCKAR Entrez, Source | cholecystokinin A receptor | 4154 | 0.030 | 0.3999 | No |
| 25 | FGF7 | FGF7 Entrez, Source | fibroblast growth factor 7 (keratinocyte growth factor) | 4156 | 0.030 | 0.4038 | No |
| 26 | CREM | CREM Entrez, Source | cAMP responsive element modulator | 4794 | 0.019 | 0.3583 | No |
| 27 | GATA3 | GATA3 Entrez, Source | GATA binding protein 3 | 5124 | 0.013 | 0.3353 | No |
| 28 | PHYHIP | PHYHIP Entrez, Source | phytanoyl-CoA 2-hydroxylase interacting protein | 5694 | 0.004 | 0.2930 | No |
| 29 | DIO2 | DIO2 Entrez, Source | deiodinase, iodothyronine, type II | 5720 | 0.004 | 0.2916 | No |
| 30 | LIMK2 | LIMK2 Entrez, Source | LIM domain kinase 2 | 5743 | 0.004 | 0.2905 | No |
| 31 | H2AFZ | H2AFZ Entrez, Source | H2A histone family, member Z | 5766 | 0.003 | 0.2892 | No |
| 32 | ACVR1C | ACVR1C Entrez, Source | activin A receptor, type IC | 5866 | 0.002 | 0.2820 | No |
| 33 | H3F3B | H3F3B Entrez, Source | H3 histone, family 3B (H3.3B) | 6064 | -0.001 | 0.2673 | No |
| 34 | POFUT1 | POFUT1 Entrez, Source | protein O-fucosyltransferase 1 | 6632 | -0.010 | 0.2259 | No |
| 35 | APLN | APLN Entrez, Source | apelin, AGTRL1 ligand | 6665 | -0.010 | 0.2248 | No |
| 36 | CTCF | CTCF Entrez, Source | CCCTC-binding factor (zinc finger protein) | 6862 | -0.013 | 0.2118 | No |
| 37 | OTX1 | OTX1 Entrez, Source | orthodenticle homolog 1 (Drosophila) | 6913 | -0.014 | 0.2099 | No |
| 38 | NRXN1 | NRXN1 Entrez, Source | neurexin 1 | 7337 | -0.020 | 0.1807 | No |
| 39 | RAB27A | RAB27A Entrez, Source | RAB27A, member RAS oncogene family | 7609 | -0.024 | 0.1635 | No |
| 40 | CSPG4 | CSPG4 Entrez, Source | chondroitin sulfate proteoglycan 4 (melanoma-associated) | 7698 | -0.026 | 0.1603 | No |
| 41 | KCNIP4 | KCNIP4 Entrez, Source | Kv channel interacting protein 4 | 7991 | -0.031 | 0.1424 | No |
| 42 | CITED1 | CITED1 Entrez, Source | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 | 8127 | -0.033 | 0.1366 | No |
| 43 | RAP2B | RAP2B Entrez, Source | RAP2B, member of RAS oncogene family | 9009 | -0.047 | 0.0765 | No |
| 44 | NUDT4 | NUDT4 Entrez, Source | nudix (nucleoside diphosphate linked moiety X)-type motif 4 | 9097 | -0.049 | 0.0764 | No |
| 45 | WNT16 | WNT16 Entrez, Source | wingless-type MMTV integration site family, member 16 | 9215 | -0.051 | 0.0744 | No |
| 46 | HHEX | HHEX Entrez, Source | homeobox, hematopoietically expressed | 9234 | -0.051 | 0.0798 | No |
| 47 | AMPH | AMPH Entrez, Source | amphiphysin (Stiff-Man syndrome with breast cancer 128kDa autoantigen) | 9358 | -0.053 | 0.0777 | No |
| 48 | TPI1 | TPI1 Entrez, Source | triosephosphate isomerase 1 | 9804 | -0.062 | 0.0524 | No |
| 49 | PPP2R2B | PPP2R2B Entrez, Source | protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform | 10000 | -0.066 | 0.0465 | No |
| 50 | HTR2C | HTR2C Entrez, Source | 5-hydroxytryptamine (serotonin) receptor 2C | 10920 | -0.088 | -0.0109 | No |
| 51 | ITGB3BP | ITGB3BP Entrez, Source | integrin beta 3 binding protein (beta3-endonexin) | 10965 | -0.089 | -0.0024 | No |
| 52 | FGF17 | FGF17 Entrez, Source | fibroblast growth factor 17 | 11001 | -0.090 | 0.0070 | No |
| 53 | FAP | FAP Entrez, Source | fibroblast activation protein, alpha | 11212 | -0.096 | 0.0039 | No |
| 54 | GAD1 | GAD1 Entrez, Source | glutamate decarboxylase 1 (brain, 67kDa) | 11300 | -0.099 | 0.0104 | No |
| 55 | PCBP2 | PCBP2 Entrez, Source | poly(rC) binding protein 2 | 11388 | -0.102 | 0.0174 | No |
| 56 | DOCK11 | DOCK11 Entrez, Source | dedicator of cytokinesis 11 | 11638 | -0.111 | 0.0133 | No |
| 57 | HNRPC | HNRPC Entrez, Source | heterogeneous nuclear ribonucleoprotein C (C1/C2) | 11740 | -0.115 | 0.0209 | No |
| 58 | PRKCBP1 | PRKCBP1 Entrez, Source | protein kinase C binding protein 1 | 11848 | -0.119 | 0.0287 | No |
| 59 | VLDLR | VLDLR Entrez, Source | very low density lipoprotein receptor | 12037 | -0.128 | 0.0315 | No |
| 60 | RPS6KB1 | RPS6KB1 Entrez, Source | ribosomal protein S6 kinase, 70kDa, polypeptide 1 | 12044 | -0.129 | 0.0481 | No |
| 61 | BMF | BMF Entrez, Source | Bcl2 modifying factor | 12411 | -0.149 | 0.0404 | No |
| 62 | NUP54 | NUP54 Entrez, Source | nucleoporin 54kDa | 13023 | -0.224 | 0.0240 | No |
