Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_48h |
| GeneSet | YU_CMYC_UP |
| Enrichment Score (ES) | -0.6614312 |
| Normalized Enrichment Score (NES) | -1.8221227 |
| Nominal p-value | 0.0022522523 |
| FDR q-value | 0.04339586 |
| FWER p-Value | 0.84 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | CDC2A | 1363 | 0.115 | -0.0549 | No | ||
| 2 | FDPS | FDPS Entrez, Source | farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) | 3902 | 0.035 | -0.2311 | No |
| 3 | E2F8 | E2F8 Entrez, Source | E2F transcription factor 8 | 5781 | 0.003 | -0.3708 | No |
| 4 | BIRC5 | BIRC5 Entrez, Source | baculoviral IAP repeat-containing 5 (survivin) | 7015 | -0.015 | -0.4571 | No |
| 5 | CDKN3 | CDKN3 Entrez, Source | cyclin-dependent kinase inhibitor 3 (CDK2-associated dual specificity phosphatase) | 9384 | -0.054 | -0.6127 | No |
| 6 | BRCA2 | BRCA2 Entrez, Source | breast cancer 2, early onset | 9692 | -0.060 | -0.6112 | No |
| 7 | TXN1 | 9737 | -0.061 | -0.5896 | No | ||
| 8 | PLK1 | PLK1 Entrez, Source | polo-like kinase 1 (Drosophila) | 10056 | -0.067 | -0.5857 | No |
| 9 | TOP2A | TOP2A Entrez, Source | topoisomerase (DNA) II alpha 170kDa | 11066 | -0.092 | -0.6235 | Yes |
| 10 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 11131 | -0.094 | -0.5897 | Yes |
| 11 | HMGN2 | HMGN2 Entrez, Source | high-mobility group nucleosomal binding domain 2 | 11136 | -0.094 | -0.5513 | Yes |
| 12 | UCHL5 | UCHL5 Entrez, Source | ubiquitin carboxyl-terminal hydrolase L5 | 11355 | -0.100 | -0.5264 | Yes |
| 13 | CCNB2 | CCNB2 Entrez, Source | cyclin B2 | 12025 | -0.128 | -0.5241 | Yes |
| 14 | CSDA | CSDA Entrez, Source | cold shock domain protein A | 12392 | -0.148 | -0.4907 | Yes |
| 15 | IDI1 | IDI1 Entrez, Source | isopentenyl-diphosphate delta isomerase 1 | 12532 | -0.157 | -0.4365 | Yes |
| 16 | TSPAN4 | TSPAN4 Entrez, Source | tetraspanin 4 | 12548 | -0.158 | -0.3726 | Yes |
| 17 | AURKA | AURKA Entrez, Source | aurora kinase A | 12673 | -0.170 | -0.3118 | Yes |
| 18 | NUP54 | NUP54 Entrez, Source | nucleoporin 54kDa | 13023 | -0.224 | -0.2460 | Yes |
| 19 | NUDCD2 | NUDCD2 Entrez, Source | NudC domain containing 2 | 13145 | -0.267 | -0.1452 | Yes |
| 20 | CLIC4 | CLIC4 Entrez, Source | chloride intracellular channel 4 | 13274 | -0.389 | 0.0051 | Yes |
