Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_48h.class.cls #double_gel_8d_versus_double_gel_48h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_48h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | ZHAN_MULTIPLE_MYELOMA_VS_NORMAL_DN |
| Enrichment Score (ES) | 0.71760345 |
| Normalized Enrichment Score (NES) | 2.043847 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.002676429 |
| FWER p-Value | 0.1 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 6 | 1.154 | 0.2193 | Yes |
| 2 | CD24 | CD24 Entrez, Source | CD24 molecule | 26 | 0.771 | 0.3647 | Yes |
| 3 | APOC1 | APOC1 Entrez, Source | apolipoprotein C-I | 151 | 0.445 | 0.4402 | Yes |
| 4 | LYZ | LYZ Entrez, Source | lysozyme (renal amyloidosis) | 153 | 0.442 | 0.5243 | Yes |
| 5 | PRKAR2B | PRKAR2B Entrez, Source | protein kinase, cAMP-dependent, regulatory, type II, beta | 160 | 0.434 | 0.6066 | Yes |
| 6 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 506 | 0.226 | 0.6237 | Yes |
| 7 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 516 | 0.223 | 0.6656 | Yes |
| 8 | IGF2BP3 | IGF2BP3 Entrez, Source | insulin-like growth factor 2 mRNA binding protein 3 | 721 | 0.182 | 0.6850 | Yes |
| 9 | ALDH1A1 | ALDH1A1 Entrez, Source | aldehyde dehydrogenase 1 family, member A1 | 739 | 0.178 | 0.7176 | Yes |
| 10 | RNASE6 | RNASE6 Entrez, Source | ribonuclease, RNase A family, k6 | 1246 | 0.124 | 0.7033 | No |
| 11 | SMPDL3A | SMPDL3A Entrez, Source | sphingomyelin phosphodiesterase, acid-like 3A | 1863 | 0.090 | 0.6741 | No |
| 12 | CEBPD | CEBPD Entrez, Source | CCAAT/enhancer binding protein (C/EBP), delta | 1977 | 0.086 | 0.6820 | No |
| 13 | CTSH | CTSH Entrez, Source | cathepsin H | 2723 | 0.062 | 0.6378 | No |
| 14 | PYGL | PYGL Entrez, Source | phosphorylase, glycogen; liver (Hers disease, glycogen storage disease type VI) | 2995 | 0.054 | 0.6279 | No |
| 15 | HNMT | HNMT Entrez, Source | histamine N-methyltransferase | 3098 | 0.052 | 0.6301 | No |
| 16 | SYK | SYK Entrez, Source | spleen tyrosine kinase | 3649 | 0.040 | 0.5963 | No |
| 17 | LST1 | LST1 Entrez, Source | leukocyte specific transcript 1 | 5138 | 0.013 | 0.4870 | No |
| 18 | LCN2 | LCN2 Entrez, Source | lipocalin 2 (oncogene 24p3) | 5175 | 0.012 | 0.4866 | No |
| 19 | CXCL12 | CXCL12 Entrez, Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 5302 | 0.010 | 0.4790 | No |
| 20 | AIF1 | AIF1 Entrez, Source | allograft inflammatory factor 1 | 7788 | -0.027 | 0.2976 | No |
| 21 | MSX1 | MSX1 Entrez, Source | msh homeobox homolog 1 (Drosophila) | 8144 | -0.033 | 0.2772 | No |
| 22 | GP5 | GP5 Entrez, Source | glycoprotein V (platelet) | 8293 | -0.036 | 0.2729 | No |
| 23 | HHEX | HHEX Entrez, Source | homeobox, hematopoietically expressed | 9234 | -0.051 | 0.2120 | No |
| 24 | ELA2 | ELA2 Entrez, Source | elastase 2, neutrophil | 9637 | -0.058 | 0.1930 | No |
| 25 | S100A9 | S100A9 Entrez, Source | S100 calcium binding protein A9 | 9785 | -0.062 | 0.1937 | No |
| 26 | CD99 | CD99 Entrez, Source | CD99 molecule | 9921 | -0.065 | 0.1959 | No |
| 27 | ITGB2 | ITGB2 Entrez, Source | integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) | 10432 | -0.076 | 0.1720 | No |
| 28 | TOMM40 | TOMM40 Entrez, Source | translocase of outer mitochondrial membrane 40 homolog (yeast) | 11720 | -0.114 | 0.0970 | No |
| 29 | A2M | A2M Entrez, Source | alpha-2-macroglobulin | 12069 | -0.130 | 0.0956 | No |
