Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | AS3_FIBRO_DN |
| Enrichment Score (ES) | 0.645395 |
| Normalized Enrichment Score (NES) | 1.7436967 |
| Nominal p-value | 0.013133208 |
| FDR q-value | 0.042856358 |
| FWER p-Value | 0.999 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MAP3K8 | MAP3K8 Entrez, Source | mitogen-activated protein kinase kinase kinase 8 | 27 | 0.668 | 0.2037 | Yes |
| 2 | CCL2 | CCL2 Entrez, Source | chemokine (C-C motif) ligand 2 | 76 | 0.477 | 0.3469 | Yes |
| 3 | TNFAIP6 | TNFAIP6 Entrez, Source | tumor necrosis factor, alpha-induced protein 6 | 117 | 0.402 | 0.4678 | Yes |
| 4 | CXCL2 | CXCL2 Entrez, Source | chemokine (C-X-C motif) ligand 2 | 118 | 0.402 | 0.5915 | Yes |
| 5 | JUN | JUN Entrez, Source | jun oncogene | 458 | 0.194 | 0.6257 | Yes |
| 6 | JUNB | JUNB Entrez, Source | jun B proto-oncogene | 866 | 0.132 | 0.6359 | Yes |
| 7 | L1CAM | L1CAM Entrez, Source | L1 cell adhesion molecule | 1321 | 0.103 | 0.6336 | Yes |
| 8 | CXCL1 | CXCL1 Entrez, Source | chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha) | 1541 | 0.092 | 0.6454 | Yes |
| 9 | CRABP2 | CRABP2 Entrez, Source | cellular retinoic acid binding protein 2 | 2566 | 0.058 | 0.5864 | No |
| 10 | F11R | F11R Entrez, Source | F11 receptor | 3201 | 0.045 | 0.5526 | No |
| 11 | EGR1 | EGR1 Entrez, Source | early growth response 1 | 3274 | 0.043 | 0.5604 | No |
| 12 | EIF4E | EIF4E Entrez, Source | eukaryotic translation initiation factor 4E | 3538 | 0.038 | 0.5524 | No |
| 13 | CDC42 | CDC42 Entrez, Source | cell division cycle 42 (GTP binding protein, 25kDa) | 5202 | 0.013 | 0.4314 | No |
| 14 | RAB3A | RAB3A Entrez, Source | RAB3A, member RAS oncogene family | 7105 | -0.012 | 0.2923 | No |
| 15 | NR2F6 | NR2F6 Entrez, Source | nuclear receptor subfamily 2, group F, member 6 | 8452 | -0.030 | 0.2006 | No |
| 16 | PGF | PGF Entrez, Source | placental growth factor, vascular endothelial growth factor-related protein | 9350 | -0.043 | 0.1463 | No |
| 17 | MAP2K1 | MAP2K1 Entrez, Source | mitogen-activated protein kinase kinase 1 | 10278 | -0.058 | 0.0946 | No |
| 18 | PLAU | PLAU Entrez, Source | plasminogen activator, urokinase | 10548 | -0.063 | 0.0939 | No |
| 19 | GRB2 | GRB2 Entrez, Source | growth factor receptor-bound protein 2 | 11132 | -0.077 | 0.0737 | No |
| 20 | EGFR | EGFR Entrez, Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 11286 | -0.081 | 0.0871 | No |
| 21 | TAPBP | TAPBP Entrez, Source | TAP binding protein (tapasin) | 12109 | -0.108 | 0.0586 | No |
| 22 | ELK1 | ELK1 Entrez, Source | ELK1, member of ETS oncogene family | 12168 | -0.110 | 0.0881 | No |
