Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | BOQUEST_CD31PLUS_VS_CD31MINUS_DN |
Enrichment Score (ES) | 0.5198921 |
Normalized Enrichment Score (NES) | 1.9937094 |
Nominal p-value | 0.0 |
FDR q-value | 0.0061888862 |
FWER p-Value | 0.232 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | COL1A2 | COL1A2 Entrez,  Source | collagen, type I, alpha 2 | 3 | 1.046 | 0.0594 | Yes |
2 | COL3A1 | COL3A1 Entrez,  Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 15 | 0.737 | 0.1006 | Yes |
3 | BHLHB3 | BHLHB3 Entrez,  Source | basic helix-loop-helix domain containing, class B, 3 | 23 | 0.682 | 0.1389 | Yes |
4 | COL5A2 | COL5A2 Entrez,  Source | collagen, type V, alpha 2 | 28 | 0.668 | 0.1767 | Yes |
5 | MGP | MGP Entrez,  Source | matrix Gla protein | 62 | 0.533 | 0.2046 | Yes |
6 | MRC2 | MRC2 Entrez,  Source | mannose receptor, C type 2 | 72 | 0.485 | 0.2316 | Yes |
7 | OMD | OMD Entrez,  Source | osteomodulin | 79 | 0.470 | 0.2579 | Yes |
8 | LOX | LOX Entrez,  Source | lysyl oxidase | 82 | 0.465 | 0.2843 | Yes |
9 | SERPINE2 | SERPINE2 Entrez,  Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 | 104 | 0.424 | 0.3069 | Yes |
10 | TNFAIP6 | TNFAIP6 Entrez,  Source | tumor necrosis factor, alpha-induced protein 6 | 117 | 0.402 | 0.3289 | Yes |
11 | PRELP | PRELP Entrez,  Source | proline/arginine-rich end leucine-rich repeat protein | 119 | 0.401 | 0.3517 | Yes |
12 | FST | FST Entrez,  Source | follistatin | 132 | 0.388 | 0.3729 | Yes |
13 | CRYAB | CRYAB Entrez,  Source | crystallin, alpha B | 141 | 0.371 | 0.3935 | Yes |
14 | CFD | CFD Entrez,  Source | complement factor D (adipsin) | 337 | 0.234 | 0.3920 | Yes |
15 | EMP3 | EMP3 Entrez,  Source | epithelial membrane protein 3 | 358 | 0.227 | 0.4035 | Yes |
16 | GSN | GSN Entrez,  Source | gelsolin (amyloidosis, Finnish type) | 417 | 0.205 | 0.4107 | Yes |
17 | F3 | F3 Entrez,  Source | coagulation factor III (thromboplastin, tissue factor) | 418 | 0.205 | 0.4224 | Yes |
18 | S100A4 | S100A4 Entrez,  Source | S100 calcium binding protein A4 | 450 | 0.195 | 0.4312 | Yes |
19 | COL6A2 | COL6A2 Entrez,  Source | collagen, type VI, alpha 2 | 460 | 0.193 | 0.4415 | Yes |
20 | FEZ1 | FEZ1 Entrez,  Source | fasciculation and elongation protein zeta 1 (zygin I) | 468 | 0.190 | 0.4518 | Yes |
21 | FBN1 | FBN1 Entrez,  Source | fibrillin 1 | 483 | 0.185 | 0.4613 | Yes |
22 | SGCE | SGCE Entrez,  Source | sarcoglycan, epsilon | 484 | 0.185 | 0.4719 | Yes |
23 | IGFBP3 | IGFBP3 Entrez,  Source | insulin-like growth factor binding protein 3 | 567 | 0.170 | 0.4754 | Yes |
24 | SCRN1 | SCRN1 Entrez,  Source | secernin 1 | 568 | 0.170 | 0.4851 | Yes |
25 | TSPAN8 | TSPAN8 Entrez,  Source | tetraspanin 8 | 659 | 0.156 | 0.4872 | Yes |
26 | COL1A1 | COL1A1 Entrez,  Source | collagen, type I, alpha 1 | 738 | 0.146 | 0.4895 | Yes |
27 | PLAGL1 | PLAGL1 Entrez,  Source | pleiomorphic adenoma gene-like 1 | 742 | 0.145 | 0.4976 | Yes |
28 | PLA2G4A | PLA2G4A Entrez,  Source | phospholipase A2, group IVA (cytosolic, calcium-dependent) | 812 | 0.139 | 0.5003 | Yes |
29 | TWIST1 | TWIST1 Entrez,  Source | twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila) | 978 | 0.123 | 0.4948 | Yes |
30 | LIF | LIF Entrez,  Source | leukemia inhibitory factor (cholinergic differentiation factor) | 1037 | 0.118 | 0.4972 | Yes |
31 | BASP1 | BASP1 Entrez,  Source | brain abundant, membrane attached signal protein 1 | 1050 | 0.118 | 0.5030 | Yes |
32 | TMEM176B | TMEM176B Entrez,  Source | transmembrane protein 176B | 1087 | 0.116 | 0.5068 | Yes |
33 | PTPRD | PTPRD Entrez,  Source | protein tyrosine phosphatase, receptor type, D | 1088 | 0.116 | 0.5134 | Yes |
34 | CYBRD1 | CYBRD1 Entrez,  Source | cytochrome b reductase 1 | 1178 | 0.111 | 0.5130 | Yes |
35 | ALDH1A1 | ALDH1A1 Entrez,  Source | aldehyde dehydrogenase 1 family, member A1 | 1183 | 0.110 | 0.5189 | Yes |
36 | HNMT | HNMT Entrez,  Source | histamine N-methyltransferase | 1378 | 0.100 | 0.5099 | Yes |
37 | COL5A1 | COL5A1 Entrez,  Source | collagen, type V, alpha 1 | 1404 | 0.098 | 0.5136 | Yes |
38 | GSTM3 | GSTM3 Entrez,  Source | glutathione S-transferase M3 (brain) | 1419 | 0.097 | 0.5181 | Yes |
39 | EDG2 | EDG2 Entrez,  Source | endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2 | 1468 | 0.095 | 0.5199 | Yes |
40 | PLA2G2A | PLA2G2A Entrez,  Source | phospholipase A2, group IIA (platelets, synovial fluid) | 1578 | 0.090 | 0.5168 | No |
41 | APOD | APOD Entrez,  Source | apolipoprotein D | 1653 | 0.087 | 0.5161 | No |
42 | ACOX2 | ACOX2 Entrez,  Source | acyl-Coenzyme A oxidase 2, branched chain | 1711 | 0.084 | 0.5166 | No |
43 | CEBPB | CEBPB Entrez,  Source | CCAAT/enhancer binding protein (C/EBP), beta | 1774 | 0.082 | 0.5165 | No |
44 | OSR2 | OSR2 Entrez,  Source | odd-skipped related 2 (Drosophila) | 1901 | 0.077 | 0.5113 | No |
45 | LTBP2 | LTBP2 Entrez,  Source | latent transforming growth factor beta binding protein 2 | 1980 | 0.074 | 0.5096 | No |
46 | MFAP4 | MFAP4 Entrez,  Source | microfibrillar-associated protein 4 | 2115 | 0.069 | 0.5034 | No |
47 | PDE4DIP | PDE4DIP Entrez,  Source | phosphodiesterase 4D interacting protein (myomegalin) | 2158 | 0.068 | 0.5041 | No |
48 | NOVA1 | NOVA1 Entrez,  Source | neuro-oncological ventral antigen 1 | 2178 | 0.068 | 0.5065 | No |
49 | SERPINA5 | SERPINA5 Entrez,  Source | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 | 2306 | 0.064 | 0.5006 | No |
50 | APOE | APOE Entrez,  Source | apolipoprotein E | 2345 | 0.063 | 0.5013 | No |
51 | CHRDL1 | CHRDL1 Entrez,  Source | chordin-like 1 | 2416 | 0.062 | 0.4995 | No |
52 | GPC3 | GPC3 Entrez,  Source | glypican 3 | 2514 | 0.059 | 0.4956 | No |
53 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 2553 | 0.058 | 0.4960 | No |
54 | CRABP2 | CRABP2 Entrez,  Source | cellular retinoic acid binding protein 2 | 2566 | 0.058 | 0.4984 | No |
55 | SLIT2 | SLIT2 Entrez,  Source | slit homolog 2 (Drosophila) | 2885 | 0.051 | 0.4772 | No |
56 | WISP2 | WISP2 Entrez,  Source | WNT1 inducible signaling pathway protein 2 | 2901 | 0.051 | 0.4790 | No |
57 | CDH11 | CDH11 Entrez,  Source | cadherin 11, type 2, OB-cadherin (osteoblast) | 2961 | 0.050 | 0.4773 | No |
58 | GAS7 | GAS7 Entrez,  Source | growth arrest-specific 7 | 3024 | 0.048 | 0.4754 | No |
59 | DCN | DCN Entrez,  Source | decorin | 3029 | 0.048 | 0.4778 | No |
60 | CD44 | CD44 Entrez,  Source | CD44 molecule (Indian blood group) | 3143 | 0.046 | 0.4718 | No |
61 | TIMP1 | TIMP1 Entrez,  Source | TIMP metallopeptidase inhibitor 1 | 3256 | 0.044 | 0.4658 | No |
62 | KCND2 | KCND2 Entrez,  Source | potassium voltage-gated channel, Shal-related subfamily, member 2 | 3272 | 0.043 | 0.4671 | No |
63 | GSTM5 | GSTM5 Entrez,  Source | glutathione S-transferase M5 | 3342 | 0.042 | 0.4643 | No |
64 | DZIP1 | DZIP1 Entrez,  Source | DAZ interacting protein 1 | 3642 | 0.036 | 0.4437 | No |
65 | HTRA1 | HTRA1 Entrez,  Source | HtrA serine peptidase 1 | 3790 | 0.034 | 0.4344 | No |
66 | DCX | DCX Entrez,  Source | doublecortex; lissencephaly, X-linked (doublecortin) | 3837 | 0.033 | 0.4328 | No |
67 | PTGFR | PTGFR Entrez,  Source | prostaglandin F receptor (FP) | 3885 | 0.032 | 0.4311 | No |
68 | GFPT2 | GFPT2 Entrez,  Source | glutamine-fructose-6-phosphate transaminase 2 | 3912 | 0.032 | 0.4309 | No |
69 | MMP2 | MMP2 Entrez,  Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 3978 | 0.031 | 0.4277 | No |
70 | FXYD1 | FXYD1 Entrez,  Source | FXYD domain containing ion transport regulator 1 (phospholemman) | 4378 | 0.024 | 0.3989 | No |
71 | INHBA | INHBA Entrez,  Source | inhibin, beta A (activin A, activin AB alpha polypeptide) | 4596 | 0.021 | 0.3836 | No |
72 | LUM | LUM Entrez,  Source | lumican | 4728 | 0.019 | 0.3748 | No |
73 | FIGF | FIGF Entrez,  Source | c-fos induced growth factor (vascular endothelial growth factor D) | 4855 | 0.017 | 0.3662 | No |
74 | MYH11 | MYH11 Entrez,  Source | myosin, heavy chain 11, smooth muscle | 4899 | 0.017 | 0.3639 | No |
75 | COL16A1 | COL16A1 Entrez,  Source | collagen, type XVI, alpha 1 | 5051 | 0.015 | 0.3533 | No |
76 | LSP1 | LSP1 Entrez,  Source | lymphocyte-specific protein 1 | 5115 | 0.014 | 0.3493 | No |
77 | PRRX1 | PRRX1 Entrez,  Source | paired related homeobox 1 | 5189 | 0.013 | 0.3445 | No |
78 | CTSK | CTSK Entrez,  Source | cathepsin K (pycnodysostosis) | 5416 | 0.010 | 0.3279 | No |
79 | CUGBP2 | CUGBP2 Entrez,  Source | CUG triplet repeat, RNA binding protein 2 | 5461 | 0.009 | 0.3251 | No |
80 | CAPN6 | CAPN6 Entrez,  Source | calpain 6 | 5480 | 0.009 | 0.3242 | No |
81 | SFRP4 | SFRP4 Entrez,  Source | secreted frizzled-related protein 4 | 5484 | 0.009 | 0.3245 | No |
82 | BMPR1A | BMPR1A Entrez,  Source | bone morphogenetic protein receptor, type IA | 5641 | 0.006 | 0.3130 | No |
83 | AXL | AXL Entrez,  Source | AXL receptor tyrosine kinase | 5649 | 0.006 | 0.3128 | No |
84 | TMED3 | TMED3 Entrez,  Source | transmembrane emp24 protein transport domain containing 3 | 5797 | 0.005 | 0.3020 | No |
85 | FGF7 | FGF7 Entrez,  Source | fibroblast growth factor 7 (keratinocyte growth factor) | 5875 | 0.004 | 0.2963 | No |
86 | MYOC | MYOC Entrez,  Source | myocilin, trabecular meshwork inducible glucocorticoid response | 5885 | 0.004 | 0.2958 | No |
87 | PCOLCE | PCOLCE Entrez,  Source | procollagen C-endopeptidase enhancer | 6215 | -0.001 | 0.2709 | No |
88 | CDKN2C | CDKN2C Entrez,  Source | cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4) | 6239 | -0.001 | 0.2693 | No |
89 | IGFBP6 | IGFBP6 Entrez,  Source | insulin-like growth factor binding protein 6 | 6428 | -0.004 | 0.2552 | No |
90 | SRPX | SRPX Entrez,  Source | sushi-repeat-containing protein, X-linked | 6552 | -0.005 | 0.2462 | No |
91 | SPON2 | SPON2 Entrez,  Source | spondin 2, extracellular matrix protein | 6569 | -0.005 | 0.2453 | No |
92 | PDLIM3 | PDLIM3 Entrez,  Source | PDZ and LIM domain 3 | 6654 | -0.006 | 0.2393 | No |
93 | CXCL14 | CXCL14 Entrez,  Source | chemokine (C-X-C motif) ligand 14 | 6682 | -0.007 | 0.2376 | No |
94 | LRRC17 | LRRC17 Entrez,  Source | leucine rich repeat containing 17 | 6786 | -0.008 | 0.2303 | No |
95 | PTGDS | PTGDS Entrez,  Source | prostaglandin D2 synthase 21kDa (brain) | 6790 | -0.008 | 0.2305 | No |
96 | FBLN5 | FBLN5 Entrez,  Source | fibulin 5 | 6975 | -0.010 | 0.2171 | No |
97 | NPY1R | NPY1R Entrez,  Source | neuropeptide Y receptor Y1 | 6976 | -0.010 | 0.2177 | No |
98 | SPOCK1 | SPOCK1 Entrez,  Source | sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 | 7173 | -0.013 | 0.2036 | No |
99 | DCAMKL1 | DCAMKL1 Entrez,  Source | doublecortin and CaM kinase-like 1 | 7197 | -0.013 | 0.2026 | No |
100 | NTRK2 | NTRK2 Entrez,  Source | neurotrophic tyrosine kinase, receptor, type 2 | 7314 | -0.014 | 0.1946 | No |
101 | PDGFRA | PDGFRA Entrez,  Source | platelet-derived growth factor receptor, alpha polypeptide | 7343 | -0.015 | 0.1933 | No |
102 | ASPA | ASPA Entrez,  Source | aspartoacylase (Canavan disease) | 7439 | -0.016 | 0.1870 | No |
103 | DDR2 | DDR2 Entrez,  Source | discoidin domain receptor family, member 2 | 7491 | -0.017 | 0.1841 | No |
104 | KCNK1 | KCNK1 Entrez,  Source | potassium channel, subfamily K, member 1 | 7542 | -0.017 | 0.1813 | No |
105 | SLIT3 | SLIT3 Entrez,  Source | slit homolog 3 (Drosophila) | 7586 | -0.018 | 0.1791 | No |
106 | MME | MME Entrez,  Source | membrane metallo-endopeptidase (neutral endopeptidase, enkephalinase) | 7620 | -0.018 | 0.1776 | No |
107 | IRS1 | IRS1 Entrez,  Source | insulin receptor substrate 1 | 8456 | -0.030 | 0.1160 | No |
108 | PDGFRL | PDGFRL Entrez,  Source | platelet-derived growth factor receptor-like | 8576 | -0.032 | 0.1088 | No |
109 | CFH | CFH Entrez,  Source | complement factor H | 8669 | -0.033 | 0.1037 | No |
110 | SERPINF1 | SERPINF1 Entrez,  Source | serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 | 8926 | -0.036 | 0.0864 | No |
111 | CD302 | CD302 Entrez,  Source | CD302 molecule | 8988 | -0.037 | 0.0839 | No |
112 | ANPEP | ANPEP Entrez,  Source | alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150) | 8993 | -0.037 | 0.0858 | No |
113 | PTGIS | PTGIS Entrez,  Source | prostaglandin I2 (prostacyclin) synthase | 9012 | -0.038 | 0.0865 | No |
114 | ROBO1 | ROBO1 Entrez,  Source | roundabout, axon guidance receptor, homolog 1 (Drosophila) | 9015 | -0.038 | 0.0885 | No |
115 | HSPB8 | HSPB8 Entrez,  Source | heat shock 22kDa protein 8 | 9051 | -0.038 | 0.0881 | No |
116 | ANGPT1 | ANGPT1 Entrez,  Source | angiopoietin 1 | 9136 | -0.039 | 0.0839 | No |
117 | THBS2 | THBS2 Entrez,  Source | thrombospondin 2 | 9270 | -0.041 | 0.0762 | No |
118 | RNASE4 | RNASE4 Entrez,  Source | ribonuclease, RNase A family, 4 | 9382 | -0.043 | 0.0703 | No |
119 | ATP1A2 | ATP1A2 Entrez,  Source | ATPase, Na+/K+ transporting, alpha 2 (+) polypeptide | 9475 | -0.045 | 0.0658 | No |
120 | MAFB | MAFB Entrez,  Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian) | 9601 | -0.047 | 0.0590 | No |
121 | FMOD | FMOD Entrez,  Source | fibromodulin | 9724 | -0.049 | 0.0526 | No |
122 | COLEC12 | COLEC12 Entrez,  Source | collectin sub-family member 12 | 9996 | -0.053 | 0.0351 | No |
123 | IGF1 | IGF1 Entrez,  Source | insulin-like growth factor 1 (somatomedin C) | 10373 | -0.060 | 0.0100 | No |
124 | CSPG2 | CSPG2 Entrez,  Source | chondroitin sulfate proteoglycan 2 (versican) | 10417 | -0.061 | 0.0102 | No |
125 | GRIA3 | GRIA3 Entrez,  Source | glutamate receptor, ionotrophic, AMPA 3 | 10426 | -0.061 | 0.0130 | No |
126 | WNT5A | WNT5A Entrez,  Source | wingless-type MMTV integration site family, member 5A | 10507 | -0.062 | 0.0105 | No |
127 | LRP1 | LRP1 Entrez,  Source | low density lipoprotein-related protein 1 (alpha-2-macroglobulin receptor) | 10559 | -0.063 | 0.0103 | No |
128 | NET1 | NET1 Entrez,  Source | neuroepithelial cell transforming gene 1 | 10614 | -0.065 | 0.0098 | No |
129 | PLN | PLN Entrez,  Source | phospholamban | 10671 | -0.066 | 0.0093 | No |
130 | GDF10 | GDF10 Entrez,  Source | growth differentiation factor 10 | 10910 | -0.071 | -0.0047 | No |
131 | PDGFD | PDGFD Entrez,  Source | platelet derived growth factor D | 10958 | -0.072 | -0.0041 | No |
132 | SLC22A3 | SLC22A3 Entrez,  Source | solute carrier family 22 (extraneuronal monoamine transporter), member 3 | 11185 | -0.078 | -0.0168 | No |
133 | EGFR | EGFR Entrez,  Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 11286 | -0.081 | -0.0198 | No |
134 | NT5E | NT5E Entrez,  Source | 5'-nucleotidase, ecto (CD73) | 11299 | -0.081 | -0.0160 | No |
135 | SHOX2 | SHOX2 Entrez,  Source | short stature homeobox 2 | 11349 | -0.083 | -0.0150 | No |
136 | SDC2 | SDC2 Entrez,  Source | syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan) | 11419 | -0.084 | -0.0154 | No |
137 | CFB | CFB Entrez,  Source | complement factor B | 11731 | -0.093 | -0.0337 | No |
138 | MBP | MBP Entrez,  Source | myelin basic protein | 11862 | -0.098 | -0.0380 | No |
139 | EFEMP1 | EFEMP1 Entrez,  Source | EGF-containing fibulin-like extracellular matrix protein 1 | 12182 | -0.111 | -0.0559 | No |
140 | F10 | F10 Entrez,  Source | coagulation factor X | 12278 | -0.115 | -0.0565 | No |
141 | C1ORF24 | C1ORF24 Entrez,  Source | chromosome 1 open reading frame 24 | 12389 | -0.121 | -0.0580 | No |
142 | OGT | OGT Entrez,  Source | O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) | 12390 | -0.121 | -0.0511 | No |
143 | SOX9 | SOX9 Entrez,  Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 12395 | -0.121 | -0.0445 | No |
144 | GPNMB | GPNMB Entrez,  Source | glycoprotein (transmembrane) nmb | 12406 | -0.122 | -0.0383 | No |
145 | CDO1 | CDO1 Entrez,  Source | cysteine dioxygenase, type I | 12594 | -0.134 | -0.0449 | No |
146 | FAP | FAP Entrez,  Source | fibroblast activation protein, alpha | 12774 | -0.149 | -0.0499 | No |
147 | UGDH | UGDH Entrez,  Source | UDP-glucose dehydrogenase | 12882 | -0.162 | -0.0488 | No |
148 | CXCL12 | CXCL12 Entrez,  Source | chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) | 12892 | -0.163 | -0.0401 | No |
149 | C6 | C6 Entrez,  Source | complement component 6 | 12932 | -0.169 | -0.0334 | No |
150 | NOTCH2 | NOTCH2 Entrez,  Source | Notch homolog 2 (Drosophila) | 13133 | -0.220 | -0.0361 | No |
151 | AOX1 | AOX1 Entrez,  Source | aldehyde oxidase 1 | 13183 | -0.242 | -0.0260 | No |
152 | FMO1 | FMO1 Entrez,  Source | flavin containing monooxygenase 1 | 13185 | -0.244 | -0.0121 | No |
153 | CES1 | CES1 Entrez,  Source | carboxylesterase 1 (monocyte/macrophage serine esterase 1) | 13305 | -0.420 | 0.0028 | No |