Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetCMV_HCMV_TIMECOURSE_24HRS_DN
Enrichment Score (ES)0.61177915
Normalized Enrichment Score (NES)1.7652357
Nominal p-value0.0018691589
FDR q-value0.03753036
FWER p-Value0.996
Table: GSEA Results Summary



Fig 1: Enrichment plot: CMV_HCMV_TIMECOURSE_24HRS_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ANXA1ANXA1
Entrez,  Source
annexin A1100.8150.2151Yes
2SERPINE1SERPINE1
Entrez,  Source
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1120.8030.4275Yes
3F2RF2R
Entrez,  Source
coagulation factor II (thrombin) receptor890.4560.5423Yes
4MGLLMGLL
Entrez,  Source
monoglyceride lipase4540.1950.5665Yes
5VEGFCVEGFC
Entrez,  Source
vascular endothelial growth factor C4960.1830.6118Yes
6SEMA3ASEMA3A
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A11980.1090.5881No
7PKIGPKIG
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor gamma15330.0920.5874No
8ANXA2ANXA2
Entrez,  Source
annexin A218250.0790.5865No
9GREM1GREM1
Entrez,  Source
gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis)25420.0590.5483No
10DNASE1L1DNASE1L1
Entrez,  Source
deoxyribonuclease I-like 128010.0530.5428No
11SLIT2SLIT2
Entrez,  Source
slit homolog 2 (Drosophila)28850.0510.5501No
12GSTA4GSTA4
Entrez,  Source
glutathione S-transferase A439970.0300.4747No
13TMEM158TMEM158
Entrez,  Source
transmembrane protein 15840320.0300.4800No
14ACO1ACO1
Entrez,  Source
aconitase 1, soluble49010.0170.4192No
15DLC1DLC1
Entrez,  Source
deleted in liver cancer 151380.0130.4050No
16AXLAXL
Entrez,  Source
AXL receptor tyrosine kinase56490.0060.3684No
17ATXN10ATXN10
Entrez,  Source
ataxin 1060350.0020.3399No
18CASP1CASP1
Entrez,  Source
caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)7177-0.0130.2576No
19PDGFRAPDGFRA
Entrez,  Source
platelet-derived growth factor receptor, alpha polypeptide7343-0.0150.2491No
20UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase7435-0.0160.2464No
21VAMP5VAMP5
Entrez,  Source
vesicle-associated membrane protein 5 (myobrevin)7502-0.0170.2459No
22FAHFAH
Entrez,  Source
fumarylacetoacetate hydrolase (fumarylacetoacetase)7545-0.0170.2473No
23ADD3ADD3
Entrez,  Source
adducin 3 (gamma)7901-0.0220.2264No
24ANPEPANPEP
Entrez,  Source
alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)8993-0.0370.1544No
25THBS2THBS2
Entrez,  Source
thrombospondin 29270-0.0410.1445No
26TPD52L2TPD52L2
Entrez,  Source
tumor protein D52-like 29479-0.0450.1408No
27FHL2FHL2
Entrez,  Source
four and a half LIM domains 29790-0.0500.1307No
28GNG11GNG11
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 119846-0.0510.1401No
29WNT5AWNT5A
Entrez,  Source
wingless-type MMTV integration site family, member 5A10507-0.0620.1070No
30ALDH7A1ALDH7A1
Entrez,  Source
aldehyde dehydrogenase 7 family, member A110886-0.0700.0972No
31CYP1B1CYP1B1
Entrez,  Source
cytochrome P450, family 1, subfamily B, polypeptide 110964-0.0730.1107No
32FASFAS
Entrez,  Source
Fas (TNF receptor superfamily, member 6)13202-0.2570.0105No
Table: GSEA details [plain text format]



Fig 2: CMV_HCMV_TIMECOURSE_24HRS_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CMV_HCMV_TIMECOURSE_24HRS_DN: Random ES distribution   
Gene set null distribution of ES for CMV_HCMV_TIMECOURSE_24HRS_DN