Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetCMV_HCMV_TIMECOURSE_ALL_DN
Enrichment Score (ES)0.47783297
Normalized Enrichment Score (NES)1.9200209
Nominal p-value0.0
FDR q-value0.012846943
FWER p-Value0.52
Table: GSEA Results Summary



Fig 1: Enrichment plot: CMV_HCMV_TIMECOURSE_ALL_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ANXA1ANXA1
Entrez,  Source
annexin A1100.8150.0325Yes
2SERPINE1SERPINE1
Entrez,  Source
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1120.8030.0651Yes
3COL3A1COL3A1
Entrez,  Source
collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)150.7370.0950Yes
4CTGFCTGF
Entrez,  Source
connective tissue growth factor320.6600.1206Yes
5ADMADM
Entrez,  Source
adrenomedullin340.6490.1470Yes
6EMP1EMP1
Entrez,  Source
epithelial membrane protein 1440.6060.1710Yes
7GPRC5AGPRC5A
Entrez,  Source
G protein-coupled receptor, family C, group 5, member A490.5870.1946Yes
8CCL2CCL2
Entrez,  Source
chemokine (C-C motif) ligand 2760.4770.2120Yes
9F2RF2R
Entrez,  Source
coagulation factor II (thrombin) receptor890.4560.2297Yes
10CDH13CDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)1280.3910.2427Yes
11CITED2CITED2
Entrez,  Source
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 21450.3670.2564Yes
12SERPINH1SERPINH1
Entrez,  Source
serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)1810.3360.2674Yes
13SLC22A4SLC22A4
Entrez,  Source
solute carrier family 22 (organic cation transporter), member 41820.3350.2810Yes
14HSPA4HSPA4
Entrez,  Source
heat shock 70kDa protein 41920.3280.2937Yes
15GJA1GJA1
Entrez,  Source
gap junction protein, alpha 1, 43kDa (connexin 43)1960.3240.3067Yes
16RGS4RGS4
Entrez,  Source
regulator of G-protein signalling 42190.3080.3175Yes
17LPXNLPXN
Entrez,  Source
leupaxin3170.2400.3199Yes
18SGKSGK
Entrez,  Source
serum/glucocorticoid regulated kinase3300.2370.3287Yes
19CDC42EP2CDC42EP2
Entrez,  Source
CDC42 effector protein (Rho GTPase binding) 23430.2330.3372Yes
20RND3RND3
Entrez,  Source
Rho family GTPase 33500.2300.3461Yes
21KLF6KLF6
Entrez,  Source
Kruppel-like factor 63640.2250.3543Yes
22LTBP1LTBP1
Entrez,  Source
latent transforming growth factor beta binding protein 13720.2190.3627Yes
23F3F3
Entrez,  Source
coagulation factor III (thromboplastin, tissue factor)4180.2050.3676Yes
24MGLLMGLL
Entrez,  Source
monoglyceride lipase4540.1950.3729Yes
25NR1D2NR1D2
Entrez,  Source
nuclear receptor subfamily 1, group D, member 24690.1900.3795Yes
26ADORA2BADORA2B
Entrez,  Source
adenosine A2b receptor4820.1860.3862Yes
27VEGFCVEGFC
Entrez,  Source
vascular endothelial growth factor C4960.1830.3926Yes
28ACAA2ACAA2
Entrez,  Source
acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)5280.1770.3975Yes
29ADFPADFP
Entrez,  Source
adipose differentiation-related protein5500.1720.4029Yes
30CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 615590.1710.4092Yes
31IGF2BP3IGF2BP3
Entrez,  Source
insulin-like growth factor 2 mRNA binding protein 35610.1710.4161Yes
32TGFBR3TGFBR3
Entrez,  Source
transforming growth factor, beta receptor III (betaglycan, 300kDa)5770.1680.4218Yes
33TGIFTGIF
Entrez,  Source
TGFB-induced factor (TALE family homeobox)6180.1620.4254Yes
34FABP3FABP3
Entrez,  Source
fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)6660.1550.4281Yes
35RUFY3RUFY3
Entrez,  Source
RUN and FYVE domain containing 36930.1510.4323Yes
36MUC4MUC4
Entrez,  Source
mucin 4, cell surface associated6950.1510.4383Yes
37PHLDA1PHLDA1
Entrez,  Source
pleckstrin homology-like domain, family A, member 17720.1430.4383Yes
38GCNT1GCNT1
Entrez,  Source
glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase)8000.1400.4420Yes
39NR2F2NR2F2
Entrez,  Source
nuclear receptor subfamily 2, group F, member 28060.1390.4473Yes
40TGFB1I1TGFB1I1
Entrez,  Source
transforming growth factor beta 1 induced transcript 19190.1270.4439Yes
41ACSL3ACSL3
Entrez,  Source
acyl-CoA synthetase long-chain family member 39300.1260.4483Yes
42TWIST1TWIST1
Entrez,  Source
twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila)9780.1230.4497Yes
43GZMKGZMK
Entrez,  Source
granzyme K (granzyme 3; tryptase II)9890.1230.4540Yes
44WEE1WEE1
Entrez,  Source
WEE1 homolog (S. pombe)10010.1210.4581Yes
45LYSTLYST
Entrez,  Source
lysosomal trafficking regulator11250.1130.4533Yes
46LOXL1LOXL1
Entrez,  Source
lysyl oxidase-like 111370.1130.4571Yes
47BDKRB2BDKRB2
Entrez,  Source
bradykinin receptor B211730.1110.4589Yes
48SEMA3ASEMA3A
Entrez,  Source
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A11980.1090.4615Yes
49ZFP36L2ZFP36L2
Entrez,  Source
zinc finger protein 36, C3H type-like 212060.1090.4654Yes
50DUSP2DUSP2
Entrez,  Source
dual specificity phosphatase 212080.1090.4698Yes
51SYNE1SYNE1
Entrez,  Source
spectrin repeat containing, nuclear envelope 112960.1040.4674Yes
52DUSP1DUSP1
Entrez,  Source
dual specificity phosphatase 112970.1040.4717Yes
53MYO1BMYO1B
Entrez,  Source
myosin IB13110.1040.4749Yes
54RRAS2RRAS2
Entrez,  Source
related RAS viral (r-ras) oncogene homolog 213990.0990.4723Yes
55CDH6CDH6
Entrez,  Source
cadherin 6, type 2, K-cadherin (fetal kidney)14050.0980.4759Yes
56HMGA2HMGA2
Entrez,  Source
high mobility group AT-hook 214650.0960.4753Yes
57AGGF1AGGF1
Entrez,  Source
angiogenic factor with G patch and FHA domains 115070.0940.4760Yes
58PKIGPKIG
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor gamma15330.0920.4778Yes
59CHN1CHN1
Entrez,  Source
chimerin (chimaerin) 116270.0880.4743No
60TLE4TLE4
Entrez,  Source
transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)16720.0860.4745No
61CDKN1BCDKN1B
Entrez,  Source
cyclin-dependent kinase inhibitor 1B (p27, Kip1)16760.0860.4777No
62ANXA2ANXA2
Entrez,  Source
annexin A218250.0790.4697No
63TRIM2TRIM2
Entrez,  Source
tripartite motif-containing 218710.0780.4694No
64OSR2OSR2
Entrez,  Source
odd-skipped related 2 (Drosophila)19010.0770.4703No
65SCN8ASCN8A
Entrez,  Source
sodium channel, voltage gated, type VIII, alpha19200.0760.4720No
66STC2STC2
Entrez,  Source
stanniocalcin 220090.0730.4683No
67FZD2FZD2
Entrez,  Source
frizzled homolog 2 (Drosophila)20190.0730.4705No
68DUSP4DUSP4
Entrez,  Source
dual specificity phosphatase 421620.0680.4625No
69VAPBVAPB
Entrez,  Source
VAMP (vesicle-associated membrane protein)-associated protein B and C22320.0660.4599No
70ATXN1ATXN1
Entrez,  Source
ataxin 122540.0660.4610No
71ANP32AANP32A
Entrez,  Source
acidic (leucine-rich) nuclear phosphoprotein 32 family, member A22790.0650.4618No
72PRKAB1PRKAB1
Entrez,  Source
protein kinase, AMP-activated, beta 1 non-catalytic subunit25020.0600.4473No
73GREM1GREM1
Entrez,  Source
gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis)25420.0590.4467No
74GTF2E1GTF2E1
Entrez,  Source
general transcription factor IIE, polypeptide 1, alpha 56kDa25550.0580.4482No
75SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1525850.0580.4483No
76SLC12A1SLC12A1
Entrez,  Source
solute carrier family 12 (sodium/potassium/chloride transporters), member 127600.0540.4372No
77DNASE1L1DNASE1L1
Entrez,  Source
deoxyribonuclease I-like 128010.0530.4363No
78CXCR7CXCR7
Entrez,  Source
chemokine (C-X-C motif) receptor 728220.0520.4369No
79SMAD6SMAD6
Entrez,  Source
SMAD, mothers against DPP homolog 6 (Drosophila)28420.0520.4376No
80NIT1NIT1
Entrez,  Source
nitrilase 128590.0520.4385No
81SLIT2SLIT2
Entrez,  Source
slit homolog 2 (Drosophila)28850.0510.4387No
82ALDH3B1ALDH3B1
Entrez,  Source
aldehyde dehydrogenase 3 family, member B129190.0500.4382No
83RAD17RAD17
Entrez,  Source
RAD17 homolog (S. pombe)29910.0490.4348No
84SIPA1L1SIPA1L1
Entrez,  Source
signal-induced proliferation-associated 1 like 130040.0480.4358No
85CDC25BCDC25B
Entrez,  Source
cell division cycle 25B30660.0470.4331No
86PPAP2BPPAP2B
Entrez,  Source
phosphatidic acid phosphatase type 2B32670.0430.4196No
87NRP1NRP1
Entrez,  Source
neuropilin 133040.0420.4186No
88AKT3AKT3
Entrez,  Source
v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)34490.0400.4092No
89PMP22PMP22
Entrez,  Source
peripheral myelin protein 2234640.0390.4097No
90TRIOTRIO
Entrez,  Source
triple functional domain (PTPRF interacting)34910.0390.4093No
91UBL3UBL3
Entrez,  Source
ubiquitin-like 335090.0380.4096No
92KIAA0101KIAA0101
Entrez,  Source
KIAA010135930.0370.4048No
93ARNT2ARNT2
Entrez,  Source
aryl-hydrocarbon receptor nuclear translocator 237020.0350.3980No
94ACOX1ACOX1
Entrez,  Source
acyl-Coenzyme A oxidase 1, palmitoyl37080.0350.3990No
95MMP3MMP3
Entrez,  Source
matrix metallopeptidase 3 (stromelysin 1, progelatinase)37640.0340.3962No
96CBR4CBR4
Entrez,  Source
carbonyl reductase 438450.0330.3914No
97PTGFRPTGFR
Entrez,  Source
prostaglandin F receptor (FP)38850.0320.3898No
98GSTA4GSTA4
Entrez,  Source
glutathione S-transferase A439970.0300.3825No
99TMEM158TMEM158
Entrez,  Source
transmembrane protein 15840320.0300.3812No
100ITPKAITPKA
Entrez,  Source
inositol 1,4,5-trisphosphate 3-kinase A40530.0290.3808No
101ORC4LORC4L
Entrez,  Source
origin recognition complex, subunit 4-like (yeast)40800.0290.3800No
102LRRC15LRRC15
Entrez,  Source
leucine rich repeat containing 1543140.0250.3633No
103GRM5GRM5
Entrez,  Source
glutamate receptor, metabotropic 543890.0240.3586No
104TSPAN5TSPAN5
Entrez,  Source
tetraspanin 543920.0240.3594No
105MNAT1MNAT1
Entrez,  Source
menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)45560.0220.3479No
106ACO1ACO1
Entrez,  Source
aconitase 1, soluble49010.0170.3223No
107NMT2NMT2
Entrez,  Source
N-myristoyltransferase 249170.0160.3219No
108YTHDC1YTHDC1
Entrez,  Source
YTH domain containing 150810.0140.3100No
109DLC1DLC1
Entrez,  Source
deleted in liver cancer 151380.0130.3063No
110CHEK2CHEK2
Entrez,  Source
CHK2 checkpoint homolog (S. pombe)51390.0130.3068No
111CEBPDCEBPD
Entrez,  Source
CCAAT/enhancer binding protein (C/EBP), delta52680.0120.2975No
112MIPEPMIPEP
Entrez,  Source
mitochondrial intermediate peptidase54040.0100.2876No
113SLC24A1SLC24A1
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 154230.0090.2866No
114CACNA1ECACNA1E
Entrez,  Source
calcium channel, voltage-dependent, alpha 1E subunit54410.0090.2857No
115INPP4BINPP4B
Entrez,  Source
inositol polyphosphate-4-phosphatase, type II, 105kDa54690.0090.2840No
116PPP2R1BPPP2R1B
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit A (PR 65), beta isoform54700.0090.2844No
117MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 655050.0080.2821No
118FGF2FGF2
Entrez,  Source
fibroblast growth factor 2 (basic)55270.0080.2808No
119AXLAXL
Entrez,  Source
AXL receptor tyrosine kinase56490.0060.2719No
120OPRK1OPRK1
Entrez,  Source
opioid receptor, kappa 157330.0050.2657No
121PEX11BPEX11B
Entrez,  Source
peroxisomal biogenesis factor 11B57780.0050.2626No
122GADD45AGADD45A
Entrez,  Source
growth arrest and DNA-damage-inducible, alpha57880.0050.2621No
123HNRPDLHNRPDL
Entrez,  Source
heterogeneous nuclear ribonucleoprotein D-like58300.0040.2591No
124FGF7FGF7
Entrez,  Source
fibroblast growth factor 7 (keratinocyte growth factor)58750.0040.2559No
125TPM1TPM1
Entrez,  Source
tropomyosin 1 (alpha)59260.0030.2522No
126ATXN10ATXN10
Entrez,  Source
ataxin 1060350.0020.2441No
127ICKICK
Entrez,  Source
intestinal cell (MAK-like) kinase60390.0020.2439No
128MALLMALL
Entrez,  Source
mal, T-cell differentiation protein-like6400-0.0030.2166No
129GAS6GAS6
Entrez,  Source
growth arrest-specific 66432-0.0040.2144No
130APEX1APEX1
Entrez,  Source
APEX nuclease (multifunctional DNA repair enzyme) 16464-0.0040.2121No
131LRRC17LRRC17
Entrez,  Source
leucine rich repeat containing 176786-0.0080.1880No
132TCF21TCF21
Entrez,  Source
transcription factor 216846-0.0090.1838No
133CASP1CASP1
Entrez,  Source
caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)7177-0.0130.1592No
134DCAMKL1DCAMKL1
Entrez,  Source
doublecortin and CaM kinase-like 17197-0.0130.1583No
135CIRBPCIRBP
Entrez,  Source
cold inducible RNA binding protein7213-0.0130.1577No
136LAPTM5LAPTM5
Entrez,  Source
lysosomal associated multispanning membrane protein 57239-0.0140.1563No
137GNRH1GNRH1
Entrez,  Source
gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)7242-0.0140.1567No
138PDGFRAPDGFRA
Entrez,  Source
platelet-derived growth factor receptor, alpha polypeptide7343-0.0150.1497No
139ACPPACPP
Entrez,  Source
acid phosphatase, prostate7380-0.0150.1476No
140PHKA1PHKA1
Entrez,  Source
phosphorylase kinase, alpha 1 (muscle)7383-0.0150.1480No
141UGCGUGCG
Entrez,  Source
UDP-glucose ceramide glucosyltransferase7435-0.0160.1448No
142VAMP5VAMP5
Entrez,  Source
vesicle-associated membrane protein 5 (myobrevin)7502-0.0170.1404No
143FAHFAH
Entrez,  Source
fumarylacetoacetate hydrolase (fumarylacetoacetase)7545-0.0170.1379No
144CUBNCUBN
Entrez,  Source
cubilin (intrinsic factor-cobalamin receptor)7631-0.0190.1322No
145RAB3BRAB3B
Entrez,  Source
RAB3B, member RAS oncogene family7678-0.0190.1295No
146MYCMYC
Entrez,  Source
v-myc myelocytomatosis viral oncogene homolog (avian)7715-0.0200.1275No
147NTF3NTF3
Entrez,  Source
neurotrophin 37788-0.0210.1229No
148AHRAHR
Entrez,  Source
aryl hydrocarbon receptor7804-0.0210.1226No
149BHLHB2BHLHB2
Entrez,  Source
basic helix-loop-helix domain containing, class B, 27852-0.0210.1199No
150GPSM3GPSM3
Entrez,  Source
G-protein signalling modulator 3 (AGS3-like, C. elegans)7872-0.0220.1193No
151ADD3ADD3
Entrez,  Source
adducin 3 (gamma)7901-0.0220.1181No
152PIAS3PIAS3
Entrez,  Source
protein inhibitor of activated STAT, 37948-0.0230.1155No
153ETFBETFB
Entrez,  Source
electron-transfer-flavoprotein, beta polypeptide8173-0.0260.0995No
154INPP5BINPP5B
Entrez,  Source
inositol polyphosphate-5-phosphatase, 75kDa8227-0.0270.0965No
155SERPINB2SERPINB2
Entrez,  Source
serpin peptidase inhibitor, clade B (ovalbumin), member 28340-0.0280.0891No
156IRS1IRS1
Entrez,  Source
insulin receptor substrate 18456-0.0300.0816No
157VDRVDR
Entrez,  Source
vitamin D (1,25- dihydroxyvitamin D3) receptor8460-0.0300.0826No
158GJA4GJA4
Entrez,  Source
gap junction protein, alpha 4, 37kDa (connexin 37)8471-0.0310.0831No
159UMPSUMPS
Entrez,  Source
uridine monophosphate synthetase (orotate phosphoribosyl transferase and orotidine-5'-decarboxylase)8780-0.0350.0610No
160MGEA5MGEA5
Entrez,  Source
meningioma expressed antigen 5 (hyaluronidase)8871-0.0360.0556No
161SMAD3SMAD3
Entrez,  Source
SMAD, mothers against DPP homolog 3 (Drosophila)8872-0.0360.0570No
162SOCS1SOCS1
Entrez,  Source
suppressor of cytokine signaling 18877-0.0360.0582No
163DDTDDT
Entrez,  Source
D-dopachrome tautomerase8920-0.0360.0565No
164ANPEPANPEP
Entrez,  Source
alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)8993-0.0370.0525No
165PTGISPTGIS
Entrez,  Source
prostaglandin I2 (prostacyclin) synthase9012-0.0380.0527No
166FGF5FGF5
Entrez,  Source
fibroblast growth factor 59130-0.0390.0454No
167SKIV2LSKIV2L
Entrez,  Source
superkiller viralicidic activity 2-like (S. cerevisiae)9215-0.0400.0406No
168MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)9243-0.0410.0402No
169THBS2THBS2
Entrez,  Source
thrombospondin 29270-0.0410.0399No
170POLD2POLD2
Entrez,  Source
polymerase (DNA directed), delta 2, regulatory subunit 50kDa9276-0.0410.0412No
171MLLT11MLLT11
Entrez,  Source
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 119394-0.0430.0340No
172GLMNGLMN
Entrez,  Source
glomulin, FKBP associated protein9440-0.0440.0324No
173TPD52L2TPD52L2
Entrez,  Source
tumor protein D52-like 29479-0.0450.0313No
174ANGPTL2ANGPTL2
Entrez,  Source
angiopoietin-like 29536-0.0460.0289No
175PDE4BPDE4B
Entrez,  Source
phosphodiesterase 4B, cAMP-specific (phosphodiesterase E4 dunce homolog, Drosophila)9537-0.0460.0308No
176PCYT2PCYT2
Entrez,  Source
phosphate cytidylyltransferase 2, ethanolamine9674-0.0480.0224No
177RBM16RBM16
Entrez,  Source
RNA binding motif protein 169688-0.0480.0234No
178FHL2FHL2
Entrez,  Source
four and a half LIM domains 29790-0.0500.0177No
179GNG11GNG11
Entrez,  Source
guanine nucleotide binding protein (G protein), gamma 119846-0.0510.0156No
180ATP2A2ATP2A2
Entrez,  Source
ATPase, Ca++ transporting, cardiac muscle, slow twitch 29899-0.0520.0137No
181KIFC1KIFC1
Entrez,  Source
kinesin family member C110151-0.056-0.0031No
182MAGI2MAGI2
Entrez,  Source
membrane associated guanylate kinase, WW and PDZ domain containing 210184-0.056-0.0033No
183ARHGEF2ARHGEF2
Entrez,  Source
rho/rac guanine nucleotide exchange factor (GEF) 210190-0.057-0.0014No
184CSPG2CSPG2
Entrez,  Source
chondroitin sulfate proteoglycan 2 (versican)10417-0.061-0.0161No
185GRIA3GRIA3
Entrez,  Source
glutamate receptor, ionotrophic, AMPA 310426-0.061-0.0143No
186GBE1GBE1
Entrez,  Source
glucan (1,4-alpha-), branching enzyme 1 (glycogen branching enzyme, Andersen disease, glycogen storage disease type IV)10501-0.062-0.0174No
187WNT5AWNT5A
Entrez,  Source
wingless-type MMTV integration site family, member 5A10507-0.062-0.0152No
188PRKAB2PRKAB2
Entrez,  Source
protein kinase, AMP-activated, beta 2 non-catalytic subunit10625-0.065-0.0215No
189MPGMPG
Entrez,  Source
N-methylpurine-DNA glycosylase10650-0.065-0.0207No
190DDX17DDX17
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 1710688-0.066-0.0208No
191CITCIT
Entrez,  Source
citron (rho-interacting, serine/threonine kinase 21)10802-0.068-0.0266No
192PAFAH1B1PAFAH1B1
Entrez,  Source
platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa10816-0.069-0.0248No
193ALDH7A1ALDH7A1
Entrez,  Source
aldehyde dehydrogenase 7 family, member A110886-0.070-0.0272No
194PDCD4PDCD4
Entrez,  Source
programmed cell death 4 (neoplastic transformation inhibitor)10963-0.073-0.0301No
195CYP1B1CYP1B1
Entrez,  Source
cytochrome P450, family 1, subfamily B, polypeptide 110964-0.073-0.0271No
196PRIM2APRIM2A
Entrez,  Source
primase, polypeptide 2A, 58kDa10979-0.073-0.0252No
197RUNX1RUNX1
Entrez,  Source
runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene)11134-0.077-0.0338No
198SIX1SIX1
Entrez,  Source
sine oculis homeobox homolog 1 (Drosophila)11186-0.078-0.0346No
199THOC1THOC1
Entrez,  Source
THO complex 111265-0.080-0.0372No
200EGFREGFR
Entrez,  Source
epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)11286-0.081-0.0355No
201NT5ENT5E
Entrez,  Source
5'-nucleotidase, ecto (CD73)11299-0.081-0.0331No
202ISG20L2ISG20L2
Entrez,  Source
interferon stimulated exonuclease gene 20kDa-like 211415-0.084-0.0384No
203SDC2SDC2
Entrez,  Source
syndecan 2 (heparan sulfate proteoglycan 1, cell surface-associated, fibroglycan)11419-0.084-0.0352No
204SIP1SIP1
Entrez,  Source
survival of motor neuron protein interacting protein 111513-0.087-0.0388No
205NR1H3NR1H3
Entrez,  Source
nuclear receptor subfamily 1, group H, member 311607-0.089-0.0422No
206GCS1GCS1
Entrez,  Source
-11734-0.093-0.0480No
207CSTF1CSTF1
Entrez,  Source
cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa11951-0.101-0.0604No
208SIPA1SIPA1
Entrez,  Source
signal-induced proliferation-associated gene 112263-0.115-0.0794No
209PLEC1PLEC1
Entrez,  Source
plectin 1, intermediate filament binding protein 500kDa12297-0.116-0.0772No
210ODF2ODF2
Entrez,  Source
outer dense fiber of sperm tails 212313-0.117-0.0736No
211GSTO1GSTO1
Entrez,  Source
glutathione S-transferase omega 112328-0.117-0.0699No
212AURKAAURKA
Entrez,  Source
aurora kinase A12546-0.131-0.0811No
213ANKRD15ANKRD15
Entrez,  Source
ankyrin repeat domain 1512561-0.132-0.0768No
214RBM10RBM10
Entrez,  Source
RNA binding motif protein 1012571-0.133-0.0721No
215MGMTMGMT
Entrez,  Source
O-6-methylguanine-DNA methyltransferase12597-0.134-0.0685No
216SNUPNSNUPN
Entrez,  Source
snurportin 112641-0.137-0.0662No
217GABBR2GABBR2
Entrez,  Source
gamma-aminobutyric acid (GABA) B receptor, 212653-0.138-0.0614No
218MVDMVD
Entrez,  Source
mevalonate (diphospho) decarboxylase12678-0.140-0.0576No
219DDIT4DDIT4
Entrez,  Source
DNA-damage-inducible transcript 412743-0.146-0.0565No
220ZBTB1ZBTB1
Entrez,  Source
zinc finger and BTB domain containing 112766-0.148-0.0521No
221THPOTHPO
Entrez,  Source
thrombopoietin (myeloproliferative leukemia virus oncogene ligand, megakaryocyte growth and development factor)12787-0.151-0.0475No
222CXCL12CXCL12
Entrez,  Source
chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1)12892-0.163-0.0488No
223DHRS3DHRS3
Entrez,  Source
dehydrogenase/reductase (SDR family) member 312962-0.175-0.0469No
224KLF10KLF10
Entrez,  Source
Kruppel-like factor 1012966-0.175-0.0400No
225GSTT2GSTT2
Entrez,  Source
glutathione S-transferase theta 213018-0.189-0.0362No
226ID2ID2
Entrez,  Source
inhibitor of DNA binding 2, dominant negative helix-loop-helix protein13029-0.193-0.0291No
227TSPYL4TSPYL4
Entrez,  Source
TSPY-like 413090-0.207-0.0253No
228NOTCH2NOTCH2
Entrez,  Source
Notch homolog 2 (Drosophila)13133-0.220-0.0195No
229REV3LREV3L
Entrez,  Source
REV3-like, catalytic subunit of DNA polymerase zeta (yeast)13154-0.226-0.0119No
230FASFAS
Entrez,  Source
Fas (TNF receptor superfamily, member 6)13202-0.257-0.0050No
231PPP1R3CPPP1R3C
Entrez,  Source
protein phosphatase 1, regulatory (inhibitor) subunit 3C13293-0.3830.0037No
Table: GSEA details [plain text format]



Fig 2: CMV_HCMV_TIMECOURSE_ALL_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CMV_HCMV_TIMECOURSE_ALL_DN: Random ES distribution   
Gene set null distribution of ES for CMV_HCMV_TIMECOURSE_ALL_DN