Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | CROONQUIST_RAS_STROMA_DN |
| Enrichment Score (ES) | 0.86546856 |
| Normalized Enrichment Score (NES) | 2.1299148 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0016274063 |
| FWER p-Value | 0.02 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 3 | 1.046 | 0.2289 | Yes |
| 2 | IGFBP7 | IGFBP7 Entrez, Source | insulin-like growth factor binding protein 7 | 5 | 0.972 | 0.4418 | Yes |
| 3 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 32 | 0.660 | 0.5844 | Yes |
| 4 | FOS | FOS Entrez, Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 142 | 0.371 | 0.6574 | Yes |
| 5 | GJA1 | GJA1 Entrez, Source | gap junction protein, alpha 1, 43kDa (connexin 43) | 196 | 0.324 | 0.7244 | Yes |
| 6 | SPARC | SPARC Entrez, Source | secreted protein, acidic, cysteine-rich (osteonectin) | 234 | 0.297 | 0.7866 | Yes |
| 7 | TMSB4X | TMSB4X Entrez, Source | thymosin, beta 4, X-linked | 427 | 0.202 | 0.8164 | Yes |
| 8 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 567 | 0.170 | 0.8432 | Yes |
| 9 | NUPR1 | NUPR1 Entrez, Source | - | 1127 | 0.113 | 0.8261 | Yes |
| 10 | DUSP1 | DUSP1 Entrez, Source | dual specificity phosphatase 1 | 1297 | 0.104 | 0.8363 | Yes |
| 11 | ACTA2 | ACTA2 Entrez, Source | actin, alpha 2, smooth muscle, aorta | 1439 | 0.096 | 0.8468 | Yes |
| 12 | SULF1 | SULF1 Entrez, Source | sulfatase 1 | 1470 | 0.095 | 0.8655 | Yes |
| 13 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 4953 | 0.016 | 0.6076 | No |
| 14 | TGFBI | TGFBI Entrez, Source | transforming growth factor, beta-induced, 68kDa | 6410 | -0.003 | 0.4991 | No |
| 15 | CD81 | CD81 Entrez, Source | CD81 molecule | 6698 | -0.007 | 0.4791 | No |
| 16 | NR4A2 | NR4A2 Entrez, Source | nuclear receptor subfamily 4, group A, member 2 | 11567 | -0.088 | 0.1332 | No |
