Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | ECTODERM_DEVELOPMENT |
| Enrichment Score (ES) | 0.7061099 |
| Normalized Enrichment Score (NES) | 2.0888407 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0027724209 |
| FWER p-Value | 0.047 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | LAMC2 | LAMC2 Entrez, Source | laminin, gamma 2 | 14 | 0.770 | 0.1435 | Yes |
| 2 | COL5A2 | COL5A2 Entrez, Source | collagen, type V, alpha 2 | 28 | 0.668 | 0.2680 | Yes |
| 3 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 32 | 0.660 | 0.3916 | Yes |
| 4 | EMP1 | EMP1 Entrez, Source | epithelial membrane protein 1 | 44 | 0.606 | 0.5045 | Yes |
| 5 | FST | FST Entrez, Source | follistatin | 132 | 0.388 | 0.5708 | Yes |
| 6 | GJB5 | GJB5 Entrez, Source | gap junction protein, beta 5 (connexin 31.1) | 322 | 0.239 | 0.6014 | Yes |
| 7 | TGFB2 | TGFB2 Entrez, Source | transforming growth factor, beta 2 | 367 | 0.223 | 0.6400 | Yes |
| 8 | STS | STS Entrez, Source | steroid sulfatase (microsomal), arylsulfatase C, isozyme S | 436 | 0.199 | 0.6722 | Yes |
| 9 | BTD | BTD Entrez, Source | biotinidase | 670 | 0.155 | 0.6838 | Yes |
| 10 | COL1A1 | COL1A1 Entrez, Source | collagen, type I, alpha 1 | 738 | 0.146 | 0.7061 | Yes |
| 11 | PLOD1 | PLOD1 Entrez, Source | procollagen-lysine 1, 2-oxoglutarate 5-dioxygenase 1 | 1057 | 0.117 | 0.7042 | No |
| 12 | ALDH3A2 | ALDH3A2 Entrez, Source | aldehyde dehydrogenase 3 family, member A2 | 1352 | 0.101 | 0.7011 | No |
| 13 | CRABP2 | CRABP2 Entrez, Source | cellular retinoic acid binding protein 2 | 2566 | 0.058 | 0.6209 | No |
| 14 | ATP2C1 | ATP2C1 Entrez, Source | ATPase, Ca++ transporting, type 2C, member 1 | 3896 | 0.032 | 0.5270 | No |
| 15 | VAX2 | VAX2 Entrez, Source | ventral anterior homeobox 2 | 4278 | 0.026 | 0.5032 | No |
| 16 | PTHLH | PTHLH Entrez, Source | parathyroid hormone-like hormone | 4594 | 0.021 | 0.4835 | No |
| 17 | FLOT2 | FLOT2 Entrez, Source | flotillin 2 | 4869 | 0.017 | 0.4662 | No |
| 18 | ERCC3 | ERCC3 Entrez, Source | excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing) | 5284 | 0.011 | 0.4372 | No |
| 19 | DSP | DSP Entrez, Source | desmoplakin | 5452 | 0.009 | 0.4263 | No |
| 20 | FGF7 | FGF7 Entrez, Source | fibroblast growth factor 7 (keratinocyte growth factor) | 5875 | 0.004 | 0.3953 | No |
| 21 | LAMB3 | LAMB3 Entrez, Source | laminin, beta 3 | 6323 | -0.002 | 0.3621 | No |
| 22 | LAMA3 | LAMA3 Entrez, Source | laminin, alpha 3 | 6404 | -0.003 | 0.3567 | No |
| 23 | GLI1 | GLI1 Entrez, Source | glioma-associated oncogene homolog 1 (zinc finger protein) | 6483 | -0.004 | 0.3517 | No |
| 24 | UGCG | UGCG Entrez, Source | UDP-glucose ceramide glucosyltransferase | 7435 | -0.016 | 0.2832 | No |
| 25 | STX2 | STX2 Entrez, Source | syntaxin 2 | 8992 | -0.037 | 0.1733 | No |
| 26 | NME2 | NME2 Entrez, Source | non-metastatic cells 2, protein (NM23B) expressed in | 9131 | -0.039 | 0.1703 | No |
| 27 | ATP2A2 | ATP2A2 Entrez, Source | ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 | 9899 | -0.052 | 0.1224 | No |
| 28 | POU2F3 | POU2F3 Entrez, Source | POU domain, class 2, transcription factor 3 | 10351 | -0.059 | 0.0996 | No |
| 29 | RBP2 | RBP2 Entrez, Source | retinol binding protein 2, cellular | 10395 | -0.060 | 0.1077 | No |
| 30 | PPARD | PPARD Entrez, Source | peroxisome proliferative activated receptor, delta | 12520 | -0.130 | -0.0276 | No |
| 31 | DHCR24 | DHCR24 Entrez, Source | 24-dehydrocholesterol reductase | 12656 | -0.138 | -0.0119 | No |
| 32 | KLK7 | KLK7 Entrez, Source | kallikrein 7 (chymotryptic, stratum corneum) | 12860 | -0.160 | 0.0029 | No |
| 33 | FABP5 | FABP5 Entrez, Source | fatty acid binding protein 5 (psoriasis-associated) | 12975 | -0.177 | 0.0276 | No |
