Details for gene set EXTRACELLULAR

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	EXTRACELLULAR_MATRIX
Enrichment Score (ES)	0.6339906
Normalized Enrichment Score (NES)	2.047654
Nominal p-value	0.0018281536
FDR q-value	0.0034031216
FWER p-Value	0.092

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	COL1A2	COL1A2 Entrez, Source	collagen, type I, alpha 2	3	1.046	0.1278	Yes
2	COL3A1	COL3A1 Entrez, Source	collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant)	15	0.737	0.2172	Yes
3	COL5A2	COL5A2 Entrez, Source	collagen, type V, alpha 2	28	0.668	0.2981	Yes
4	CTGF	CTGF Entrez, Source	connective tissue growth factor	32	0.660	0.3786	Yes
5	MGP	MGP Entrez, Source	matrix Gla protein	62	0.533	0.4416	Yes
6	PRELP	PRELP Entrez, Source	proline/arginine-rich end leucine-rich repeat protein	119	0.401	0.4865	Yes
7	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	224	0.303	0.5158	Yes
8	LAMB2	LAMB2 Entrez, Source	laminin, beta 2 (laminin S)	351	0.229	0.5344	Yes
9	USH2A	USH2A Entrez, Source	Usher syndrome 2A (autosomal recessive, mild)	425	0.202	0.5536	Yes
10	FBN1	FBN1 Entrez, Source	fibrillin 1	483	0.185	0.5720	Yes
11	SGCE	SGCE Entrez, Source	sarcoglycan, epsilon	484	0.185	0.5947	Yes
12	ADAMTS5	ADAMTS5 Entrez, Source	ADAM metallopeptidase with thrombospondin type 1 motif, 5 (aggrecanase-2)	609	0.164	0.6054	Yes
13	COLQ	COLQ Entrez, Source	collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	718	0.149	0.6155	Yes
14	EFEMP2	EFEMP2 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 2	824	0.137	0.6243	Yes
15	DSPP	DSPP Entrez, Source	dentin sialophosphoprotein	1020	0.120	0.6243	Yes
16	SGCG	SGCG Entrez, Source	sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)	1085	0.116	0.6336	Yes
17	COL4A4	COL4A4 Entrez, Source	collagen, type IV, alpha 4	1373	0.100	0.6242	Yes
18	COL5A1	COL5A1 Entrez, Source	collagen, type V, alpha 1	1404	0.098	0.6340	Yes
19	IMPG1	IMPG1 Entrez, Source	interphotoreceptor matrix proteoglycan 1	1697	0.085	0.6224	No
20	FBLN2	FBLN2 Entrez, Source	fibulin 2	1714	0.084	0.6315	No
21	NID2	NID2 Entrez, Source	nidogen 2 (osteonidogen)	1925	0.075	0.6249	No
22	LTBP2	LTBP2 Entrez, Source	latent transforming growth factor beta binding protein 2	1980	0.074	0.6299	No
23	TGFB1	TGFB1 Entrez, Source	transforming growth factor, beta 1 (Camurati-Engelmann disease)	2079	0.071	0.6311	No
24	DMP1	DMP1 Entrez, Source	dentin matrix acidic phosphoprotein	2433	0.061	0.6121	No
25	COL11A1	COL11A1 Entrez, Source	collagen, type XI, alpha 1	2472	0.060	0.6166	No
26	THBS4	THBS4 Entrez, Source	thrombospondin 4	2746	0.054	0.6026	No
27	ECM1	ECM1 Entrez, Source	extracellular matrix protein 1	2924	0.050	0.5955	No
28	COL18A1	COL18A1 Entrez, Source	collagen, type XVIII, alpha 1	3249	0.044	0.5764	No
29	SPG7	SPG7 Entrez, Source	spastic paraplegia 7, paraplegin (pure and complicated autosomal recessive)	3302	0.043	0.5777	No
30	TINAG	TINAG Entrez, Source	tubulointerstitial nephritis antigen	3422	0.040	0.5737	No
31	IMPG2	IMPG2 Entrez, Source	interphotoreceptor matrix proteoglycan 2	3469	0.039	0.5750	No
32	MMP10	MMP10 Entrez, Source	matrix metallopeptidase 10 (stromelysin 2)	4140	0.028	0.5280	No
33	COL15A1	COL15A1 Entrez, Source	collagen, type XV, alpha 1	4234	0.026	0.5243	No
34	HAPLN1	HAPLN1 Entrez, Source	hyaluronan and proteoglycan link protein 1	4343	0.025	0.5192	No
35	MUC5AC	MUC5AC Entrez, Source	mucin 5AC, oligomeric mucus/gel-forming	4677	0.020	0.4965	No
36	LUM	LUM Entrez, Source	lumican	4728	0.019	0.4951	No
37	COL16A1	COL16A1 Entrez, Source	collagen, type XVI, alpha 1	5051	0.015	0.4727	No
38	MEPE	MEPE Entrez, Source	matrix, extracellular phosphoglycoprotein with ASARM motif (bone)	5473	0.009	0.4421	No
39	PRSS2	PRSS2 Entrez, Source	protease, serine, 2 (trypsin 2)	5591	0.007	0.4341	No
40	LAMA3	LAMA3 Entrez, Source	laminin, alpha 3	6404	-0.003	0.3734	No
41	COL9A1	COL9A1 Entrez, Source	collagen, type IX, alpha 1	6489	-0.004	0.3676	No
42	TFPI2	TFPI2 Entrez, Source	tissue factor pathway inhibitor 2	6771	-0.008	0.3474	No
43	MMP11	MMP11 Entrez, Source	matrix metallopeptidase 11 (stromelysin 3)	6969	-0.010	0.3338	No
44	FBLN5	FBLN5 Entrez, Source	fibulin 5	6975	-0.010	0.3347	No
45	SOD1	SOD1 Entrez, Source	superoxide dismutase 1, soluble (amyotrophic lateral sclerosis 1 (adult))	7962	-0.023	0.2633	No
46	MATN1	MATN1 Entrez, Source	matrilin 1, cartilage matrix protein	8575	-0.032	0.2212	No
47	CAV3	CAV3 Entrez, Source	caveolin 3	8955	-0.037	0.1972	No
48	FMOD	FMOD Entrez, Source	fibromodulin	9724	-0.049	0.1453	No
49	SMC3	SMC3 Entrez, Source	structural maintenance of chromosomes 3	9824	-0.051	0.1441	No
50	CHI3L1	CHI3L1 Entrez, Source	chitinase 3-like 1 (cartilage glycoprotein-39)	9869	-0.051	0.1471	No
51	COL10A1	COL10A1 Entrez, Source	collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)	10315	-0.059	0.1207	No
52	COMP	COMP Entrez, Source	cartilage oligomeric matrix protein	10344	-0.059	0.1259	No
53	FBN2	FBN2 Entrez, Source	fibrillin 2 (congenital contractural arachnodactyly)	10607	-0.064	0.1140	No
54	CHAD	CHAD Entrez, Source	chondroadherin	11454	-0.085	0.0608	No
55	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	12182	-0.111	0.0196	No
56	LTBP4	LTBP4 Entrez, Source	latent transforming growth factor beta binding protein 4	12650	-0.138	0.0013	No
57	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12922	-0.168	0.0014	No
58	COL5A3	COL5A3 Entrez, Source	collagen, type V, alpha 3	13187	-0.246	0.0117	No