Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | FSH_OVARY_MCV152_UP |
| Enrichment Score (ES) | -0.3918781 |
| Normalized Enrichment Score (NES) | -1.2641938 |
| Nominal p-value | 0.1492205 |
| FDR q-value | 0.6078341 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL3A1 | COL3A1 Entrez, Source | collagen, type III, alpha 1 (Ehlers-Danlos syndrome type IV, autosomal dominant) | 15 | 0.737 | 0.2056 | No |
| 2 | DPYSL3 | DPYSL3 Entrez, Source | dihydropyrimidinase-like 3 | 499 | 0.182 | 0.2204 | No |
| 3 | PIR | PIR Entrez, Source | pirin (iron-binding nuclear protein) | 789 | 0.140 | 0.2380 | No |
| 4 | FCGRT | FCGRT Entrez, Source | Fc fragment of IgG, receptor, transporter, alpha | 882 | 0.131 | 0.2678 | No |
| 5 | BFSP1 | BFSP1 Entrez, Source | beaded filament structural protein 1, filensin | 2705 | 0.055 | 0.1463 | No |
| 6 | CLU | CLU Entrez, Source | clusterin | 3299 | 0.043 | 0.1137 | No |
| 7 | GOSR1 | GOSR1 Entrez, Source | golgi SNAP receptor complex member 1 | 4674 | 0.020 | 0.0160 | No |
| 8 | COL16A1 | COL16A1 Entrez, Source | collagen, type XVI, alpha 1 | 5051 | 0.015 | -0.0081 | No |
| 9 | FDPS | FDPS Entrez, Source | farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) | 5077 | 0.014 | -0.0060 | No |
| 10 | AXL | AXL Entrez, Source | AXL receptor tyrosine kinase | 5649 | 0.006 | -0.0472 | No |
| 11 | HNRPDL | HNRPDL Entrez, Source | heterogeneous nuclear ribonucleoprotein D-like | 5830 | 0.004 | -0.0595 | No |
| 12 | CTNNB1 | CTNNB1 Entrez, Source | catenin (cadherin-associated protein), beta 1, 88kDa | 6001 | 0.002 | -0.0717 | No |
| 13 | CASP6 | CASP6 Entrez, Source | caspase 6, apoptosis-related cysteine peptidase | 6148 | 0.000 | -0.0827 | No |
| 14 | NAB1 | NAB1 Entrez, Source | NGFI-A binding protein 1 (EGR1 binding protein 1) | 6874 | -0.009 | -0.1346 | No |
| 15 | CASP1 | CASP1 Entrez, Source | caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase) | 7177 | -0.013 | -0.1537 | No |
| 16 | PSMB4 | PSMB4 Entrez, Source | proteasome (prosome, macropain) subunit, beta type, 4 | 7204 | -0.013 | -0.1520 | No |
| 17 | EEF1A1 | EEF1A1 Entrez, Source | eukaryotic translation elongation factor 1 alpha 1 | 7536 | -0.017 | -0.1721 | No |
| 18 | ATP5I | ATP5I Entrez, Source | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit E | 7717 | -0.020 | -0.1801 | No |
| 19 | SPOP | SPOP Entrez, Source | speckle-type POZ protein | 7775 | -0.020 | -0.1787 | No |
| 20 | ZNF148 | ZNF148 Entrez, Source | zinc finger protein 148 | 7943 | -0.023 | -0.1849 | No |
| 21 | FADS1 | FADS1 Entrez, Source | fatty acid desaturase 1 | 8129 | -0.025 | -0.1916 | No |
| 22 | CYP51A1 | CYP51A1 Entrez, Source | cytochrome P450, family 51, subfamily A, polypeptide 1 | 9103 | -0.039 | -0.2538 | No |
| 23 | SLC4A3 | SLC4A3 Entrez, Source | solute carrier family 4, anion exchanger, member 3 | 9347 | -0.042 | -0.2602 | No |
| 24 | ANK3 | ANK3 Entrez, Source | ankyrin 3, node of Ranvier (ankyrin G) | 9444 | -0.044 | -0.2550 | No |
| 25 | SQLE | SQLE Entrez, Source | squalene epoxidase | 9644 | -0.048 | -0.2566 | No |
| 26 | PDCD4 | PDCD4 Entrez, Source | programmed cell death 4 (neoplastic transformation inhibitor) | 10963 | -0.073 | -0.3354 | No |
| 27 | FDFT1 | FDFT1 Entrez, Source | farnesyl-diphosphate farnesyltransferase 1 | 11716 | -0.093 | -0.3659 | Yes |
| 28 | TM7SF2 | TM7SF2 Entrez, Source | transmembrane 7 superfamily member 2 | 11819 | -0.096 | -0.3466 | Yes |
| 29 | HMGCR | HMGCR Entrez, Source | 3-hydroxy-3-methylglutaryl-Coenzyme A reductase | 11844 | -0.097 | -0.3211 | Yes |
| 30 | IDI1 | IDI1 Entrez, Source | isopentenyl-diphosphate delta isomerase 1 | 12159 | -0.110 | -0.3139 | Yes |
| 31 | RBP1 | RBP1 Entrez, Source | retinol binding protein 1, cellular | 12674 | -0.139 | -0.3136 | Yes |
| 32 | MVD | MVD Entrez, Source | mevalonate (diphospho) decarboxylase | 12678 | -0.140 | -0.2747 | Yes |
| 33 | PSMB9 | PSMB9 Entrez, Source | proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2) | 13079 | -0.204 | -0.2476 | Yes |
| 34 | TNPO1 | TNPO1 Entrez, Source | transportin 1 | 13097 | -0.208 | -0.1906 | Yes |
| 35 | FADS2 | FADS2 Entrez, Source | fatty acid desaturase 2 | 13155 | -0.226 | -0.1314 | Yes |
| 36 | HIST2H2AA3 | HIST2H2AA3 Entrez, Source | histone cluster 2, H2aa3 | 13163 | -0.231 | -0.0673 | Yes |
| 37 | FASN | FASN Entrez, Source | fatty acid synthase | 13241 | -0.288 | 0.0076 | Yes |
