Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | GALINDO_ACT_UP |
Enrichment Score (ES) | 0.5537506 |
Normalized Enrichment Score (NES) | 1.832612 |
Nominal p-value | 0.0 |
FDR q-value | 0.027268909 |
FWER p-Value | 0.908 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | CXCL2 | CXCL2 Entrez,  Source | chemokine (C-X-C motif) ligand 2 | 118 | 0.402 | 0.0638 | Yes |
2 | MARCKSL1 | MARCKSL1 Entrez,  Source | MARCKS-like 1 | 122 | 0.399 | 0.1358 | Yes |
3 | EGR2 | EGR2 Entrez,  Source | early growth response 2 (Krox-20 homolog, Drosophila) | 130 | 0.390 | 0.2059 | Yes |
4 | CCL3 | CCL3 Entrez,  Source | chemokine (C-C motif) ligand 3 | 183 | 0.333 | 0.2623 | Yes |
5 | HERPUD1 | HERPUD1 Entrez,  Source | homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 | 430 | 0.201 | 0.2801 | Yes |
6 | ADORA2B | ADORA2B Entrez,  Source | adenosine A2b receptor | 482 | 0.186 | 0.3098 | Yes |
7 | IER3 | IER3 Entrez,  Source | immediate early response 3 | 598 | 0.165 | 0.3310 | Yes |
8 | PDGFA | PDGFA Entrez,  Source | platelet-derived growth factor alpha polypeptide | 619 | 0.162 | 0.3589 | Yes |
9 | CSF3 | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 685 | 0.152 | 0.3815 | Yes |
10 | PHLDA1 | PHLDA1 Entrez,  Source | pleckstrin homology-like domain, family A, member 1 | 772 | 0.143 | 0.4008 | Yes |
11 | RHOB | RHOB Entrez,  Source | ras homolog gene family, member B | 785 | 0.141 | 0.4254 | Yes |
12 | JUNB | JUNB Entrez,  Source | jun B proto-oncogene | 866 | 0.132 | 0.4433 | Yes |
13 | NFKBIA | NFKBIA Entrez,  Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha | 888 | 0.130 | 0.4653 | Yes |
14 | IL1B | IL1B Entrez,  Source | interleukin 1, beta | 1014 | 0.121 | 0.4777 | Yes |
15 | GADD45B | GADD45B Entrez,  Source | growth arrest and DNA-damage-inducible, beta | 1045 | 0.118 | 0.4968 | Yes |
16 | SPP1 | SPP1 Entrez,  Source | secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) | 1105 | 0.114 | 0.5131 | Yes |
17 | DUSP2 | DUSP2 Entrez,  Source | dual specificity phosphatase 2 | 1208 | 0.109 | 0.5251 | Yes |
18 | DUSP1 | DUSP1 Entrez,  Source | dual specificity phosphatase 1 | 1297 | 0.104 | 0.5374 | Yes |
19 | PLAUR | PLAUR Entrez,  Source | plasminogen activator, urokinase receptor | 1327 | 0.103 | 0.5538 | Yes |
20 | CEBPB | CEBPB Entrez,  Source | CCAAT/enhancer binding protein (C/EBP), beta | 1774 | 0.082 | 0.5349 | No |
21 | ERRFI1 | ERRFI1 Entrez,  Source | ERBB receptor feedback inhibitor 1 | 2071 | 0.071 | 0.5255 | No |
22 | CD14 | CD14 Entrez,  Source | CD14 molecule | 2182 | 0.068 | 0.5294 | No |
23 | CCL5 | CCL5 Entrez,  Source | chemokine (C-C motif) ligand 5 | 2447 | 0.061 | 0.5206 | No |
24 | TMEM49 | TMEM49 Entrez,  Source | transmembrane protein 49 | 2614 | 0.057 | 0.5184 | No |
25 | NAB2 | NAB2 Entrez,  Source | NGFI-A binding protein 2 (EGR1 binding protein 2) | 2730 | 0.054 | 0.5196 | No |
26 | TNF | TNF Entrez,  Source | tumor necrosis factor (TNF superfamily, member 2) | 2770 | 0.053 | 0.5263 | No |
27 | PHLDB1 | PHLDB1 Entrez,  Source | pleckstrin homology-like domain, family B, member 1 | 2805 | 0.053 | 0.5333 | No |
28 | UBC | UBC Entrez,  Source | ubiquitin C | 3136 | 0.046 | 0.5167 | No |
29 | CD44 | CD44 Entrez,  Source | CD44 molecule (Indian blood group) | 3143 | 0.046 | 0.5245 | No |
30 | SQSTM1 | SQSTM1 Entrez,  Source | sequestosome 1 | 3270 | 0.043 | 0.5228 | No |
31 | CCL4 | CCL4 Entrez,  Source | chemokine (C-C motif) ligand 4 | 3468 | 0.039 | 0.5151 | No |
32 | PTPRE | PTPRE Entrez,  Source | protein tyrosine phosphatase, receptor type, E | 3646 | 0.036 | 0.5083 | No |
33 | TXNIP | TXNIP Entrez,  Source | thioredoxin interacting protein | 3975 | 0.031 | 0.4892 | No |
34 | TNFSF9 | TNFSF9 Entrez,  Source | tumor necrosis factor (ligand) superfamily, member 9 | 4248 | 0.026 | 0.4734 | No |
35 | UBB | UBB Entrez,  Source | ubiquitin B | 4379 | 0.024 | 0.4680 | No |
36 | SCD | SCD Entrez,  Source | stearoyl-CoA desaturase (delta-9-desaturase) | 5035 | 0.015 | 0.4214 | No |
37 | SOCS3 | SOCS3 Entrez,  Source | suppressor of cytokine signaling 3 | 5260 | 0.012 | 0.4066 | No |
38 | GADD45A | GADD45A Entrez,  Source | growth arrest and DNA-damage-inducible, alpha | 5788 | 0.005 | 0.3678 | No |
39 | ODC1 | ODC1 Entrez,  Source | ornithine decarboxylase 1 | 5974 | 0.002 | 0.3543 | No |
40 | BCL10 | BCL10 Entrez,  Source | B-cell CLL/lymphoma 10 | 6386 | -0.003 | 0.3239 | No |
41 | EHD1 | EHD1 Entrez,  Source | EH-domain containing 1 | 6660 | -0.007 | 0.3046 | No |
42 | BHLHB2 | BHLHB2 Entrez,  Source | basic helix-loop-helix domain containing, class B, 2 | 7852 | -0.021 | 0.2188 | No |
43 | FOSL1 | FOSL1 Entrez,  Source | FOS-like antigen 1 | 8279 | -0.028 | 0.1917 | No |
44 | BCL2L11 | BCL2L11 Entrez,  Source | BCL2-like 11 (apoptosis facilitator) | 8410 | -0.030 | 0.1873 | No |
45 | NFKB1 | NFKB1 Entrez,  Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (p105) | 9252 | -0.041 | 0.1314 | No |
46 | SRPR | SRPR Entrez,  Source | signal recognition particle receptor ('docking protein') | 9820 | -0.051 | 0.0979 | No |
47 | TSC22D1 | TSC22D1 Entrez,  Source | TSC22 domain family, member 1 | 9967 | -0.053 | 0.0965 | No |
48 | PTGS2 | PTGS2 Entrez,  Source | prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) | 10192 | -0.057 | 0.0898 | No |
49 | IL1RN | IL1RN Entrez,  Source | interleukin 1 receptor antagonist | 10196 | -0.057 | 0.0999 | No |
50 | VEGF | VEGF Entrez,  Source | vascular endothelial growth factor | 10686 | -0.066 | 0.0750 | No |
51 | PDLIM7 | PDLIM7 Entrez,  Source | PDZ and LIM domain 7 (enigma) | 11377 | -0.083 | 0.0381 | No |
52 | PIM1 | PIM1 Entrez,  Source | pim-1 oncogene | 11624 | -0.090 | 0.0358 | No |
53 | RAC2 | RAC2 Entrez,  Source | ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) | 11635 | -0.090 | 0.0513 | No |
54 | TAPBP | TAPBP Entrez,  Source | TAP binding protein (tapasin) | 12109 | -0.108 | 0.0352 | No |
55 | NFKB2 | NFKB2 Entrez,  Source | nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) | 12596 | -0.134 | 0.0229 | No |
56 | ICAM1 | ICAM1 Entrez,  Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 12996 | -0.183 | 0.0260 | No |