Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | GCGSCMNTTT_UNKNOWN |
| Enrichment Score (ES) | -0.49644575 |
| Normalized Enrichment Score (NES) | -1.4631057 |
| Nominal p-value | 0.078947365 |
| FDR q-value | 0.37316385 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | POU2F1 | POU2F1 Entrez, Source | POU domain, class 2, transcription factor 1 | 1475 | 0.095 | -0.0637 | No |
| 2 | PITX1 | PITX1 Entrez, Source | paired-like homeodomain transcription factor 1 | 1479 | 0.095 | -0.0170 | No |
| 3 | BCLAF1 | BCLAF1 Entrez, Source | BCL2-associated transcription factor 1 | 1588 | 0.090 | 0.0192 | No |
| 4 | HOXA2 | HOXA2 Entrez, Source | homeobox A2 | 1629 | 0.088 | 0.0596 | No |
| 5 | KCNK9 | KCNK9 Entrez, Source | potassium channel, subfamily K, member 9 | 2081 | 0.071 | 0.0606 | No |
| 6 | CD4 | CD4 Entrez, Source | CD4 molecule | 2305 | 0.064 | 0.0757 | No |
| 7 | GPC3 | GPC3 Entrez, Source | glypican 3 | 2514 | 0.059 | 0.0894 | No |
| 8 | RAB1A | RAB1A Entrez, Source | RAB1A, member RAS oncogene family | 4681 | 0.020 | -0.0634 | No |
| 9 | PPP2R2A | PPP2R2A Entrez, Source | protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), alpha isoform | 4968 | 0.016 | -0.0771 | No |
| 10 | RAC1 | RAC1 Entrez, Source | ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) | 6128 | 0.000 | -0.1640 | No |
| 11 | DNAJC7 | DNAJC7 Entrez, Source | DnaJ (Hsp40) homolog, subfamily C, member 7 | 6595 | -0.006 | -0.1962 | No |
| 12 | MYST2 | MYST2 Entrez, Source | MYST histone acetyltransferase 2 | 7417 | -0.016 | -0.2502 | No |
| 13 | SAFB | SAFB Entrez, Source | scaffold attachment factor B | 7539 | -0.017 | -0.2508 | No |
| 14 | ADK | ADK Entrez, Source | adenosine kinase | 7944 | -0.023 | -0.2699 | No |
| 15 | SFRS2 | SFRS2 Entrez, Source | splicing factor, arginine/serine-rich 2 | 8111 | -0.025 | -0.2699 | No |
| 16 | USP11 | USP11 Entrez, Source | ubiquitin specific peptidase 11 | 9055 | -0.038 | -0.3218 | No |
| 17 | TARDBP | TARDBP Entrez, Source | TAR DNA binding protein | 9687 | -0.048 | -0.3452 | No |
| 18 | PAICS | PAICS Entrez, Source | phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase | 10929 | -0.072 | -0.4030 | No |
| 19 | MCM7 | MCM7 Entrez, Source | MCM7 minichromosome maintenance deficient 7 (S. cerevisiae) | 12174 | -0.110 | -0.4419 | Yes |
| 20 | PHF12 | PHF12 Entrez, Source | PHD finger protein 12 | 12208 | -0.112 | -0.3892 | Yes |
| 21 | YARS | YARS Entrez, Source | tyrosyl-tRNA synthetase | 12233 | -0.113 | -0.3353 | Yes |
| 22 | NEUROD1 | NEUROD1 Entrez, Source | neurogenic differentiation 1 | 12563 | -0.132 | -0.2945 | Yes |
| 23 | COL27A1 | COL27A1 Entrez, Source | collagen, type XXVII, alpha 1 | 12813 | -0.154 | -0.2370 | Yes |
| 24 | PPAT | PPAT Entrez, Source | phosphoribosyl pyrophosphate amidotransferase | 12816 | -0.154 | -0.1609 | Yes |
| 25 | PSPC1 | PSPC1 Entrez, Source | paraspeckle component 1 | 13300 | -0.405 | 0.0032 | Yes |
