Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | GGARNTKYCCA_UNKNOWN |
| Enrichment Score (ES) | 0.601174 |
| Normalized Enrichment Score (NES) | 1.8145901 |
| Nominal p-value | 0.003649635 |
| FDR q-value | 0.029816715 |
| FWER p-Value | 0.953 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | COL1A2 | COL1A2 Entrez, Source | collagen, type I, alpha 2 | 3 | 1.046 | 0.2168 | Yes |
| 2 | MAP3K8 | MAP3K8 Entrez, Source | mitogen-activated protein kinase kinase kinase 8 | 27 | 0.668 | 0.3538 | Yes |
| 3 | TMEM27 | TMEM27 Entrez, Source | transmembrane protein 27 | 36 | 0.635 | 0.4850 | Yes |
| 4 | GPM6A | GPM6A Entrez, Source | glycoprotein M6A | 221 | 0.305 | 0.5344 | Yes |
| 5 | CPLX2 | CPLX2 Entrez, Source | complexin 2 | 347 | 0.231 | 0.5729 | Yes |
| 6 | CYR61 | CYR61 Entrez, Source | cysteine-rich, angiogenic inducer, 61 | 559 | 0.171 | 0.5925 | Yes |
| 7 | ITGA1 | ITGA1 Entrez, Source | integrin, alpha 1 | 936 | 0.126 | 0.5904 | Yes |
| 8 | DLGAP4 | DLGAP4 Entrez, Source | discs, large (Drosophila) homolog-associated protein 4 | 1317 | 0.103 | 0.5833 | Yes |
| 9 | NELL2 | NELL2 Entrez, Source | NEL-like 2 (chicken) | 1551 | 0.091 | 0.5848 | Yes |
| 10 | RAMP2 | RAMP2 Entrez, Source | receptor (calcitonin) activity modifying protein 2 | 1641 | 0.087 | 0.5962 | Yes |
| 11 | NPDC1 | NPDC1 Entrez, Source | neural proliferation, differentiation and control, 1 | 1798 | 0.080 | 0.6012 | Yes |
| 12 | NFIB | NFIB Entrez, Source | nuclear factor I/B | 3057 | 0.047 | 0.5165 | No |
| 13 | SLC6A9 | SLC6A9 Entrez, Source | solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | 3495 | 0.039 | 0.4916 | No |
| 14 | CAPN9 | CAPN9 Entrez, Source | calpain 9 | 3609 | 0.037 | 0.4908 | No |
| 15 | MSX1 | MSX1 Entrez, Source | msh homeobox homolog 1 (Drosophila) | 4536 | 0.022 | 0.4257 | No |
| 16 | PTGES | PTGES Entrez, Source | prostaglandin E synthase | 4675 | 0.020 | 0.4195 | No |
| 17 | CX36 | CX36 Entrez, Source | - | 5108 | 0.014 | 0.3899 | No |
| 18 | MEF2D | MEF2D Entrez, Source | MADS box transcription enhancer factor 2, polypeptide D (myocyte enhancer factor 2D) | 6025 | 0.002 | 0.3214 | No |
| 19 | ATP1B3 | ATP1B3 Entrez, Source | ATPase, Na+/K+ transporting, beta 3 polypeptide | 6301 | -0.002 | 0.3012 | No |
| 20 | SRPX | SRPX Entrez, Source | sushi-repeat-containing protein, X-linked | 6552 | -0.005 | 0.2834 | No |
| 21 | NTRK3 | NTRK3 Entrez, Source | neurotrophic tyrosine kinase, receptor, type 3 | 7472 | -0.016 | 0.2178 | No |
| 22 | DNAJA1 | DNAJA1 Entrez, Source | DnaJ (Hsp40) homolog, subfamily A, member 1 | 7683 | -0.019 | 0.2060 | No |
| 23 | PPFIA3 | PPFIA3 Entrez, Source | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3 | 7826 | -0.021 | 0.1997 | No |
| 24 | SCAMP1 | SCAMP1 Entrez, Source | secretory carrier membrane protein 1 | 8093 | -0.025 | 0.1849 | No |
| 25 | HCN1 | HCN1 Entrez, Source | hyperpolarization activated cyclic nucleotide-gated potassium channel 1 | 8248 | -0.027 | 0.1789 | No |
| 26 | SOCS2 | SOCS2 Entrez, Source | suppressor of cytokine signaling 2 | 8876 | -0.036 | 0.1392 | No |
| 27 | IFNB1 | IFNB1 Entrez, Source | interferon, beta 1, fibroblast | 9678 | -0.048 | 0.0891 | No |
| 28 | STIP1 | STIP1 Entrez, Source | stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) | 10313 | -0.059 | 0.0536 | No |
| 29 | CD86 | CD86 Entrez, Source | CD86 molecule | 10637 | -0.065 | 0.0428 | No |
| 30 | VEGF | VEGF Entrez, Source | vascular endothelial growth factor | 10686 | -0.066 | 0.0529 | No |
| 31 | DDX17 | DDX17 Entrez, Source | DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 | 10688 | -0.066 | 0.0665 | No |
| 32 | PELO | PELO Entrez, Source | pelota homolog (Drosophila) | 10844 | -0.069 | 0.0693 | No |
| 33 | FXYD2 | FXYD2 Entrez, Source | FXYD domain containing ion transport regulator 2 | 11644 | -0.090 | 0.0279 | No |
| 34 | GABRE | GABRE Entrez, Source | gamma-aminobutyric acid (GABA) A receptor, epsilon | 11946 | -0.101 | 0.0262 | No |
| 35 | XPO1 | XPO1 Entrez, Source | exportin 1 (CRM1 homolog, yeast) | 12235 | -0.113 | 0.0279 | No |
| 36 | OGT | OGT Entrez, Source | O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) | 12390 | -0.121 | 0.0414 | No |
| 37 | EGF | EGF Entrez, Source | epidermal growth factor (beta-urogastrone) | 12737 | -0.145 | 0.0455 | No |
