Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | GTTATAT,MIR-410 |
| Enrichment Score (ES) | 0.54577655 |
| Normalized Enrichment Score (NES) | 1.789243 |
| Nominal p-value | 0.0035273368 |
| FDR q-value | 0.03323162 |
| FWER p-Value | 0.976 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ADM | ADM Entrez, Source | adrenomedullin | 34 | 0.649 | 0.1236 | Yes |
| 2 | PRKAR2B | PRKAR2B Entrez, Source | protein kinase, cAMP-dependent, regulatory, type II, beta | 69 | 0.494 | 0.2171 | Yes |
| 3 | MAF | MAF Entrez, Source | v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) | 73 | 0.484 | 0.3110 | Yes |
| 4 | RGS16 | RGS16 Entrez, Source | regulator of G-protein signalling 16 | 126 | 0.391 | 0.3833 | Yes |
| 5 | CITED2 | CITED2 Entrez, Source | Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 | 145 | 0.367 | 0.4532 | Yes |
| 6 | DPYSL2 | DPYSL2 Entrez, Source | dihydropyrimidinase-like 2 | 366 | 0.223 | 0.4801 | Yes |
| 7 | OTX2 | OTX2 Entrez, Source | orthodenticle homolog 2 (Drosophila) | 708 | 0.150 | 0.4835 | Yes |
| 8 | NR2F2 | NR2F2 Entrez, Source | nuclear receptor subfamily 2, group F, member 2 | 806 | 0.139 | 0.5033 | Yes |
| 9 | HS3ST1 | HS3ST1 Entrez, Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 1 | 830 | 0.136 | 0.5280 | Yes |
| 10 | GDF8 | GDF8 Entrez, Source | growth differentiation factor 8 | 923 | 0.127 | 0.5458 | Yes |
| 11 | LAMP2 | LAMP2 Entrez, Source | lysosomal-associated membrane protein 2 | 1467 | 0.095 | 0.5235 | No |
| 12 | HMGB1 | HMGB1 Entrez, Source | high-mobility group box 1 | 1582 | 0.090 | 0.5324 | No |
| 13 | SP3 | SP3 Entrez, Source | Sp3 transcription factor | 2512 | 0.059 | 0.4741 | No |
| 14 | RAB8B | RAB8B Entrez, Source | RAB8B, member RAS oncogene family | 2568 | 0.058 | 0.4812 | No |
| 15 | CSNK1G1 | CSNK1G1 Entrez, Source | casein kinase 1, gamma 1 | 3161 | 0.045 | 0.4455 | No |
| 16 | HERC4 | HERC4 Entrez, Source | hect domain and RLD 4 | 3688 | 0.035 | 0.4128 | No |
| 17 | CBFB | CBFB Entrez, Source | core-binding factor, beta subunit | 3853 | 0.032 | 0.4068 | No |
| 18 | GRIA2 | GRIA2 Entrez, Source | glutamate receptor, ionotropic, AMPA 2 | 4317 | 0.025 | 0.3769 | No |
| 19 | ADAM10 | ADAM10 Entrez, Source | ADAM metallopeptidase domain 10 | 4533 | 0.022 | 0.3650 | No |
| 20 | TEAD1 | TEAD1 Entrez, Source | TEA domain family member 1 (SV40 transcriptional enhancer factor) | 4615 | 0.021 | 0.3629 | No |
| 21 | NUMB | NUMB Entrez, Source | numb homolog (Drosophila) | 4620 | 0.021 | 0.3666 | No |
| 22 | RAB1A | RAB1A Entrez, Source | RAB1A, member RAS oncogene family | 4681 | 0.020 | 0.3660 | No |
| 23 | IHPK1 | IHPK1 Entrez, Source | inositol hexaphosphate kinase 1 | 5396 | 0.010 | 0.3142 | No |
| 24 | FGF7 | FGF7 Entrez, Source | fibroblast growth factor 7 (keratinocyte growth factor) | 5875 | 0.004 | 0.2789 | No |
| 25 | PCDH8 | PCDH8 Entrez, Source | protocadherin 8 | 5987 | 0.002 | 0.2710 | No |
| 26 | NRXN3 | NRXN3 Entrez, Source | neurexin 3 | 6247 | -0.001 | 0.2518 | No |
| 27 | NTRK2 | NTRK2 Entrez, Source | neurotrophic tyrosine kinase, receptor, type 2 | 7314 | -0.014 | 0.1744 | No |
| 28 | ST8SIA4 | ST8SIA4 Entrez, Source | ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 | 7701 | -0.019 | 0.1492 | No |
| 29 | YIPF4 | YIPF4 Entrez, Source | Yip1 domain family, member 4 | 7935 | -0.023 | 0.1360 | No |
| 30 | SYN2 | SYN2 Entrez, Source | synapsin II | 8219 | -0.027 | 0.1199 | No |
| 31 | MYST3 | MYST3 Entrez, Source | MYST histone acetyltransferase (monocytic leukemia) 3 | 8296 | -0.028 | 0.1196 | No |
| 32 | GDF6 | GDF6 Entrez, Source | growth differentiation factor 6 | 8556 | -0.032 | 0.1063 | No |
| 33 | ITPKB | ITPKB Entrez, Source | inositol 1,4,5-trisphosphate 3-kinase B | 8579 | -0.032 | 0.1108 | No |
| 34 | ETS1 | ETS1 Entrez, Source | v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) | 8706 | -0.034 | 0.1079 | No |
| 35 | QKI | QKI Entrez, Source | quaking homolog, KH domain RNA binding (mouse) | 8721 | -0.034 | 0.1135 | No |
| 36 | TNFSF11 | TNFSF11 Entrez, Source | tumor necrosis factor (ligand) superfamily, member 11 | 8840 | -0.035 | 0.1115 | No |
| 37 | RERE | RERE Entrez, Source | arginine-glutamic acid dipeptide (RE) repeats | 9139 | -0.039 | 0.0967 | No |
| 38 | ST18 | ST18 Entrez, Source | suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein) | 9371 | -0.043 | 0.0877 | No |
| 39 | ARID4B | ARID4B Entrez, Source | AT rich interactive domain 4B (RBP1- like) | 10287 | -0.058 | 0.0302 | No |
| 40 | ATP2B2 | ATP2B2 Entrez, Source | ATPase, Ca++ transporting, plasma membrane 2 | 10577 | -0.064 | 0.0208 | No |
| 41 | RAI14 | RAI14 Entrez, Source | retinoic acid induced 14 | 10917 | -0.071 | 0.0092 | No |
| 42 | RDX | RDX Entrez, Source | radixin | 11042 | -0.074 | 0.0143 | No |
| 43 | NR3C1 | NR3C1 Entrez, Source | nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) | 11271 | -0.081 | 0.0128 | No |
| 44 | SP4 | SP4 Entrez, Source | Sp4 transcription factor | 11422 | -0.084 | 0.0179 | No |
| 45 | YY1 | YY1 Entrez, Source | YY1 transcription factor | 11474 | -0.086 | 0.0307 | No |
| 46 | SCAMP5 | SCAMP5 Entrez, Source | secretory carrier membrane protein 5 | 12207 | -0.112 | -0.0026 | No |
| 47 | CASK | CASK Entrez, Source | calcium/calmodulin-dependent serine protein kinase (MAGUK family) | 12276 | -0.115 | 0.0146 | No |
| 48 | FMR1 | FMR1 Entrez, Source | fragile X mental retardation 1 | 12694 | -0.141 | 0.0107 | No |
| 49 | DOCK9 | DOCK9 Entrez, Source | dedicator of cytokinesis 9 | 13037 | -0.195 | 0.0229 | No |
