Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | HYPOXIA_FIBRO_UP |
| Enrichment Score (ES) | 0.7784407 |
| Normalized Enrichment Score (NES) | 2.0013344 |
| Nominal p-value | 0.0018416207 |
| FDR q-value | 0.0054103145 |
| FWER p-Value | 0.206 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | SERPINE1 | SERPINE1 Entrez, Source | serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 | 12 | 0.803 | 0.2285 | Yes |
| 2 | PFKP | PFKP Entrez, Source | phosphofructokinase, platelet | 52 | 0.576 | 0.3902 | Yes |
| 3 | ANGPTL4 | ANGPTL4 Entrez, Source | angiopoietin-like 4 | 147 | 0.365 | 0.4873 | Yes |
| 4 | AMPD3 | AMPD3 Entrez, Source | adenosine monophosphate deaminase (isoform E) | 180 | 0.337 | 0.5811 | Yes |
| 5 | F3 | F3 Entrez, Source | coagulation factor III (thromboplastin, tissue factor) | 418 | 0.205 | 0.6218 | Yes |
| 6 | JUN | JUN Entrez, Source | jun oncogene | 458 | 0.194 | 0.6742 | Yes |
| 7 | ADFP | ADFP Entrez, Source | adipose differentiation-related protein | 550 | 0.172 | 0.7166 | Yes |
| 8 | IGFBP3 | IGFBP3 Entrez, Source | insulin-like growth factor binding protein 3 | 567 | 0.170 | 0.7640 | Yes |
| 9 | BNIP3 | BNIP3 Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3 | 1177 | 0.111 | 0.7499 | Yes |
| 10 | SLC2A1 | SLC2A1 Entrez, Source | solute carrier family 2 (facilitated glucose transporter), member 1 | 1212 | 0.109 | 0.7784 | Yes |
| 11 | BNIP3L | BNIP3L Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 1863 | 0.078 | 0.7519 | No |
| 12 | ALDOA | ALDOA Entrez, Source | aldolase A, fructose-bisphosphate | 2140 | 0.069 | 0.7508 | No |
| 13 | ALDOC | ALDOC Entrez, Source | aldolase C, fructose-bisphosphate | 5585 | 0.007 | 0.4944 | No |
| 14 | ENO2 | ENO2 Entrez, Source | enolase 2 (gamma, neuronal) | 6221 | -0.001 | 0.4470 | No |
| 15 | PDLIM4 | PDLIM4 Entrez, Source | PDZ and LIM domain 4 | 10146 | -0.056 | 0.1685 | No |
| 16 | VEGF | VEGF Entrez, Source | vascular endothelial growth factor | 10686 | -0.066 | 0.1469 | No |
| 17 | ICAM1 | ICAM1 Entrez, Source | intercellular adhesion molecule 1 (CD54), human rhinovirus receptor | 12996 | -0.183 | 0.0260 | No |
