Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | IDX_TSA_UP_CLUSTER1 |
| Enrichment Score (ES) | 0.7165875 |
| Normalized Enrichment Score (NES) | 1.9523933 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.008781673 |
| FWER p-Value | 0.369 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | CTGF | CTGF Entrez, Source | connective tissue growth factor | 32 | 0.660 | 0.2823 | Yes |
| 2 | DNAJB4 | DNAJB4 Entrez, Source | DnaJ (Hsp40) homolog, subfamily B, member 4 | 278 | 0.263 | 0.3773 | Yes |
| 3 | SGK | SGK Entrez, Source | serum/glucocorticoid regulated kinase | 330 | 0.237 | 0.4757 | Yes |
| 4 | IER3 | IER3 Entrez, Source | immediate early response 3 | 598 | 0.165 | 0.5269 | Yes |
| 5 | PHLDA1 | PHLDA1 Entrez, Source | pleckstrin homology-like domain, family A, member 1 | 772 | 0.143 | 0.5754 | Yes |
| 6 | WEE1 | WEE1 Entrez, Source | WEE1 homolog (S. pombe) | 1001 | 0.121 | 0.6107 | Yes |
| 7 | PER1 | PER1 Entrez, Source | period homolog 1 (Drosophila) | 1347 | 0.101 | 0.6286 | Yes |
| 8 | THBD | THBD Entrez, Source | thrombomodulin | 1364 | 0.100 | 0.6707 | Yes |
| 9 | CEBPB | CEBPB Entrez, Source | CCAAT/enhancer binding protein (C/EBP), beta | 1774 | 0.082 | 0.6752 | Yes |
| 10 | ERRFI1 | ERRFI1 Entrez, Source | ERBB receptor feedback inhibitor 1 | 2071 | 0.071 | 0.6835 | Yes |
| 11 | ID3 | ID3 Entrez, Source | inhibitor of DNA binding 3, dominant negative helix-loop-helix protein | 2181 | 0.068 | 0.7046 | Yes |
| 12 | SLC25A25 | SLC25A25 Entrez, Source | solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 | 2382 | 0.063 | 0.7166 | Yes |
| 13 | LITAF | LITAF Entrez, Source | lipopolysaccharide-induced TNF factor | 3654 | 0.036 | 0.6367 | No |
| 14 | IL6 | IL6 Entrez, Source | interleukin 6 (interferon, beta 2) | 4953 | 0.016 | 0.5461 | No |
| 15 | CEBPD | CEBPD Entrez, Source | CCAAT/enhancer binding protein (C/EBP), delta | 5268 | 0.012 | 0.5275 | No |
| 16 | BAG3 | BAG3 Entrez, Source | BCL2-associated athanogene 3 | 5477 | 0.009 | 0.5156 | No |
| 17 | ELL2 | ELL2 Entrez, Source | elongation factor, RNA polymerase II, 2 | 6213 | -0.001 | 0.4608 | No |
| 18 | NFIL3 | NFIL3 Entrez, Source | nuclear factor, interleukin 3 regulated | 7648 | -0.019 | 0.3612 | No |
| 19 | UNC45A | UNC45A Entrez, Source | unc-45 homolog A (C. elegans) | 8717 | -0.034 | 0.2957 | No |
| 20 | TSC22D1 | TSC22D1 Entrez, Source | TSC22 domain family, member 1 | 9967 | -0.053 | 0.2248 | No |
| 21 | VEGF | VEGF Entrez, Source | vascular endothelial growth factor | 10686 | -0.066 | 0.1994 | No |
