Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | IGF_VS_PDGF_DN |
| Enrichment Score (ES) | 0.6685446 |
| Normalized Enrichment Score (NES) | 1.8103993 |
| Nominal p-value | 0.0017921147 |
| FDR q-value | 0.030690664 |
| FWER p-Value | 0.959 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | MGP | MGP Entrez, Source | matrix Gla protein | 62 | 0.533 | 0.2127 | Yes |
| 2 | F2R | F2R Entrez, Source | coagulation factor II (thrombin) receptor | 89 | 0.456 | 0.3966 | Yes |
| 3 | FBXO32 | FBXO32 Entrez, Source | F-box protein 32 | 206 | 0.318 | 0.5177 | Yes |
| 4 | F3 | F3 Entrez, Source | coagulation factor III (thromboplastin, tissue factor) | 418 | 0.205 | 0.5854 | Yes |
| 5 | THBD | THBD Entrez, Source | thrombomodulin | 1364 | 0.100 | 0.5554 | Yes |
| 6 | CAPG | CAPG Entrez, Source | capping protein (actin filament), gelsolin-like | 1510 | 0.093 | 0.5826 | Yes |
| 7 | ERRFI1 | ERRFI1 Entrez, Source | ERBB receptor feedback inhibitor 1 | 2071 | 0.071 | 0.5694 | Yes |
| 8 | CAV2 | CAV2 Entrez, Source | caveolin 2 | 2151 | 0.069 | 0.5915 | Yes |
| 9 | DUSP4 | DUSP4 Entrez, Source | dual specificity phosphatase 4 | 2162 | 0.068 | 0.6185 | Yes |
| 10 | PRKG2 | PRKG2 Entrez, Source | protein kinase, cGMP-dependent, type II | 2211 | 0.067 | 0.6422 | Yes |
| 11 | ATP1A3 | ATP1A3 Entrez, Source | ATPase, Na+/K+ transporting, alpha 3 polypeptide | 2228 | 0.066 | 0.6681 | Yes |
| 12 | GREM1 | GREM1 Entrez, Source | gremlin 1, cysteine knot superfamily, homolog (Xenopus laevis) | 2542 | 0.059 | 0.6685 | Yes |
| 13 | CRYL1 | CRYL1 Entrez, Source | crystallin, lambda 1 | 2849 | 0.052 | 0.6667 | No |
| 14 | TIMP1 | TIMP1 Entrez, Source | TIMP metallopeptidase inhibitor 1 | 3256 | 0.044 | 0.6539 | No |
| 15 | PHEX | PHEX Entrez, Source | phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets) | 3518 | 0.038 | 0.6500 | No |
| 16 | DUSP6 | DUSP6 Entrez, Source | dual specificity phosphatase 6 | 4288 | 0.026 | 0.6027 | No |
| 17 | IL1R1 | IL1R1 Entrez, Source | interleukin 1 receptor, type I | 4666 | 0.020 | 0.5825 | No |
| 18 | DSCR1L1 | DSCR1L1 Entrez, Source | Down syndrome critical region gene 1-like 1 | 4800 | 0.018 | 0.5800 | No |
| 19 | CD53 | CD53 Entrez, Source | CD53 molecule | 5502 | 0.008 | 0.5307 | No |
| 20 | PTGS1 | PTGS1 Entrez, Source | prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) | 5536 | 0.008 | 0.5314 | No |
| 21 | STOM | STOM Entrez, Source | stomatin | 5982 | 0.002 | 0.4989 | No |
| 22 | CDKN2D | CDKN2D Entrez, Source | cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4) | 6859 | -0.009 | 0.4368 | No |
| 23 | BHMT | BHMT Entrez, Source | betaine-homocysteine methyltransferase | 8485 | -0.031 | 0.3273 | No |
| 24 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 9270 | -0.041 | 0.2852 | No |
| 25 | SPAG5 | SPAG5 Entrez, Source | sperm associated antigen 5 | 9793 | -0.050 | 0.2665 | No |
