Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | IMMUNE_EFFECTOR_PROCESS |
| Enrichment Score (ES) | -0.5023781 |
| Normalized Enrichment Score (NES) | -1.3744938 |
| Nominal p-value | 0.11460674 |
| FDR q-value | 0.48781925 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | TNFSF13 | TNFSF13 Entrez, Source | tumor necrosis factor (ligand) superfamily, member 13 | 842 | 0.135 | 0.0129 | No |
| 2 | BNIP3 | BNIP3 Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3 | 1177 | 0.111 | 0.0502 | No |
| 3 | BNIP3L | BNIP3L Entrez, Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 1863 | 0.078 | 0.0426 | No |
| 4 | PTPRC | PTPRC Entrez, Source | protein tyrosine phosphatase, receptor type, C | 2044 | 0.071 | 0.0694 | No |
| 5 | TGFB1 | TGFB1 Entrez, Source | transforming growth factor, beta 1 (Camurati-Engelmann disease) | 2079 | 0.071 | 0.1066 | No |
| 6 | BCL2 | BCL2 Entrez, Source | B-cell CLL/lymphoma 2 | 2324 | 0.064 | 0.1244 | No |
| 7 | APOA1 | APOA1 Entrez, Source | apolipoprotein A-I | 2953 | 0.050 | 0.1053 | No |
| 8 | DEFB103A | DEFB103A Entrez, Source | defensin, beta 103A | 3331 | 0.042 | 0.1006 | No |
| 9 | CD40LG | CD40LG Entrez, Source | CD40 ligand (TNF superfamily, member 5, hyper-IgM syndrome) | 3519 | 0.038 | 0.1082 | No |
| 10 | NCR1 | NCR1 Entrez, Source | natural cytotoxicity triggering receptor 1 | 5135 | 0.013 | -0.0054 | No |
| 11 | APOA2 | APOA2 Entrez, Source | apolipoprotein A-II | 6545 | -0.005 | -0.1084 | No |
| 12 | IL12A | IL12A Entrez, Source | interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35) | 6887 | -0.009 | -0.1288 | No |
| 13 | IL12B | IL12B Entrez, Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 6942 | -0.010 | -0.1272 | No |
| 14 | TARBP2 | TARBP2 Entrez, Source | Tar (HIV-1) RNA binding protein 2 | 8450 | -0.030 | -0.2233 | No |
| 15 | C2 | C2 Entrez, Source | complement component 2 | 9498 | -0.045 | -0.2765 | No |
| 16 | IL4 | IL4 Entrez, Source | interleukin 4 | 10138 | -0.056 | -0.2930 | No |
| 17 | CFHR1 | CFHR1 Entrez, Source | complement factor H-related 1 | 12929 | -0.169 | -0.4072 | Yes |
| 18 | MBL2 | MBL2 Entrez, Source | mannose-binding lectin (protein C) 2, soluble (opsonic defect) | 13189 | -0.247 | -0.2876 | Yes |
| 19 | CD74 | CD74 Entrez, Source | CD74 molecule, major histocompatibility complex, class II invariant chain | 13324 | -0.530 | 0.0014 | Yes |
