Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetIRITANI_ADPROX_VASC
Enrichment Score (ES)0.5893472
Normalized Enrichment Score (NES)2.1605918
Nominal p-value0.0
FDR q-value9.356478E-4
FWER p-Value0.01
Table: GSEA Results Summary



Fig 1: Enrichment plot: IRITANI_ADPROX_VASC   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1COL1A2COL1A2
Entrez,  Source
collagen, type I, alpha 231.0460.0752Yes
2CLDN7CLDN7
Entrez,  Source
claudin 770.9400.1427Yes
3SERPINE1SERPINE1
Entrez,  Source
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1120.8030.2003Yes
4LAMC2LAMC2
Entrez,  Source
laminin, gamma 2140.7700.2557Yes
5PROCRPROCR
Entrez,  Source
protein C receptor, endothelial (EPCR)260.6690.3031Yes
6LDHBLDHB
Entrez,  Source
lactate dehydrogenase B610.5550.3406Yes
7CCL2CCL2
Entrez,  Source
chemokine (C-C motif) ligand 2760.4770.3739Yes
8BGNBGN
Entrez,  Source
biglycan1430.3690.3955Yes
9PRNPPRNP
Entrez,  Source
prion protein (p27-30) (Creutzfeldt-Jakob disease, Gerstmann-Strausler-Scheinker syndrome, fatal familial insomnia)1710.3480.4186Yes
10RGS4RGS4
Entrez,  Source
regulator of G-protein signalling 42190.3080.4372Yes
11TAGLNTAGLN
Entrez,  Source
transgelin2530.2800.4549Yes
12LPXNLPXN
Entrez,  Source
leupaxin3170.2400.4675Yes
13BTG2BTG2
Entrez,  Source
BTG family, member 23260.2380.4840Yes
14JUNJUN
Entrez,  Source
jun oncogene4580.1940.4881Yes
15VEGFCVEGFC
Entrez,  Source
vascular endothelial growth factor C4960.1830.4984Yes
16IGF2BP3IGF2BP3
Entrez,  Source
insulin-like growth factor 2 mRNA binding protein 35610.1710.5059Yes
17IER3IER3
Entrez,  Source
immediate early response 35980.1650.5151Yes
18FLT1FLT1
Entrez,  Source
fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)6990.1500.5184Yes
19CD59CD59
Entrez,  Source
CD59 molecule, complement regulatory protein7100.1490.5284Yes
20RHOBRHOB
Entrez,  Source
ras homolog gene family, member B7850.1410.5330Yes
21NR2F2NR2F2
Entrez,  Source
nuclear receptor subfamily 2, group F, member 28060.1390.5415Yes
22PLA2G4APLA2G4A
Entrez,  Source
phospholipase A2, group IVA (cytosolic, calcium-dependent)8120.1390.5511Yes
23EIF2B2EIF2B2
Entrez,  Source
eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa9240.1270.5519Yes
24RGS10RGS10
Entrez,  Source
regulator of G-protein signalling 1010090.1210.5542Yes
25BASP1BASP1
Entrez,  Source
brain abundant, membrane attached signal protein 110500.1180.5597Yes
26ANXA3ANXA3
Entrez,  Source
annexin A310620.1170.5673Yes
27ARL6IP5ARL6IP5
Entrez,  Source
ADP-ribosylation-like factor 6 interacting protein 511260.1130.5707Yes
28PRG1PRG1
Entrez,  Source
proteoglycan 1, secretory granule12850.1050.5663Yes
29MMP14MMP14
Entrez,  Source
matrix metallopeptidase 14 (membrane-inserted)13120.1040.5718Yes
30SLC38A6SLC38A6
Entrez,  Source
solute carrier family 38, member 613560.1010.5758Yes
31ACTA2ACTA2
Entrez,  Source
actin, alpha 2, smooth muscle, aorta14390.0960.5766Yes
32LAMP2LAMP2
Entrez,  Source
lysosomal-associated membrane protein 214670.0950.5814Yes
33CAPGCAPG
Entrez,  Source
capping protein (actin filament), gelsolin-like15100.0930.5850Yes
34CXCL1CXCL1
Entrez,  Source
chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)15410.0920.5893Yes
35LTBP2LTBP2
Entrez,  Source
latent transforming growth factor beta binding protein 219800.0740.5616No
36ECE1ECE1
Entrez,  Source
endothelin converting enzyme 120480.0710.5617No
37TACSTD2TACSTD2
Entrez,  Source
tumor-associated calcium signal transducer 222000.0670.5551No
38CXCR4CXCR4
Entrez,  Source
chemokine (C-X-C motif) receptor 425970.0580.5294No
39SLC1A1SLC1A1
Entrez,  Source
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 126380.0570.5304No
40PKIAPKIA
Entrez,  Source
protein kinase (cAMP-dependent, catalytic) inhibitor alpha27270.0540.5277No
41ANXA6ANXA6
Entrez,  Source
annexin A629490.0500.5146No
42CD44CD44
Entrez,  Source
CD44 molecule (Indian blood group)31430.0460.5033No
43LPHN2LPHN2
Entrez,  Source
latrophilin 232680.0430.4970No
44CLUCLU
Entrez,  Source
clusterin32990.0430.4978No
45UPP1UPP1
Entrez,  Source
uridine phosphorylase 134890.0390.4864No
46ITGB5ITGB5
Entrez,  Source
integrin, beta 537140.0350.4720No
47SELPSELP
Entrez,  Source
selectin P (granule membrane protein 140kDa, antigen CD62)37540.0340.4715No
48ICAM2ICAM2
Entrez,  Source
intercellular adhesion molecule 245410.0220.4137No
49PFKMPFKM
Entrez,  Source
phosphofructokinase, muscle47340.0190.4006No
50ATP1B1ATP1B1
Entrez,  Source
ATPase, Na+/K+ transporting, beta 1 polypeptide47880.0180.3979No
51NMT2NMT2
Entrez,  Source
N-myristoyltransferase 249170.0160.3894No
52IL6IL6
Entrez,  Source
interleukin 6 (interferon, beta 2)49530.0160.3879No
53ARHGDIBARHGDIB
Entrez,  Source
Rho GDP dissociation inhibitor (GDI) beta50750.0140.3798No
54MT3MT3
Entrez,  Source
metallothionein 3 (growth inhibitory factor (neurotrophic))51020.0140.3789No
55BMP6BMP6
Entrez,  Source
bone morphogenetic protein 654740.0090.3515No
56TCN2TCN2
Entrez,  Source
transcobalamin II; macrocytic anemia55500.0080.3464No
57AXLAXL
Entrez,  Source
AXL receptor tyrosine kinase56490.0060.3394No
58PFN2PFN2
Entrez,  Source
profilin 257380.0050.3331No
59GADD45AGADD45A
Entrez,  Source
growth arrest and DNA-damage-inducible, alpha57880.0050.3298No
60TPM1TPM1
Entrez,  Source
tropomyosin 1 (alpha)59260.0030.3197No
61NISCHNISCH
Entrez,  Source
nischarin60310.0020.3119No
62CAP2CAP2
Entrez,  Source
CAP, adenylate cyclase-associated protein, 2 (yeast)60760.0010.3087No
63ENO2ENO2
Entrez,  Source
enolase 2 (gamma, neuronal)6221-0.0010.2979No
64TGFBITGFBI
Entrez,  Source
transforming growth factor, beta-induced, 68kDa6410-0.0030.2839No
65SRPXSRPX
Entrez,  Source
sushi-repeat-containing protein, X-linked6552-0.0050.2736No
66ALDH2ALDH2
Entrez,  Source
aldehyde dehydrogenase 2 family (mitochondrial)6734-0.0070.2605No
67MT1AMT1A
Entrez,  Source
metallothionein 1A (functional)6871-0.0090.2509No
68LAMA5LAMA5
Entrez,  Source
laminin, alpha 57254-0.0140.2230No
69MAPKAPK3MAPKAPK3
Entrez,  Source
mitogen-activated protein kinase-activated protein kinase 37267-0.0140.2231No
70TFECTFEC
Entrez,  Source
transcription factor EC7275-0.0140.2236No
71CDKN1ACDKN1A
Entrez,  Source
cyclin-dependent kinase inhibitor 1A (p21, Cip1)7976-0.0230.1724No
72TXNRD2TXNRD2
Entrez,  Source
thioredoxin reductase 28114-0.0250.1639No
73SMAD3SMAD3
Entrez,  Source
SMAD, mothers against DPP homolog 3 (Drosophila)8872-0.0360.1093No
74ANPEPANPEP
Entrez,  Source
alanyl (membrane) aminopeptidase (aminopeptidase N, aminopeptidase M, microsomal aminopeptidase, CD13, p150)8993-0.0370.1029No
75IL4RIL4R
Entrez,  Source
interleukin 4 receptor9332-0.0420.0804No
76PGFPGF
Entrez,  Source
placental growth factor, vascular endothelial growth factor-related protein9350-0.0430.0822No
77MLLT11MLLT11
Entrez,  Source
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 119394-0.0430.0821No
78UCHL1UCHL1
Entrez,  Source
ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)9466-0.0440.0799No
79CHST1CHST1
Entrez,  Source
carbohydrate (keratan sulfate Gal-6) sulfotransferase 19600-0.0470.0733No
80CDH2CDH2
Entrez,  Source
cadherin 2, type 1, N-cadherin (neuronal)9642-0.0480.0736No
81TGM2TGM2
Entrez,  Source
transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)9694-0.0490.0733No
82FHL2FHL2
Entrez,  Source
four and a half LIM domains 29790-0.0500.0697No
83PDLIM4PDLIM4
Entrez,  Source
PDZ and LIM domain 410146-0.0560.0469No
84CSPG2CSPG2
Entrez,  Source
chondroitin sulfate proteoglycan 2 (versican)10417-0.0610.0309No
85PLAUPLAU
Entrez,  Source
plasminogen activator, urokinase10548-0.0630.0256No
86MVPMVP
Entrez,  Source
major vault protein10938-0.0720.0014No
87LYL1LYL1
Entrez,  Source
lymphoblastic leukemia derived sequence 111347-0.083-0.0234No
88CTSCCTSC
Entrez,  Source
cathepsin C11373-0.083-0.0193No
89SLC6A8SLC6A8
Entrez,  Source
solute carrier family 6 (neurotransmitter transporter, creatine), member 811625-0.090-0.0318No
90RAC2RAC2
Entrez,  Source
ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)11635-0.090-0.0260No
91SORDSORD
Entrez,  Source
sorbitol dehydrogenase11977-0.102-0.0444No
92EFEMP1EFEMP1
Entrez,  Source
EGF-containing fibulin-like extracellular matrix protein 112182-0.111-0.0518No
93AGRINAGRIN
Entrez,  Source
agrin12183-0.111-0.0439No
94SELESELE
Entrez,  Source
selectin E (endothelial adhesion molecule 1)12624-0.136-0.0673No
95FAPFAP
Entrez,  Source
fibroblast activation protein, alpha12774-0.149-0.0678No
96ICAM1ICAM1
Entrez,  Source
intercellular adhesion molecule 1 (CD54), human rhinovirus receptor12996-0.183-0.0713No
97SLC3A2SLC3A2
Entrez,  Source
solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 213019-0.189-0.0593No
98NRCAMNRCAM
Entrez,  Source
neuronal cell adhesion molecule13028-0.193-0.0460No
99GBP2GBP2
Entrez,  Source
guanylate binding protein 2, interferon-inducible13292-0.382-0.0384No
100SLC7A7SLC7A7
Entrez,  Source
solute carrier family 7 (cationic amino acid transporter, y+ system), member 713328-0.5840.0011No
Table: GSEA details [plain text format]



Fig 2: IRITANI_ADPROX_VASC   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: IRITANI_ADPROX_VASC: Random ES distribution   
Gene set null distribution of ES for IRITANI_ADPROX_VASC