Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | LEE_DENA_UP |
| Enrichment Score (ES) | 0.6959288 |
| Normalized Enrichment Score (NES) | 2.151939 |
| Nominal p-value | 0.0 |
| FDR q-value | 9.5952384E-4 |
| FWER p-Value | 0.011 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | ANXA1 | ANXA1 Entrez, Source | annexin A1 | 10 | 0.815 | 0.1099 | Yes |
| 2 | CD24 | CD24 Entrez, Source | CD24 molecule | 17 | 0.726 | 0.2079 | Yes |
| 3 | LPL | LPL Entrez, Source | lipoprotein lipase | 24 | 0.680 | 0.2998 | Yes |
| 4 | RGS2 | RGS2 Entrez, Source | regulator of G-protein signalling 2, 24kDa | 42 | 0.616 | 0.3820 | Yes |
| 5 | COL4A1 | COL4A1 Entrez, Source | collagen, type IV, alpha 1 | 50 | 0.578 | 0.4599 | Yes |
| 6 | ANKRD1 | ANKRD1 Entrez, Source | ankyrin repeat domain 1 (cardiac muscle) | 63 | 0.532 | 0.5311 | Yes |
| 7 | PLAT | PLAT Entrez, Source | plasminogen activator, tissue | 200 | 0.321 | 0.5645 | Yes |
| 8 | PEA15 | PEA15 Entrez, Source | phosphoprotein enriched in astrocytes 15 | 252 | 0.281 | 0.5988 | Yes |
| 9 | TM4SF4 | TM4SF4 Entrez, Source | transmembrane 4 L six family member 4 | 312 | 0.244 | 0.6274 | Yes |
| 10 | IGFBP1 | IGFBP1 Entrez, Source | insulin-like growth factor binding protein 1 | 531 | 0.177 | 0.6350 | Yes |
| 11 | CPE | CPE Entrez, Source | carboxypeptidase E | 589 | 0.167 | 0.6533 | Yes |
| 12 | FABP4 | FABP4 Entrez, Source | fatty acid binding protein 4, adipocyte | 638 | 0.159 | 0.6713 | Yes |
| 13 | LEPR | LEPR Entrez, Source | leptin receptor | 711 | 0.149 | 0.6862 | Yes |
| 14 | SPP1 | SPP1 Entrez, Source | secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) | 1105 | 0.114 | 0.6721 | Yes |
| 15 | B4GALT6 | B4GALT6 Entrez, Source | UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 | 1117 | 0.114 | 0.6867 | Yes |
| 16 | BCL2A1 | BCL2A1 Entrez, Source | BCL2-related protein A1 | 1231 | 0.108 | 0.6929 | Yes |
| 17 | MFGE8 | MFGE8 Entrez, Source | milk fat globule-EGF factor 8 protein | 1496 | 0.094 | 0.6858 | Yes |
| 18 | ANXA5 | ANXA5 Entrez, Source | annexin A5 | 1550 | 0.092 | 0.6943 | Yes |
| 19 | FBLN2 | FBLN2 Entrez, Source | fibulin 2 | 1714 | 0.084 | 0.6934 | Yes |
| 20 | ANXA2 | ANXA2 Entrez, Source | annexin A2 | 1825 | 0.079 | 0.6959 | Yes |
| 21 | LGMN | LGMN Entrez, Source | legumain | 2054 | 0.071 | 0.6884 | No |
| 22 | GPC3 | GPC3 Entrez, Source | glypican 3 | 2514 | 0.059 | 0.6620 | No |
| 23 | NOTCH3 | NOTCH3 Entrez, Source | Notch homolog 3 (Drosophila) | 3209 | 0.044 | 0.6158 | No |
| 24 | PTPRE | PTPRE Entrez, Source | protein tyrosine phosphatase, receptor type, E | 3646 | 0.036 | 0.5880 | No |
| 25 | PLEK | PLEK Entrez, Source | pleckstrin | 4826 | 0.018 | 0.5017 | No |
| 26 | LCN2 | LCN2 Entrez, Source | lipocalin 2 (oncogene 24p3) | 4934 | 0.016 | 0.4959 | No |
| 27 | ID1 | ID1 Entrez, Source | inhibitor of DNA binding 1, dominant negative helix-loop-helix protein | 5296 | 0.011 | 0.4703 | No |
| 28 | MMP12 | MMP12 Entrez, Source | matrix metallopeptidase 12 (macrophage elastase) | 5434 | 0.009 | 0.4612 | No |
| 29 | PPBP | PPBP Entrez, Source | pro-platelet basic protein (chemokine (C-X-C motif) ligand 7) | 5643 | 0.006 | 0.4464 | No |
| 30 | CD63 | CD63 Entrez, Source | CD63 molecule | 6300 | -0.002 | 0.3974 | No |
| 31 | GATM | GATM Entrez, Source | glycine amidinotransferase (L-arginine:glycine amidinotransferase) | 6337 | -0.002 | 0.3950 | No |
| 32 | NDRG1 | NDRG1 Entrez, Source | N-myc downstream regulated gene 1 | 6962 | -0.010 | 0.3495 | No |
| 33 | LAMA5 | LAMA5 Entrez, Source | laminin, alpha 5 | 7254 | -0.014 | 0.3294 | No |
| 34 | TAGLN2 | TAGLN2 Entrez, Source | transgelin 2 | 7600 | -0.018 | 0.3060 | No |
| 35 | TFF3 | TFF3 Entrez, Source | trefoil factor 3 (intestinal) | 8741 | -0.034 | 0.2249 | No |
| 36 | CSN3 | CSN3 Entrez, Source | casein kappa | 9788 | -0.050 | 0.1530 | No |
| 37 | S100A9 | S100A9 Entrez, Source | S100 calcium binding protein A9 | 10706 | -0.066 | 0.0931 | No |
| 38 | CTSS | CTSS Entrez, Source | cathepsin S | 12022 | -0.104 | 0.0083 | No |
| 39 | SOX9 | SOX9 Entrez, Source | SRY (sex determining region Y)-box 9 (campomelic dysplasia, autosomal sex-reversal) | 12395 | -0.121 | -0.0033 | No |
| 40 | APCS | APCS Entrez, Source | amyloid P component, serum | 12502 | -0.128 | 0.0061 | No |
| 41 | VCAM1 | VCAM1 Entrez, Source | vascular cell adhesion molecule 1 | 13085 | -0.205 | -0.0098 | No |
| 42 | MCM6 | MCM6 Entrez, Source | MCM6 minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) | 13114 | -0.214 | 0.0171 | No |
