Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetNETPATH_IL_3_PATHWAY_UP
Enrichment Score (ES)0.61621493
Normalized Enrichment Score (NES)1.8325408
Nominal p-value0.0035842294
FDR q-value0.027047085
FWER p-Value0.909
Table: GSEA Results Summary



Fig 1: Enrichment plot: NETPATH_IL_3_PATHWAY_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CCL2CCL2
Entrez,  Source
chemokine (C-C motif) ligand 2760.4770.1590Yes
2FOSFOS
Entrez,  Source
v-fos FBJ murine osteosarcoma viral oncogene homolog1420.3710.2820Yes
3CCL3CCL3
Entrez,  Source
chemokine (C-C motif) ligand 31830.3330.3941Yes
4CD69CD69
Entrez,  Source
CD69 molecule8980.1290.3851Yes
5CCR1CCR1
Entrez,  Source
chemokine (C-C motif) receptor 19790.1230.4217Yes
6IL1BIL1B
Entrez,  Source
interleukin 1, beta10140.1210.4608Yes
7SPP1SPP1
Entrez,  Source
secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)11050.1140.4935Yes
8CCL7CCL7
Entrez,  Source
chemokine (C-C motif) ligand 711590.1110.5280Yes
9IL3RAIL3RA
Entrez,  Source
interleukin 3 receptor, alpha (low affinity)12570.1070.5576Yes
10CISHCISH
Entrez,  Source
cytokine inducible SH2-containing protein15730.0900.5651Yes
11CSF1CSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)16830.0860.5864Yes
12ANXA2ANXA2
Entrez,  Source
annexin A218250.0790.6032Yes
13TGFB1TGFB1
Entrez,  Source
transforming growth factor, beta 1 (Camurati-Engelmann disease)20790.0710.6086Yes
14BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 223240.0640.6123Yes
15HBBHBB
Entrez,  Source
hemoglobin, beta27200.0550.6015Yes
16TNFTNF
Entrez,  Source
tumor necrosis factor (TNF superfamily, member 2)27700.0530.6162Yes
17IL6RIL6R
Entrez,  Source
interleukin 6 receptor32410.0440.5960No
18CCL4CCL4
Entrez,  Source
chemokine (C-C motif) ligand 434680.0390.5926No
19MATKMATK
Entrez,  Source
megakaryocyte-associated tyrosine kinase42590.0260.5423No
20BCL2L1BCL2L1
Entrez,  Source
BCL2-like 142700.0260.5504No
21MCL1MCL1
Entrez,  Source
myeloid cell leukemia sequence 1 (BCL2-related)43070.0250.5564No
22KITKIT
Entrez,  Source
v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog43450.0250.5622No
23SOCS3SOCS3
Entrez,  Source
suppressor of cytokine signaling 352600.0120.4975No
24ODC1ODC1
Entrez,  Source
ornithine decarboxylase 159740.0020.4448No
25TGFATGFA
Entrez,  Source
transforming growth factor, alpha7317-0.0140.3490No
26NFIL3NFIL3
Entrez,  Source
nuclear factor, interleukin 3 regulated7648-0.0190.3307No
27MYCMYC
Entrez,  Source
v-myc myelocytomatosis viral oncogene homolog (avian)7715-0.0200.3325No
28RARARARA
Entrez,  Source
retinoic acid receptor, alpha8732-0.0340.2679No
29SOCS2SOCS2
Entrez,  Source
suppressor of cytokine signaling 28876-0.0360.2695No
30SOCS1SOCS1
Entrez,  Source
suppressor of cytokine signaling 18877-0.0360.2819No
31CD86CD86
Entrez,  Source
CD86 molecule10637-0.0650.1722No
32PIM1PIM1
Entrez,  Source
pim-1 oncogene11624-0.0900.1291No
Table: GSEA details [plain text format]



Fig 2: NETPATH_IL_3_PATHWAY_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NETPATH_IL_3_PATHWAY_UP: Random ES distribution   
Gene set null distribution of ES for NETPATH_IL_3_PATHWAY_UP