Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_72h
GeneSetNUCLEAR_PART
Enrichment Score (ES)-0.38237163
Normalized Enrichment Score (NES)-1.7047862
Nominal p-value0.0
FDR q-value0.19829899
FWER p-Value0.998
Table: GSEA Results Summary



Fig 1: Enrichment plot: NUCLEAR_PART   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NOL3NOL3
Entrez,  Source
nucleolar protein 3 (apoptosis repressor with CARD domain)3250.238-0.0104No
2DNAJB9DNAJB9
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily B, member 94370.199-0.0068No
3JUNJUN
Entrez,  Source
jun oncogene4580.1940.0034No
4SCRN1SCRN1
Entrez,  Source
secernin 15680.1700.0054No
5XRCC4XRCC4
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 45860.1670.0142No
6GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)6230.1620.0213No
7RETSATRETSAT
Entrez,  Source
retinol saturase (all-trans-retinol 13,14-reductase)6390.1590.0298No
8LMO4LMO4
Entrez,  Source
LIM domain only 48270.1360.0237No
9BARD1BARD1
Entrez,  Source
BRCA1 associated RING domain 18320.1360.0317No
10PITX2PITX2
Entrez,  Source
paired-like homeodomain transcription factor 28500.1340.0385No
11PPARGC1APPARGC1A
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, alpha10680.1160.0290No
12KLHL7KLHL7
Entrez,  Source
kelch-like 7 (Drosophila)11480.1120.0298No
13BNIP3BNIP3
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 311770.1110.0343No
14NUP50NUP50
Entrez,  Source
nucleoporin 50kDa12280.1080.0371No
15EPAS1EPAS1
Entrez,  Source
endothelial PAS domain protein 113450.1020.0344No
16BUB1BBUB1B
Entrez,  Source
BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)14990.0940.0284No
17TERF2IPTERF2IP
Entrez,  Source
telomeric repeat binding factor 2, interacting protein15540.0910.0298No
18HDAC7AHDAC7A
Entrez,  Source
histone deacetylase 7A15980.0890.0319No
19ATRXATRX
Entrez,  Source
alpha thalassemia/mental retardation syndrome X-linked (RAD54 homolog, S. cerevisiae)16060.0890.0368No
20RTN4RTN4
Entrez,  Source
reticulon 416170.0890.0414No
21BNIP3LBNIP3L
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 3-like18630.0780.0274No
22REPIN1REPIN1
Entrez,  Source
replication initiator 119990.0730.0215No
23PTF1APTF1A
Entrez,  Source
pancreas specific transcription factor, 1a20080.0730.0253No
24MEN1MEN1
Entrez,  Source
multiple endocrine neoplasia I20620.0710.0256No
25ATXN1ATXN1
Entrez,  Source
ataxin 122540.0660.0150No
26BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 223240.0640.0136No
27BREBRE
Entrez,  Source
brain and reproductive organ-expressed (TNFRSF1A modulator)28160.052-0.0208No
28CDK9CDK9
Entrez,  Source
cyclin-dependent kinase 9 (CDC2-related kinase)29150.051-0.0252No
29PCGF6PCGF6
Entrez,  Source
polycomb group ring finger 631300.046-0.0388No
30CIB1CIB1
Entrez,  Source
calcium and integrin binding 1 (calmyrin)32060.045-0.0418No
31STAG3STAG3
Entrez,  Source
stromal antigen 332420.044-0.0418No
32SUMO1SUMO1
Entrez,  Source
SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)33470.042-0.0472No
33MSH2MSH2
Entrez,  Source
mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)34050.040-0.0492No
34HCLS1HCLS1
Entrez,  Source
hematopoietic cell-specific Lyn substrate 135870.037-0.0607No
35SF3B4SF3B4
Entrez,  Source
splicing factor 3b, subunit 4, 49kDa36180.037-0.0608No
36PPP1R9BPPP1R9B
Entrez,  Source
protein phosphatase 1, regulatory subunit 9B, spinophilin37260.035-0.0669No
37TERTTERT
Entrez,  Source
telomerase reverse transcriptase37910.034-0.0697No
38NUP62NUP62
Entrez,  Source
nucleoporin 62kDa37990.033-0.0682No
39REXO4REXO4
Entrez,  Source
REX4, RNA exonuclease 4 homolog (S. cerevisiae)40670.029-0.0869No
40SC65SC65
Entrez,  Source
-40760.029-0.0857No
41KPNA2KPNA2
Entrez,  Source
karyopherin alpha 2 (RAG cohort 1, importin alpha 1)41090.029-0.0864No
42TUBG1TUBG1
Entrez,  Source
tubulin, gamma 142120.027-0.0926No
43NUP98NUP98
Entrez,  Source
nucleoporin 98kDa42170.027-0.0913No
44TAF9TAF9
Entrez,  Source
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa43220.025-0.0977No
45NAP1L2NAP1L2
Entrez,  Source
nucleosome assembly protein 1-like 243540.025-0.0986No
46PPARGC1BPPARGC1B
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, beta43720.024-0.0984No
47PRICKLE1PRICKLE1
Entrez,  Source
prickle homolog 1 (Drosophila)43830.024-0.0977No
48NKX2-5NKX2-5
Entrez,  Source
NK2 transcription factor related, locus 5 (Drosophila)44630.023-0.1024No
49ZCRB1ZCRB1
Entrez,  Source
zinc finger CCHC-type and RNA binding motif 144840.023-0.1025No
50RGS12RGS12
Entrez,  Source
regulator of G-protein signalling 1245610.022-0.1070No
51HTATIPHTATIP
Entrez,  Source
HIV-1 Tat interacting protein, 60kDa46330.021-0.1112No
52U2AF2U2AF2
Entrez,  Source
U2 small nuclear RNA auxiliary factor 246790.020-0.1135No
53TBPTBP
Entrez,  Source
TATA box binding protein46900.020-0.1130No
54ACTBACTB
Entrez,  Source
actin, beta47140.019-0.1136No
55ASNA1ASNA1
Entrez,  Source
arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)47550.019-0.1155No
56DDX19BDDX19B
Entrez,  Source
DEAD (Asp-Glu-Ala-As) box polypeptide 19B48580.017-0.1222No
57ANAPC4ANAPC4
Entrez,  Source
anaphase promoting complex subunit 448650.017-0.1217No
58HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)48920.017-0.1226No
59MCRS1MCRS1
Entrez,  Source
microspherule protein 149510.016-0.1261No
60SLU7SLU7
Entrez,  Source
-49760.016-0.1270No
61NARFNARF
Entrez,  Source
nuclear prelamin A recognition factor51270.014-0.1376No
62NCR1NCR1
Entrez,  Source
natural cytotoxicity triggering receptor 151350.013-0.1373No
63CHEK2CHEK2
Entrez,  Source
CHK2 checkpoint homolog (S. pombe)51390.013-0.1368No
64HSPD1HSPD1
Entrez,  Source
heat shock 60kDa protein 1 (chaperonin)51530.013-0.1370No
65GTF3C2GTF3C2
Entrez,  Source
general transcription factor IIIC, polypeptide 2, beta 110kDa51780.013-0.1380No
66NCOA6NCOA6
Entrez,  Source
nuclear receptor coactivator 651960.013-0.1385No
67ERCC3ERCC3
Entrez,  Source
excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)52840.011-0.1445No
68CHAF1BCHAF1B
Entrez,  Source
chromatin assembly factor 1, subunit B (p60)53770.010-0.1509No
69EMDEMD
Entrez,  Source
emerin (Emery-Dreifuss muscular dystrophy)54280.009-0.1542No
70NF2NF2
Entrez,  Source
neurofibromin 2 (bilateral acoustic neuroma)54660.009-0.1565No
71PAMPAM
Entrez,  Source
peptidylglycine alpha-amidating monooxygenase55010.008-0.1586No
72NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta55210.008-0.1595No
73SMNDC1SMNDC1
Entrez,  Source
survival motor neuron domain containing 155670.007-0.1625No
74EXOSC9EXOSC9
Entrez,  Source
exosome component 956420.006-0.1678No
75GNAZGNAZ
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha z polypeptide56970.006-0.1716No
76FOXE3FOXE3
Entrez,  Source
forkhead box E357460.005-0.1749No
77NBNNBN
Entrez,  Source
nibrin57690.005-0.1763No
78HNRPDLHNRPDL
Entrez,  Source
heterogeneous nuclear ribonucleoprotein D-like58300.004-0.1806No
79COPS2COPS2
Entrez,  Source
COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)58560.004-0.1823No
80NAP1L4NAP1L4
Entrez,  Source
nucleosome assembly protein 1-like 459350.003-0.1881No
81RTCD1RTCD1
Entrez,  Source
RNA terminal phosphate cyclase domain 159930.002-0.1923No
82GIT2GIT2
Entrez,  Source
G protein-coupled receptor kinase interactor 260060.002-0.1931No
83TOP1TOP1
Entrez,  Source
topoisomerase (DNA) I6189-0.000-0.2070No
84ELL2ELL2
Entrez,  Source
elongation factor, RNA polymerase II, 26213-0.001-0.2087No
85RELARELA
Entrez,  Source
v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian)6260-0.001-0.2121No
86TMPOTMPO
Entrez,  Source
thymopoietin6281-0.002-0.2136No
87NFYCNFYC
Entrez,  Source
nuclear transcription factor Y, gamma6397-0.003-0.2222No
88PHF5APHF5A
Entrez,  Source
PHD finger protein 5A6461-0.004-0.2267No
89GUCY2DGUCY2D
Entrez,  Source
guanylate cyclase 2D, membrane (retina-specific)6484-0.004-0.2282No
90NFYANFYA
Entrez,  Source
nuclear transcription factor Y, alpha6517-0.005-0.2303No
91HMGA1HMGA1
Entrez,  Source
high mobility group AT-hook 16574-0.005-0.2343No
92TAF11TAF11
Entrez,  Source
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa6619-0.006-0.2373No
93NRMNRM
Entrez,  Source
nurim (nuclear envelope membrane protein)6665-0.007-0.2403No
94TAF6TAF6
Entrez,  Source
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa6684-0.007-0.2413No
95HDAC5HDAC5
Entrez,  Source
histone deacetylase 56756-0.008-0.2462No
96THRAP3THRAP3
Entrez,  Source
thyroid hormone receptor associated protein 36772-0.008-0.2469No
97SMAD4SMAD4
Entrez,  Source
SMAD, mothers against DPP homolog 4 (Drosophila)6788-0.008-0.2476No
98TTNTTN
Entrez,  Source
titin6911-0.010-0.2563No
99SMC1ASMC1A
Entrez,  Source
structural maintenance of chromosomes 1A6922-0.010-0.2565No
100SMARCA2SMARCA2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 26971-0.010-0.2595No
101OGG1OGG1
Entrez,  Source
8-oxoguanine DNA glycosylase7030-0.011-0.2633No
102CLOCKCLOCK
Entrez,  Source
clock homolog (mouse)7102-0.012-0.2680No
103SF3A2SF3A2
Entrez,  Source
splicing factor 3a, subunit 2, 66kDa7150-0.012-0.2708No
104KLHDC3KLHDC3
Entrez,  Source
kelch domain containing 37160-0.013-0.2707No
105HDAC3HDAC3
Entrez,  Source
histone deacetylase 37165-0.013-0.2703No
106SYMPKSYMPK
Entrez,  Source
symplekin7266-0.014-0.2771No
107PARP1PARP1
Entrez,  Source
poly (ADP-ribose) polymerase family, member 17272-0.014-0.2766No
108KPNA1KPNA1
Entrez,  Source
karyopherin alpha 1 (importin alpha 5)7354-0.015-0.2819No
109LMNB1LMNB1
Entrez,  Source
lamin B17411-0.015-0.2853No
110INTS6INTS6
Entrez,  Source
integrator complex subunit 67424-0.016-0.2852No
111DULLARDDULLARD
Entrez,  Source
dullard homolog (Xenopus laevis)7434-0.016-0.2849No
112DDX47DDX47
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 477436-0.016-0.2841No
113CDC26CDC26
Entrez,  Source
cell division cycle 267451-0.016-0.2842No
114NAP1L1NAP1L1
Entrez,  Source
nucleosome assembly protein 1-like 17512-0.017-0.2877No
115MORF4L2MORF4L2
Entrez,  Source
mortality factor 4 like 27580-0.018-0.2918No
116RALYRALY
Entrez,  Source
RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))7633-0.019-0.2946No
117SNRPBSNRPB
Entrez,  Source
small nuclear ribonucleoprotein polypeptides B and B17790-0.021-0.3053No
118TPRTPR
Entrez,  Source
translocated promoter region (to activated MET oncogene)7863-0.022-0.3095No
119SUB1SUB1
Entrez,  Source
SUB1 homolog (S. cerevisiae)7922-0.022-0.3126No
120ZNF148ZNF148
Entrez,  Source
zinc finger protein 1487943-0.023-0.3127No
121SAP18SAP18
Entrez,  Source
Sin3A-associated protein, 18kDa7954-0.023-0.3121No
122CHEK1CHEK1
Entrez,  Source
CHK1 checkpoint homolog (S. pombe)7980-0.023-0.3126No
123SMARCB1SMARCB1
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 17987-0.023-0.3116No
124NUP153NUP153
Entrez,  Source
nucleoporin 153kDa7992-0.023-0.3105No
125UBE2IUBE2I
Entrez,  Source
ubiquitin-conjugating enzyme E2I (UBC9 homolog, yeast)8006-0.024-0.3101No
126PRM2PRM2
Entrez,  Source
protamine 28050-0.024-0.3119No
127SFRS2SFRS2
Entrez,  Source
splicing factor, arginine/serine-rich 28111-0.025-0.3150No
128DEDDDEDD
Entrez,  Source
death effector domain containing8149-0.026-0.3162No
129RANGAP1RANGAP1
Entrez,  Source
Ran GTPase activating protein 18169-0.026-0.3161No
130GRINL1AGRINL1A
Entrez,  Source
glutamate receptor, ionotropic, N-methyl D-aspartate-like 1A8214-0.027-0.3178No
131HNRPKHNRPK
Entrez,  Source
heterogeneous nuclear ribonucleoprotein K8260-0.027-0.3196No
132LYARLYAR
Entrez,  Source
-8301-0.028-0.3210No
133H2AFYH2AFY
Entrez,  Source
H2A histone family, member Y8311-0.028-0.3200No
134PHBPHB
Entrez,  Source
prohibitin8324-0.028-0.3192No
135NUTF2NUTF2
Entrez,  Source
nuclear transport factor 28594-0.032-0.3378No
136PSEN1PSEN1
Entrez,  Source
presenilin 1 (Alzheimer disease 3)8599-0.032-0.3361No
137NUDT21NUDT21
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 218696-0.034-0.3414No
138SMARCD2SMARCD2
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 28700-0.034-0.3396No
139SMAD2SMAD2
Entrez,  Source
SMAD, mothers against DPP homolog 2 (Drosophila)8847-0.035-0.3486No
140RAD50RAD50
Entrez,  Source
RAD50 homolog (S. cerevisiae)8883-0.036-0.3491No
141EIF5AEIF5A
Entrez,  Source
eukaryotic translation initiation factor 5A8947-0.037-0.3517No
142CPSF3CPSF3
Entrez,  Source
cleavage and polyadenylation specific factor 3, 73kDa8954-0.037-0.3499No
143IKBKAPIKBKAP
Entrez,  Source
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein9104-0.039-0.3590No
144HDAC10HDAC10
Entrez,  Source
histone deacetylase 109127-0.039-0.3583No
145TOP2ATOP2A
Entrez,  Source
topoisomerase (DNA) II alpha 170kDa9154-0.040-0.3578No
146DHX8DHX8
Entrez,  Source
DEAH (Asp-Glu-Ala-His) box polypeptide 89187-0.040-0.3579No
147RPL3RPL3
Entrez,  Source
ribosomal protein L39257-0.041-0.3606No
148SMARCD3SMARCD3
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 39321-0.042-0.3629No
149RAE1RAE1
Entrez,  Source
RAE1 RNA export 1 homolog (S. pombe)9329-0.042-0.3609No
150NPM2NPM2
Entrez,  Source
nucleophosmin/nucleoplasmin, 29330-0.042-0.3583No
151DNMT3ADNMT3A
Entrez,  Source
DNA (cytosine-5-)-methyltransferase 3 alpha9385-0.043-0.3598No
152DKC1DKC1
Entrez,  Source
dyskeratosis congenita 1, dyskerin9386-0.043-0.3572No
153PSEN2PSEN2
Entrez,  Source
presenilin 2 (Alzheimer disease 4)9416-0.044-0.3568No
154NCLNCL
Entrez,  Source
nucleolin9448-0.044-0.3565No
155DHCR7DHCR7
Entrez,  Source
7-dehydrocholesterol reductase9455-0.044-0.3542No
156PAX8PAX8
Entrez,  Source
paired box gene 89468-0.044-0.3525No
157IMP4IMP4
Entrez,  Source
IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)9749-0.049-0.3709No
158SMC3SMC3
Entrez,  Source
structural maintenance of chromosomes 39824-0.051-0.3734No
159PNMA1PNMA1
Entrez,  Source
paraneoplastic antigen MA19848-0.051-0.3721No
160MATR3MATR3
Entrez,  Source
matrin 39874-0.051-0.3709No
161HOXC10HOXC10
Entrez,  Source
homeobox C109987-0.053-0.3762No
162MRPL19MRPL19
Entrez,  Source
mitochondrial ribosomal protein L1910051-0.054-0.3778No
163ZBTB16ZBTB16
Entrez,  Source
zinc finger and BTB domain containing 1610088-0.055-0.3772No
164RPL11RPL11
Entrez,  Source
ribosomal protein L1110157-0.056-0.3790Yes
165NOC4LNOC4L
Entrez,  Source
nucleolar complex associated 4 homolog (S. cerevisiae)10159-0.056-0.3756Yes
166DDX24DDX24
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 2410166-0.056-0.3727Yes
167GEMIN6GEMIN6
Entrez,  Source
gem (nuclear organelle) associated protein 610170-0.056-0.3695Yes
168SENP2SENP2
Entrez,  Source
SUMO1/sentrin/SMT3 specific peptidase 210180-0.056-0.3668Yes
169RUVBL2RUVBL2
Entrez,  Source
RuvB-like 2 (E. coli)10227-0.057-0.3668Yes
170KPNA3KPNA3
Entrez,  Source
karyopherin alpha 3 (importin alpha 4)10274-0.058-0.3668Yes
171COILCOIL
Entrez,  Source
coilin10471-0.062-0.3781Yes
172FGF18FGF18
Entrez,  Source
fibroblast growth factor 1810472-0.062-0.3743Yes
173MED4MED4
Entrez,  Source
mediator of RNA polymerase II transcription, subunit 4 homolog (S. cerevisiae)10512-0.062-0.3735Yes
174GTF2F1GTF2F1
Entrez,  Source
general transcription factor IIF, polypeptide 1, 74kDa10529-0.063-0.3709Yes
175PRPF8PRPF8
Entrez,  Source
PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)10586-0.064-0.3713Yes
176NUP107NUP107
Entrez,  Source
nucleoporin 107kDa10603-0.064-0.3686Yes
177ATXN3ATXN3
Entrez,  Source
ataxin 310628-0.065-0.3665Yes
178MPGMPG
Entrez,  Source
N-methylpurine-DNA glycosylase10650-0.065-0.3642Yes
179SMARCA4SMARCA4
Entrez,  Source
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 410677-0.066-0.3622Yes
180RPP38RPP38
Entrez,  Source
ribonuclease P/MRP 38kDa subunit10683-0.066-0.3586Yes
181PPIGPPIG
Entrez,  Source
peptidylprolyl isomerase G (cyclophilin G)10743-0.067-0.3590Yes
182SNRPNSNRPN
Entrez,  Source
small nuclear ribonucleoprotein polypeptide N10762-0.067-0.3563Yes
183HDAC2HDAC2
Entrez,  Source
histone deacetylase 210765-0.068-0.3523Yes
184DDX56DDX56
Entrez,  Source
DEAD (Asp-Glu-Ala-Asp) box polypeptide 5610784-0.068-0.3496Yes
185GATAD2AGATAD2A
Entrez,  Source
GATA zinc finger domain containing 2A10877-0.070-0.3523Yes
186HDAC6HDAC6
Entrez,  Source
histone deacetylase 610914-0.071-0.3508Yes
187MKI67IPMKI67IP
Entrez,  Source
MKI67 (FHA domain) interacting nucleolar phosphoprotein10951-0.072-0.3492Yes
188CCNHCCNH
Entrez,  Source
cyclin H10973-0.073-0.3464Yes
189CIRH1ACIRH1A
Entrez,  Source
cirrhosis, autosomal recessive 1A (cirhin)11001-0.073-0.3440Yes
190NUFIP1NUFIP1
Entrez,  Source
nuclear fragile X mental retardation protein interacting protein 111003-0.073-0.3396Yes
191NPM1NPM1
Entrez,  Source
nucleophosmin (nucleolar phosphoprotein B23, numatrin)11090-0.075-0.3416Yes
192XPO7XPO7
Entrez,  Source
exportin 711164-0.077-0.3425Yes
193EFTUD2EFTUD2
Entrez,  Source
elongation factor Tu GTP binding domain containing 211170-0.077-0.3382Yes
194MYBBP1AMYBBP1A
Entrez,  Source
MYB binding protein (P160) 1a11212-0.079-0.3365Yes
195RBM39RBM39
Entrez,  Source
RNA binding motif protein 3911305-0.082-0.3386Yes
196RPP40RPP40
Entrez,  Source
ribonuclease P 40kDa subunit11316-0.082-0.3344Yes
197GNL3GNL3
Entrez,  Source
guanine nucleotide binding protein-like 3 (nucleolar)11323-0.082-0.3299Yes
198TEP1TEP1
Entrez,  Source
telomerase-associated protein 111364-0.083-0.3279Yes
199RPA2RPA2
Entrez,  Source
replication protein A2, 32kDa11368-0.083-0.3231Yes
200TFIP11TFIP11
Entrez,  Source
tuftelin interacting protein 1111393-0.084-0.3198Yes
201GUCY2FGUCY2F
Entrez,  Source
guanylate cyclase 2F, retinal11508-0.087-0.3233Yes
202SIP1SIP1
Entrez,  Source
survival of motor neuron protein interacting protein 111513-0.087-0.3183Yes
203LBRLBR
Entrez,  Source
lamin B receptor11547-0.088-0.3155Yes
204BRCA1BRCA1
Entrez,  Source
breast cancer 1, early onset11628-0.090-0.3162Yes
205SF3A3SF3A3
Entrez,  Source
splicing factor 3a, subunit 3, 60kDa11660-0.090-0.3131Yes
206NUP88NUP88
Entrez,  Source
nucleoporin 88kDa11742-0.093-0.3136Yes
207BNIP1BNIP1
Entrez,  Source
BCL2/adenovirus E1B 19kDa interacting protein 111760-0.094-0.3092Yes
208PTBP1PTBP1
Entrez,  Source
polypyrimidine tract binding protein 111792-0.095-0.3058Yes
209NOL5ANOL5A
Entrez,  Source
nucleolar protein 5A (56kDa with KKE/D repeat)11821-0.096-0.3021Yes
210RPL35RPL35
Entrez,  Source
ribosomal protein L3511865-0.098-0.2994Yes
211ACTL6AACTL6A
Entrez,  Source
actin-like 6A11873-0.098-0.2940Yes
212TAF2TAF2
Entrez,  Source
TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa11894-0.099-0.2895Yes
213SP140SP140
Entrez,  Source
SP140 nuclear body protein11896-0.099-0.2836Yes
214FUSIP1FUSIP1
Entrez,  Source
FUS interacting protein (serine/arginine-rich) 111902-0.099-0.2780Yes
215TIMELESSTIMELESS
Entrez,  Source
timeless homolog (Drosophila)11937-0.100-0.2745Yes
216GTF3C1GTF3C1
Entrez,  Source
general transcription factor IIIC, polypeptide 1, alpha 220kDa11971-0.102-0.2708Yes
217CDC23CDC23
Entrez,  Source
CDC23 (cell division cycle 23, yeast, homolog)11974-0.102-0.2648Yes
218KPNB1KPNB1
Entrez,  Source
karyopherin (importin) beta 111995-0.103-0.2601Yes
219HNRPFHNRPF
Entrez,  Source
heterogeneous nuclear ribonucleoprotein F11999-0.103-0.2541Yes
220ISG20ISG20
Entrez,  Source
interferon stimulated exonuclease gene 20kDa12100-0.107-0.2552Yes
221SLC29A2SLC29A2
Entrez,  Source
solute carrier family 29 (nucleoside transporters), member 212103-0.107-0.2489Yes
222NCBP1NCBP1
Entrez,  Source
nuclear cap binding protein subunit 1, 80kDa12122-0.108-0.2437Yes
223MCM7MCM7
Entrez,  Source
MCM7 minichromosome maintenance deficient 7 (S. cerevisiae)12174-0.110-0.2409Yes
224HNRPH1HNRPH1
Entrez,  Source
heterogeneous nuclear ribonucleoprotein H1 (H)12186-0.111-0.2350Yes
225CDKN2ACDKN2A
Entrez,  Source
cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)12189-0.111-0.2284Yes
226PHF12PHF12
Entrez,  Source
PHD finger protein 1212208-0.112-0.2230Yes
227SPTBN4SPTBN4
Entrez,  Source
spectrin, beta, non-erythrocytic 412231-0.113-0.2179Yes
228XPO1XPO1
Entrez,  Source
exportin 1 (CRM1 homolog, yeast)12235-0.113-0.2112Yes
229GTF2H4GTF2H4
Entrez,  Source
general transcription factor IIH, polypeptide 4, 52kDa12316-0.117-0.2103Yes
230RUVBL1RUVBL1
Entrez,  Source
RuvB-like 1 (E. coli)12430-0.123-0.2115Yes
231NOLC1NOLC1
Entrez,  Source
nucleolar and coiled-body phosphoprotein 112447-0.123-0.2052Yes
232RPS19RPS19
Entrez,  Source
ribosomal protein S1912470-0.125-0.1993Yes
233PTGER3PTGER3
Entrez,  Source
prostaglandin E receptor 3 (subtype EP3)12492-0.127-0.1932Yes
234UBTFUBTF
Entrez,  Source
upstream binding transcription factor, RNA polymerase I12542-0.131-0.1890Yes
235ARID1BARID1B
Entrez,  Source
AT rich interactive domain 1B (SWI1-like)12572-0.133-0.1831Yes
236NUP54NUP54
Entrez,  Source
nucleoporin 54kDa12635-0.137-0.1796Yes
237SNUPNSNUPN
Entrez,  Source
snurportin 112641-0.137-0.1716Yes
238LRPPRCLRPPRC
Entrez,  Source
leucine-rich PPR-motif containing12645-0.138-0.1635Yes
239POLR3CPOLR3C
Entrez,  Source
polymerase (RNA) III (DNA directed) polypeptide C (62kD)12669-0.139-0.1569Yes
240SNRPASNRPA
Entrez,  Source
small nuclear ribonucleoprotein polypeptide A12683-0.140-0.1493Yes
241FMR1FMR1
Entrez,  Source
fragile X mental retardation 112694-0.141-0.1415Yes
242TP53TP53
Entrez,  Source
tumor protein p53 (Li-Fraumeni syndrome)12718-0.143-0.1346Yes
243XRCC6XRCC6
Entrez,  Source
X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70kDa)12731-0.144-0.1268Yes
244HES6HES6
Entrez,  Source
hairy and enhancer of split 6 (Drosophila)12756-0.147-0.1197Yes
245MSH3MSH3
Entrez,  Source
mutS homolog 3 (E. coli)12763-0.148-0.1112Yes
246DYRK1ADYRK1A
Entrez,  Source
dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A12862-0.160-0.1090Yes
247TDGTDG
Entrez,  Source
thymine-DNA glycosylase12879-0.162-0.1004Yes
248ASCC3L1ASCC3L1
Entrez,  Source
activating signal cointegrator 1 complex subunit 3-like 112985-0.180-0.0974Yes
249MRE11AMRE11A
Entrez,  Source
MRE11 meiotic recombination 11 homolog A (S. cerevisiae)13022-0.190-0.0887Yes
250SDAD1SDAD1
Entrez,  Source
SDA1 domain containing 113043-0.196-0.0783Yes
251HNRPMHNRPM
Entrez,  Source
heterogeneous nuclear ribonucleoprotein M13047-0.197-0.0666Yes
252NUAK2NUAK2
Entrez,  Source
NUAK family, SNF1-like kinase, 213065-0.201-0.0557Yes
253RB1RB1
Entrez,  Source
retinoblastoma 1 (including osteosarcoma)13067-0.201-0.0436Yes
254SREBF1SREBF1
Entrez,  Source
sterol regulatory element binding transcription factor 113110-0.214-0.0339Yes
255NAP1L3NAP1L3
Entrez,  Source
nucleosome assembly protein 1-like 313164-0.231-0.0239Yes
256APTXAPTX
Entrez,  Source
aprataxin13219-0.270-0.0116Yes
257ARNTLARNTL
Entrez,  Source
aryl hydrocarbon receptor nuclear translocator-like13280-0.3450.0047Yes
Table: GSEA details [plain text format]



Fig 2: NUCLEAR_PART   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: NUCLEAR_PART: Random ES distribution   
Gene set null distribution of ES for NUCLEAR_PART