Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_8d |
| GeneSet | PATTERN_BINDING |
| Enrichment Score (ES) | 0.7145418 |
| Normalized Enrichment Score (NES) | 1.9070375 |
| Nominal p-value | 0.0036832413 |
| FDR q-value | 0.014822515 |
| FWER p-Value | 0.588 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | LPL | LPL Entrez, Source | lipoprotein lipase | 24 | 0.680 | 0.1902 | Yes |
| 2 | FSTL1 | FSTL1 Entrez, Source | follistatin-like 1 | 80 | 0.469 | 0.3184 | Yes |
| 3 | PGLYRP1 | PGLYRP1 Entrez, Source | peptidoglycan recognition protein 1 | 98 | 0.439 | 0.4411 | Yes |
| 4 | TNFAIP6 | TNFAIP6 Entrez, Source | tumor necrosis factor, alpha-induced protein 6 | 117 | 0.402 | 0.5533 | Yes |
| 5 | TGFBR3 | TGFBR3 Entrez, Source | transforming growth factor, beta receptor III (betaglycan, 300kDa) | 577 | 0.168 | 0.5663 | Yes |
| 6 | FGF10 | FGF10 Entrez, Source | fibroblast growth factor 10 | 632 | 0.160 | 0.6074 | Yes |
| 7 | HBEGF | HBEGF Entrez, Source | heparin-binding EGF-like growth factor | 717 | 0.149 | 0.6432 | Yes |
| 8 | PF4 | PF4 Entrez, Source | platelet factor 4 (chemokine (C-X-C motif) ligand 4) | 798 | 0.140 | 0.6767 | Yes |
| 9 | TLR2 | TLR2 Entrez, Source | toll-like receptor 2 | 815 | 0.138 | 0.7145 | Yes |
| 10 | APOA5 | APOA5 Entrez, Source | apolipoprotein A-V | 1344 | 0.102 | 0.7036 | No |
| 11 | FGFBP1 | FGFBP1 Entrez, Source | fibroblast growth factor binding protein 1 | 2072 | 0.071 | 0.6690 | No |
| 12 | CD14 | CD14 Entrez, Source | CD14 molecule | 2182 | 0.068 | 0.6799 | No |
| 13 | SERPINA5 | SERPINA5 Entrez, Source | serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 | 2306 | 0.064 | 0.6889 | No |
| 14 | CHIA | CHIA Entrez, Source | chitinase, acidic | 2728 | 0.054 | 0.6726 | No |
| 15 | THBS4 | THBS4 Entrez, Source | thrombospondin 4 | 2746 | 0.054 | 0.6866 | No |
| 16 | IMPG2 | IMPG2 Entrez, Source | interphotoreceptor matrix proteoglycan 2 | 3469 | 0.039 | 0.6435 | No |
| 17 | STAB2 | STAB2 Entrez, Source | stabilin 2 | 4167 | 0.028 | 0.5990 | No |
| 18 | THBS2 | THBS2 Entrez, Source | thrombospondin 2 | 9270 | -0.041 | 0.2276 | No |
| 19 | HDGF | HDGF Entrez, Source | hepatoma-derived growth factor (high-mobility group protein 1-like) | 9943 | -0.053 | 0.1920 | No |
| 20 | RPL29 | RPL29 Entrez, Source | ribosomal protein L29 | 10090 | -0.055 | 0.1965 | No |
| 21 | MDK | MDK Entrez, Source | midkine (neurite growth-promoting factor 2) | 10954 | -0.072 | 0.1522 | No |
| 22 | LRPAP1 | LRPAP1 Entrez, Source | low density lipoprotein receptor-related protein associated protein 1 | 11802 | -0.096 | 0.1156 | No |
