Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetROS_MOUSE_AORTA_DN
Enrichment Score (ES)0.5413474
Normalized Enrichment Score (NES)1.808284
Nominal p-value0.0
FDR q-value0.030900361
FWER p-Value0.964
Table: GSEA Results Summary



Fig 1: Enrichment plot: ROS_MOUSE_AORTA_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RGS2RGS2
Entrez,  Source
regulator of G-protein signalling 2, 24kDa420.6160.0738Yes
2IL1R2IL1R2
Entrez,  Source
interleukin 1 receptor, type II460.5990.1486Yes
3MGPMGP
Entrez,  Source
matrix Gla protein620.5330.2141Yes
4BGNBGN
Entrez,  Source
biglycan1430.3690.2543Yes
5FXYD5FXYD5
Entrez,  Source
FXYD domain containing ion transport regulator 52170.3090.2875Yes
6ATF3ATF3
Entrez,  Source
activating transcription factor 32180.3090.3262Yes
7GPX3GPX3
Entrez,  Source
glutathione peroxidase 3 (plasma)2860.2560.3531Yes
8CD9CD9
Entrez,  Source
CD9 molecule2990.2500.3836Yes
9CYBACYBA
Entrez,  Source
cytochrome b-245, alpha polypeptide3530.2290.4082Yes
10EMP3EMP3
Entrez,  Source
epithelial membrane protein 33580.2270.4362Yes
11S100A6S100A6
Entrez,  Source
S100 calcium binding protein A64020.2090.4592Yes
12LYZLYZ
Entrez,  Source
lysozyme (renal amyloidosis)4240.2020.4829Yes
13CPECPE
Entrez,  Source
carboxypeptidase E5890.1670.4914Yes
14GNAI2GNAI2
Entrez,  Source
guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 26560.1570.5060Yes
15IL1BIL1B
Entrez,  Source
interleukin 1, beta10140.1210.4942Yes
16GADD45BGADD45B
Entrez,  Source
growth arrest and DNA-damage-inducible, beta10450.1180.5067Yes
17ANXA3ANXA3
Entrez,  Source
annexin A310620.1170.5201Yes
18ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A111830.1100.5249Yes
19ARG2ARG2
Entrez,  Source
arginase, type II12510.1070.5332Yes
20ARG1ARG1
Entrez,  Source
arginase, liver13160.1030.5413Yes
21ALAS2ALAS2
Entrez,  Source
aminolevulinate, delta-, synthase 2 (sideroblastic/hypochromic anemia)21000.0700.4911No
22CD14CD14
Entrez,  Source
CD14 molecule21820.0680.4935No
23SYN1SYN1
Entrez,  Source
synapsin I24570.0610.4805No
24IGFBP5IGFBP5
Entrez,  Source
insulin-like growth factor binding protein 527130.0550.4682No
25SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 230410.0480.4495No
26CLUCLU
Entrez,  Source
clusterin32990.0430.4355No
27PMP22PMP22
Entrez,  Source
peripheral myelin protein 2234640.0390.4281No
28BTG3BTG3
Entrez,  Source
BTG family, member 343870.0240.3617No
29SERPING1SERPING1
Entrez,  Source
serpin peptidase inhibitor, clade G (C1 inhibitor), member 1, (angioedema, hereditary)45470.0220.3524No
30ACTBACTB
Entrez,  Source
actin, beta47140.0190.3424No
31HIF1AHIF1A
Entrez,  Source
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)48920.0170.3312No
32MYH11MYH11
Entrez,  Source
myosin, heavy chain 11, smooth muscle48990.0170.3328No
33DSTNDSTN
Entrez,  Source
destrin (actin depolymerizing factor)50070.0150.3267No
34CAPZBCAPZB
Entrez,  Source
capping protein (actin filament) muscle Z-line, beta56460.0060.2794No
35ENAHENAH
Entrez,  Source
enabled homolog (Drosophila)57120.0060.2752No
36TPM1TPM1
Entrez,  Source
tropomyosin 1 (alpha)59260.0030.2596No
37ARL6IP2ARL6IP2
Entrez,  Source
ADP-ribosylation factor-like 6 interacting protein 26495-0.0040.2174No
38RCN2RCN2
Entrez,  Source
reticulocalbin 2, EF-hand calcium binding domain6889-0.0090.1890No
39PTPN23PTPN23
Entrez,  Source
protein tyrosine phosphatase, non-receptor type 237312-0.0140.1590No
40HDCHDC
Entrez,  Source
histidine decarboxylase7531-0.0170.1447No
41BHLHB2BHLHB2
Entrez,  Source
basic helix-loop-helix domain containing, class B, 27852-0.0210.1233No
42SLC25A1SLC25A1
Entrez,  Source
solute carrier family 25 (mitochondrial carrier; citrate transporter), member 18088-0.0250.1087No
43ELNELN
Entrez,  Source
elastin (supravalvular aortic stenosis, Williams-Beuren syndrome)8687-0.0330.0679No
44PTGISPTGIS
Entrez,  Source
prostaglandin I2 (prostacyclin) synthase9012-0.0380.0483No
45RPL18RPL18
Entrez,  Source
ribosomal protein L1810558-0.063-0.0601No
46S100A9S100A9
Entrez,  Source
S100 calcium binding protein A910706-0.066-0.0629No
47EXOSC7EXOSC7
Entrez,  Source
exosome component 710861-0.070-0.0657No
48RPS5RPS5
Entrez,  Source
ribosomal protein S511241-0.080-0.0842No
49CTSSCTSS
Entrez,  Source
cathepsin S12022-0.104-0.1300No
50LCP1LCP1
Entrez,  Source
lymphocyte cytosolic protein 1 (L-plastin)12229-0.113-0.1314No
51CSRP1CSRP1
Entrez,  Source
cysteine and glycine-rich protein 112583-0.134-0.1412No
52MMP9MMP9
Entrez,  Source
matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)12642-0.137-0.1284No
53RBP1RBP1
Entrez,  Source
retinol binding protein 1, cellular12674-0.139-0.1134No
54PON1PON1
Entrez,  Source
paraoxonase 113297-0.394-0.1109No
55CD5LCD5L
Entrez,  Source
CD5 molecule-like13339-0.9130.0002No
Table: GSEA details [plain text format]



Fig 2: ROS_MOUSE_AORTA_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ROS_MOUSE_AORTA_DN: Random ES distribution   
Gene set null distribution of ES for ROS_MOUSE_AORTA_DN