Details for gene set SANA_TNFA_ENDOTHELIAL

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	SANA_TNFA_ENDOTHELIAL_DN
Enrichment Score (ES)	0.5660287
Normalized Enrichment Score (NES)	1.8660412
Nominal p-value	0.0
FDR q-value	0.021233626
FWER p-Value	0.797

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	ANXA1	ANXA1 Entrez, Source	annexin A1	10	0.815	0.1427	Yes
2	CTGF	CTGF Entrez, Source	connective tissue growth factor	32	0.660	0.2572	Yes
3	BGN	BGN Entrez, Source	biglycan	143	0.369	0.3139	Yes
4	RGS4	RGS4 Entrez, Source	regulator of G-protein signalling 4	219	0.308	0.3625	Yes
5	PEA15	PEA15 Entrez, Source	phosphoprotein enriched in astrocytes 15	252	0.281	0.4095	Yes
6	DDR1	DDR1 Entrez, Source	discoidin domain receptor family, member 1	257	0.276	0.4578	Yes
7	DNAJB4	DNAJB4 Entrez, Source	DnaJ (Hsp40) homolog, subfamily B, member 4	278	0.263	0.5025	Yes
8	TMSB4X	TMSB4X Entrez, Source	thymosin, beta 4, X-linked	427	0.202	0.5269	Yes
9	PHLDA1	PHLDA1 Entrez, Source	pleckstrin homology-like domain, family A, member 1	772	0.143	0.5261	Yes
10	SDPR	SDPR Entrez, Source	serum deprivation response (phosphatidylserine binding protein)	851	0.134	0.5438	Yes
11	PALMD	PALMD Entrez, Source	palmdelphin	958	0.125	0.5577	Yes
12	ALDH1A1	ALDH1A1 Entrez, Source	aldehyde dehydrogenase 1 family, member A1	1183	0.110	0.5603	Yes
13	EPAS1	EPAS1 Entrez, Source	endothelial PAS domain protein 1	1345	0.102	0.5660	Yes
14	ANXA2	ANXA2 Entrez, Source	annexin A2	1825	0.079	0.5439	No
15	KCNH2	KCNH2 Entrez, Source	potassium voltage-gated channel, subfamily H (eag-related), member 2	2139	0.069	0.5325	No
16	ARL6IP1	ARL6IP1 Entrez, Source	ADP-ribosylation factor-like 6 interacting protein 1	2527	0.059	0.5137	No
17	PGAM2	PGAM2 Entrez, Source	phosphoglycerate mutase 2 (muscle)	2529	0.059	0.5240	No
18	ARL5A	ARL5A Entrez, Source	ADP-ribosylation factor-like 5A	3002	0.048	0.4970	No
19	NFIB	NFIB Entrez, Source	nuclear factor I/B	3057	0.047	0.5013	No
20	CLU	CLU Entrez, Source	clusterin	3299	0.043	0.4907	No
21	DNAH11	DNAH11 Entrez, Source	dynein, axonemal, heavy chain 11	3784	0.034	0.4602	No
22	CCNA1	CCNA1 Entrez, Source	cyclin A1	3861	0.032	0.4601	No
23	TXNIP	TXNIP Entrez, Source	thioredoxin interacting protein	3975	0.031	0.4570	No
24	CAPNS1	CAPNS1 Entrez, Source	calpain, small subunit 1	4237	0.026	0.4420	No
25	KDR	KDR Entrez, Source	kinase insert domain receptor (a type III receptor tyrosine kinase)	4694	0.020	0.4112	No
26	ARHGDIB	ARHGDIB Entrez, Source	Rho GDP dissociation inhibitor (GDI) beta	5075	0.014	0.3851	No
27	JAG2	JAG2 Entrez, Source	jagged 2	5167	0.013	0.3805	No
28	APLN	APLN Entrez, Source	apelin, AGTRL1 ligand	5207	0.013	0.3798	No
29	HTR1B	HTR1B Entrez, Source	5-hydroxytryptamine (serotonin) receptor 1B	5221	0.012	0.3810	No
30	GBA2	GBA2 Entrez, Source	glucosidase, beta (bile acid) 2	5457	0.009	0.3649	No
31	PCTP	PCTP Entrez, Source	phosphatidylcholine transfer protein	5573	0.007	0.3575	No
32	ACE	ACE Entrez, Source	angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	6152	-0.000	0.3140	No
33	ATP1B3	ATP1B3 Entrez, Source	ATPase, Na+/K+ transporting, beta 3 polypeptide	6301	-0.002	0.3032	No
34	SMYD2	SMYD2 Entrez, Source	SET and MYND domain containing 2	6438	-0.004	0.2936	No
35	EMCN	EMCN Entrez, Source	endomucin	6694	-0.007	0.2757	No
36	ITGA6	ITGA6 Entrez, Source	integrin, alpha 6	6967	-0.010	0.2570	No
37	CALCRL	CALCRL Entrez, Source	calcitonin receptor-like	7260	-0.014	0.2375	No
38	MTUS1	MTUS1 Entrez, Source	mitochondrial tumor suppressor 1	7445	-0.016	0.2264	No
39	ANTXR1	ANTXR1 Entrez, Source	anthrax toxin receptor 1	7540	-0.017	0.2224	No
40	RHOJ	RHOJ Entrez, Source	ras homolog gene family, member J	8240	-0.027	0.1745	No
41	PRKCH	PRKCH Entrez, Source	protein kinase C, eta	8644	-0.033	0.1500	No
42	TPT1	TPT1 Entrez, Source	tumor protein, translationally-controlled 1	8697	-0.034	0.1520	No
43	NQO1	NQO1 Entrez, Source	NAD(P)H dehydrogenase, quinone 1	9220	-0.040	0.1198	No
44	VWF	VWF Entrez, Source	von Willebrand factor	9242	-0.041	0.1254	No
45	ATP5A1	ATP5A1 Entrez, Source	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	9290	-0.042	0.1292	No
46	TGM2	TGM2 Entrez, Source	transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)	9694	-0.049	0.1074	No
47	FHL2	FHL2 Entrez, Source	four and a half LIM domains 2	9790	-0.050	0.1091	No
48	PDLIM4	PDLIM4 Entrez, Source	PDZ and LIM domain 4	10146	-0.056	0.0922	No
49	RPS3A	RPS3A Entrez, Source	ribosomal protein S3A	10285	-0.058	0.0920	No
50	HDAC2	HDAC2 Entrez, Source	histone deacetylase 2	10765	-0.068	0.0679	No
51	NT5E	NT5E Entrez, Source	5'-nucleotidase, ecto (CD73)	11299	-0.081	0.0421	No
52	SFRS7	SFRS7 Entrez, Source	splicing factor, arginine/serine-rich 7, 35kDa	11343	-0.083	0.0534	No
53	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	12182	-0.111	0.0098	No
54	IGFBP4	IGFBP4 Entrez, Source	insulin-like growth factor binding protein 4	12663	-0.138	-0.0020	No
55	CRIP2	CRIP2 Entrez, Source	cysteine-rich protein 2	13251	-0.301	0.0068	No