Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | SHEPARD_BMYB_MORPHOLINO_UP |
Enrichment Score (ES) | 0.5051824 |
Normalized Enrichment Score (NES) | 1.7684722 |
Nominal p-value | 0.0 |
FDR q-value | 0.03703035 |
FWER p-Value | 0.996 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | TIMP2 | TIMP2 Entrez,  Source | TIMP metallopeptidase inhibitor 2 | 35 | 0.642 | 0.0671 | Yes |
2 | PCK1 | PCK1 Entrez,  Source | phosphoenolpyruvate carboxykinase 1 (soluble) | 59 | 0.557 | 0.1258 | Yes |
3 | BMP2 | BMP2 Entrez,  Source | bone morphogenetic protein 2 | 91 | 0.451 | 0.1725 | Yes |
4 | FST | FST Entrez,  Source | follistatin | 132 | 0.388 | 0.2116 | Yes |
5 | FOS | FOS Entrez,  Source | v-fos FBJ murine osteosarcoma viral oncogene homolog | 142 | 0.371 | 0.2511 | Yes |
6 | BGN | BGN Entrez,  Source | biglycan | 143 | 0.369 | 0.2912 | Yes |
7 | FBXO32 | FBXO32 Entrez,  Source | F-box protein 32 | 206 | 0.318 | 0.3211 | Yes |
8 | HSD3B1 | HSD3B1 Entrez,  Source | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 | 229 | 0.299 | 0.3519 | Yes |
9 | DNAJB4 | DNAJB4 Entrez,  Source | DnaJ (Hsp40) homolog, subfamily B, member 4 | 278 | 0.263 | 0.3768 | Yes |
10 | HNRPD | HNRPD Entrez,  Source | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | 389 | 0.213 | 0.3916 | Yes |
11 | IGF2 | IGF2 Entrez,  Source | insulin-like growth factor 2 (somatomedin A) | 480 | 0.186 | 0.4050 | Yes |
12 | RAB3C | RAB3C Entrez,  Source | RAB3C, member RAS oncogene family | 549 | 0.172 | 0.4186 | Yes |
13 | SCARB1 | SCARB1 Entrez,  Source | scavenger receptor class B, member 1 | 562 | 0.171 | 0.4362 | Yes |
14 | FABP1 | FABP1 Entrez,  Source | fatty acid binding protein 1, liver | 616 | 0.163 | 0.4499 | Yes |
15 | HSBP1 | HSBP1 Entrez,  Source | heat shock factor binding protein 1 | 877 | 0.131 | 0.4446 | Yes |
16 | HSPB1 | HSPB1 Entrez,  Source | heat shock 27kDa protein 1 | 1084 | 0.116 | 0.4416 | Yes |
17 | RASL11B | RASL11B Entrez,  Source | RAS-like, family 11, member B | 1232 | 0.108 | 0.4422 | Yes |
18 | ABCC5 | ABCC5 Entrez,  Source | ATP-binding cassette, sub-family C (CFTR/MRP), member 5 | 1263 | 0.106 | 0.4515 | Yes |
19 | ARG1 | ARG1 Entrez,  Source | arginase, liver | 1316 | 0.103 | 0.4588 | Yes |
20 | DLGAP4 | DLGAP4 Entrez,  Source | discs, large (Drosophila) homolog-associated protein 4 | 1317 | 0.103 | 0.4700 | Yes |
21 | CAMK1G | CAMK1G Entrez,  Source | calcium/calmodulin-dependent protein kinase IG | 1330 | 0.102 | 0.4802 | Yes |
22 | HFE | HFE Entrez,  Source | hemochromatosis | 1400 | 0.099 | 0.4857 | Yes |
23 | LAMP2 | LAMP2 Entrez,  Source | lysosomal-associated membrane protein 2 | 1467 | 0.095 | 0.4911 | Yes |
24 | EFHD2 | EFHD2 Entrez,  Source | EF-hand domain family, member D2 | 1751 | 0.083 | 0.4787 | Yes |
25 | SLC16A6 | SLC16A6 Entrez,  Source | solute carrier family 16, member 6 (monocarboxylic acid transporter 7) | 1775 | 0.081 | 0.4858 | Yes |
26 | GNAI3 | GNAI3 Entrez,  Source | guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3 | 1790 | 0.081 | 0.4935 | Yes |
27 | ANXA2 | ANXA2 Entrez,  Source | annexin A2 | 1825 | 0.079 | 0.4995 | Yes |
28 | BNIP3L | BNIP3L Entrez,  Source | BCL2/adenovirus E1B 19kDa interacting protein 3-like | 1863 | 0.078 | 0.5052 | Yes |
29 | RDH10 | RDH10 Entrez,  Source | retinol dehydrogenase 10 (all-trans) | 2407 | 0.062 | 0.4709 | No |
30 | WNT11 | WNT11 Entrez,  Source | wingless-type MMTV integration site family, member 11 | 2454 | 0.061 | 0.4740 | No |
31 | GPC4 | GPC4 Entrez,  Source | glypican 4 | 2553 | 0.058 | 0.4730 | No |
32 | CRABP2 | CRABP2 Entrez,  Source | cellular retinoic acid binding protein 2 | 2566 | 0.058 | 0.4784 | No |
33 | GMPR | GMPR Entrez,  Source | guanosine monophosphate reductase | 2611 | 0.057 | 0.4813 | No |
34 | CASP8 | CASP8 Entrez,  Source | caspase 8, apoptosis-related cysteine peptidase | 2697 | 0.055 | 0.4809 | No |
35 | GLUD1 | GLUD1 Entrez,  Source | glutamate dehydrogenase 1 | 2843 | 0.052 | 0.4756 | No |
36 | PAPOLB | PAPOLB Entrez,  Source | poly(A) polymerase beta (testis specific) | 3257 | 0.044 | 0.4491 | No |
37 | SQSTM1 | SQSTM1 Entrez,  Source | sequestosome 1 | 3270 | 0.043 | 0.4529 | No |
38 | ATP6V1C2 | ATP6V1C2 Entrez,  Source | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 | 3316 | 0.042 | 0.4541 | No |
39 | EIF4E | EIF4E Entrez,  Source | eukaryotic translation initiation factor 4E | 3538 | 0.038 | 0.4415 | No |
40 | SH3GLB2 | SH3GLB2 Entrez,  Source | SH3-domain GRB2-like endophilin B2 | 3621 | 0.037 | 0.4393 | No |
41 | PTP4A2 | PTP4A2 Entrez,  Source | protein tyrosine phosphatase type IVA, member 2 | 3971 | 0.031 | 0.4163 | No |
42 | MMP2 | MMP2 Entrez,  Source | matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) | 3978 | 0.031 | 0.4192 | No |
43 | GNS | GNS Entrez,  Source | glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID) | 4298 | 0.025 | 0.3979 | No |
44 | ATP1A1 | ATP1A1 Entrez,  Source | ATPase, Na+/K+ transporting, alpha 1 polypeptide | 4640 | 0.020 | 0.3743 | No |
45 | AK3 | AK3 Entrez,  Source | adenylate kinase 3 | 4820 | 0.018 | 0.3628 | No |
46 | CYP26B1 | CYP26B1 Entrez,  Source | cytochrome P450, family 26, subfamily B, polypeptide 1 | 4879 | 0.017 | 0.3602 | No |
47 | B2M | B2M Entrez,  Source | beta-2-microglobulin | 4992 | 0.015 | 0.3534 | No |
48 | SOCS3 | SOCS3 Entrez,  Source | suppressor of cytokine signaling 3 | 5260 | 0.012 | 0.3346 | No |
49 | VDAC3 | VDAC3 Entrez,  Source | voltage-dependent anion channel 3 | 5311 | 0.011 | 0.3320 | No |
50 | SYBL1 | SYBL1 Entrez,  Source | synaptobrevin-like 1 | 5485 | 0.009 | 0.3199 | No |
51 | FNTB | FNTB Entrez,  Source | farnesyltransferase, CAAX box, beta | 5590 | 0.007 | 0.3128 | No |
52 | IFI30 | IFI30 Entrez,  Source | interferon, gamma-inducible protein 30 | 6191 | -0.000 | 0.2676 | No |
53 | TMPO | TMPO Entrez,  Source | thymopoietin | 6281 | -0.002 | 0.2610 | No |
54 | DNAJA2 | DNAJA2 Entrez,  Source | DnaJ (Hsp40) homolog, subfamily A, member 2 | 6450 | -0.004 | 0.2488 | No |
55 | HMGA1 | HMGA1 Entrez,  Source | high mobility group AT-hook 1 | 6574 | -0.005 | 0.2401 | No |
56 | HPGD | HPGD Entrez,  Source | hydroxyprostaglandin dehydrogenase 15-(NAD) | 6866 | -0.009 | 0.2191 | No |
57 | PRDX1 | PRDX1 Entrez,  Source | peroxiredoxin 1 | 6870 | -0.009 | 0.2198 | No |
58 | ITM2B | ITM2B Entrez,  Source | integral membrane protein 2B | 7038 | -0.011 | 0.2084 | No |
59 | PNPO | PNPO Entrez,  Source | pyridoxamine 5'-phosphate oxidase | 7051 | -0.011 | 0.2088 | No |
60 | NAPE-PLD | NAPE-PLD Entrez,  Source | - | 7278 | -0.014 | 0.1932 | No |
61 | CYP11A1 | CYP11A1 Entrez,  Source | cytochrome P450, family 11, subfamily A, polypeptide 1 | 7492 | -0.017 | 0.1789 | No |
62 | CUBN | CUBN Entrez,  Source | cubilin (intrinsic factor-cobalamin receptor) | 7631 | -0.019 | 0.1705 | No |
63 | PSMD3 | PSMD3 Entrez,  Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 3 | 7666 | -0.019 | 0.1700 | No |
64 | PDC | PDC Entrez,  Source | phosducin | 8071 | -0.025 | 0.1422 | No |
65 | CCNG1 | CCNG1 Entrez,  Source | cyclin G1 | 8130 | -0.026 | 0.1406 | No |
66 | BAX | BAX Entrez,  Source | BCL2-associated X protein | 8544 | -0.031 | 0.1129 | No |
67 | QKI | QKI Entrez,  Source | quaking homolog, KH domain RNA binding (mouse) | 8721 | -0.034 | 0.1032 | No |
68 | GCSH | GCSH Entrez,  Source | glycine cleavage system protein H (aminomethyl carrier) | 8961 | -0.037 | 0.0892 | No |
69 | HSPA2 | HSPA2 Entrez,  Source | heat shock 70kDa protein 2 | 9062 | -0.038 | 0.0859 | No |
70 | TPD52L2 | TPD52L2 Entrez,  Source | tumor protein D52-like 2 | 9479 | -0.045 | 0.0593 | No |
71 | MRPL19 | MRPL19 Entrez,  Source | mitochondrial ribosomal protein L19 | 10051 | -0.054 | 0.0221 | No |
72 | STIP1 | STIP1 Entrez,  Source | stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein) | 10313 | -0.059 | 0.0088 | No |
73 | MRPS18B | MRPS18B Entrez,  Source | mitochondrial ribosomal protein S18B | 10423 | -0.061 | 0.0072 | No |
74 | OSGEPL1 | OSGEPL1 Entrez,  Source | O-sialoglycoprotein endopeptidase-like 1 | 10611 | -0.065 | 0.0001 | No |
75 | HNF4A | HNF4A Entrez,  Source | hepatocyte nuclear factor 4, alpha | 10940 | -0.072 | -0.0169 | No |
76 | SSB | SSB Entrez,  Source | Sjogren syndrome antigen B (autoantigen La) | 10994 | -0.073 | -0.0130 | No |
77 | MINA | MINA Entrez,  Source | MYC induced nuclear antigen | 11107 | -0.076 | -0.0132 | No |
78 | WHSC2 | WHSC2 Entrez,  Source | Wolf-Hirschhorn syndrome candidate 2 | 11144 | -0.077 | -0.0075 | No |
79 | SNX27 | SNX27 Entrez,  Source | sorting nexin family member 27 | 11199 | -0.078 | -0.0031 | No |
80 | NUDT9 | NUDT9 Entrez,  Source | nudix (nucleoside diphosphate linked moiety X)-type motif 9 | 11254 | -0.080 | 0.0015 | No |
81 | RPS27 | RPS27 Entrez,  Source | ribosomal protein S27 (metallopanstimulin 1) | 11258 | -0.080 | 0.0100 | No |
82 | PTPRN | PTPRN Entrez,  Source | protein tyrosine phosphatase, receptor type, N | 11537 | -0.088 | -0.0015 | No |
83 | SND1 | SND1 Entrez,  Source | - | 11565 | -0.088 | 0.0061 | No |
84 | PLAA | PLAA Entrez,  Source | phospholipase A2-activating protein | 11631 | -0.090 | 0.0109 | No |
85 | MBP | MBP Entrez,  Source | myelin basic protein | 11862 | -0.098 | 0.0042 | No |
86 | UPB1 | UPB1 Entrez,  Source | ureidopropionase, beta | 12035 | -0.104 | 0.0025 | No |
87 | DNAJA3 | DNAJA3 Entrez,  Source | DnaJ (Hsp40) homolog, subfamily A, member 3 | 12143 | -0.109 | 0.0063 | No |
88 | PSME1 | PSME1 Entrez,  Source | proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) | 12165 | -0.110 | 0.0166 | No |
89 | SLC31A1 | SLC31A1 Entrez,  Source | solute carrier family 31 (copper transporters), member 1 | 12252 | -0.114 | 0.0225 | No |
90 | KNS2 | KNS2 Entrez,  Source | kinesin 2 | 12449 | -0.123 | 0.0211 | No |
91 | ABAT | ABAT Entrez,  Source | 4-aminobutyrate aminotransferase | 12552 | -0.132 | 0.0277 | No |
92 | TP53 | TP53 Entrez,  Source | tumor protein p53 (Li-Fraumeni syndrome) | 12718 | -0.143 | 0.0308 | No |
93 | CPN1 | CPN1 Entrez,  Source | carboxypeptidase N, polypeptide 1, 50kD | 12773 | -0.149 | 0.0429 | No |