Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
Upregulated in class | double_gel_8d |
GeneSet | V$AP1_C |
Enrichment Score (ES) | 0.47291303 |
Normalized Enrichment Score (NES) | 1.776668 |
Nominal p-value | 0.0 |
FDR q-value | 0.035803013 |
FWER p-Value | 0.993 |
PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|
1 | LAMC2 | LAMC2 Entrez,  Source | laminin, gamma 2 | 14 | 0.770 | 0.0654 | Yes |
2 | PROCR | PROCR Entrez,  Source | protein C receptor, endothelial (EPCR) | 26 | 0.669 | 0.1223 | Yes |
3 | RGS2 | RGS2 Entrez,  Source | regulator of G-protein signalling 2, 24kDa | 42 | 0.616 | 0.1743 | Yes |
4 | EMP1 | EMP1 Entrez,  Source | epithelial membrane protein 1 | 44 | 0.606 | 0.2266 | Yes |
5 | FSTL1 | FSTL1 Entrez,  Source | follistatin-like 1 | 80 | 0.469 | 0.2644 | Yes |
6 | MYBPH | MYBPH Entrez,  Source | myosin binding protein H | 124 | 0.396 | 0.2953 | Yes |
7 | HS3ST2 | HS3ST2 Entrez,  Source | heparan sulfate (glucosamine) 3-O-sulfotransferase 2 | 129 | 0.391 | 0.3287 | Yes |
8 | GJA1 | GJA1 Entrez,  Source | gap junction protein, alpha 1, 43kDa (connexin 43) | 196 | 0.324 | 0.3517 | Yes |
9 | LAMC1 | LAMC1 Entrez,  Source | laminin, gamma 1 (formerly LAMB2) | 224 | 0.303 | 0.3758 | Yes |
10 | PEA15 | PEA15 Entrez,  Source | phosphoprotein enriched in astrocytes 15 | 252 | 0.281 | 0.3980 | Yes |
11 | CLIC1 | CLIC1 Entrez,  Source | chloride intracellular channel 1 | 463 | 0.192 | 0.3987 | Yes |
12 | RBP4 | RBP4 Entrez,  Source | retinol binding protein 4, plasma | 554 | 0.172 | 0.4067 | Yes |
13 | FABP4 | FABP4 Entrez,  Source | fatty acid binding protein 4, adipocyte | 638 | 0.159 | 0.4141 | Yes |
14 | RHBDF1 | RHBDF1 Entrez,  Source | rhomboid 5 homolog 1 (Drosophila) | 661 | 0.156 | 0.4260 | Yes |
15 | CSF3 | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 685 | 0.152 | 0.4373 | Yes |
16 | USP2 | USP2 Entrez,  Source | ubiquitin specific peptidase 2 | 694 | 0.151 | 0.4497 | Yes |
17 | PPP2CA | PPP2CA Entrez,  Source | protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform | 802 | 0.139 | 0.4537 | Yes |
18 | FGF9 | FGF9 Entrez,  Source | fibroblast growth factor 9 (glia-activating factor) | 921 | 0.127 | 0.4557 | Yes |
19 | HSPB6 | HSPB6 Entrez,  Source | heat shock protein, alpha-crystallin-related, B6 | 1106 | 0.114 | 0.4517 | Yes |
20 | NEFH | NEFH Entrez,  Source | neurofilament, heavy polypeptide 200kDa | 1147 | 0.112 | 0.4583 | Yes |
21 | CMAS | CMAS Entrez,  Source | cytidine monophosphate N-acetylneuraminic acid synthetase | 1218 | 0.109 | 0.4624 | Yes |
22 | SV2B | SV2B Entrez,  Source | synaptic vesicle glycoprotein 2B | 1281 | 0.105 | 0.4668 | Yes |
23 | IL10 | IL10 Entrez,  Source | interleukin 10 | 1329 | 0.102 | 0.4721 | Yes |
24 | ROM1 | ROM1 Entrez,  Source | retinal outer segment membrane protein 1 | 1429 | 0.097 | 0.4729 | Yes |
25 | SERPINB5 | SERPINB5 Entrez,  Source | serpin peptidase inhibitor, clade B (ovalbumin), member 5 | 1661 | 0.086 | 0.4629 | No |
26 | ROCK2 | ROCK2 Entrez,  Source | Rho-associated, coiled-coil containing protein kinase 2 | 1731 | 0.083 | 0.4648 | No |
27 | SLC16A6 | SLC16A6 Entrez,  Source | solute carrier family 16, member 6 (monocarboxylic acid transporter 7) | 1775 | 0.081 | 0.4686 | No |
28 | PLCD1 | PLCD1 Entrez,  Source | phospholipase C, delta 1 | 1899 | 0.077 | 0.4659 | No |
29 | FGF11 | FGF11 Entrez,  Source | fibroblast growth factor 11 | 2695 | 0.055 | 0.4105 | No |
30 | RIN1 | RIN1 Entrez,  Source | Ras and Rab interactor 1 | 2778 | 0.053 | 0.4089 | No |
31 | ITPKC | ITPKC Entrez,  Source | inositol 1,4,5-trisphosphate 3-kinase C | 2807 | 0.053 | 0.4113 | No |
32 | PDGFRB | PDGFRB Entrez,  Source | platelet-derived growth factor receptor, beta polypeptide | 2871 | 0.051 | 0.4110 | No |
33 | XYLT1 | XYLT1 Entrez,  Source | xylosyltransferase I | 3025 | 0.048 | 0.4036 | No |
34 | CLSTN3 | CLSTN3 Entrez,  Source | calsyntenin 3 | 3051 | 0.047 | 0.4058 | No |
35 | LTBP3 | LTBP3 Entrez,  Source | latent transforming growth factor beta binding protein 3 | 3217 | 0.044 | 0.3971 | No |
36 | ATP6V1C2 | ATP6V1C2 Entrez,  Source | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 | 3316 | 0.042 | 0.3933 | No |
37 | GDNF | GDNF Entrez,  Source | glial cell derived neurotrophic factor | 3413 | 0.040 | 0.3895 | No |
38 | SFTPC | SFTPC Entrez,  Source | surfactant, pulmonary-associated protein C | 3512 | 0.038 | 0.3854 | No |
39 | PPP1R9B | PPP1R9B Entrez,  Source | protein phosphatase 1, regulatory subunit 9B, spinophilin | 3726 | 0.035 | 0.3723 | No |
40 | RBBP7 | RBBP7 Entrez,  Source | retinoblastoma binding protein 7 | 3793 | 0.034 | 0.3702 | No |
41 | SNX10 | SNX10 Entrez,  Source | sorting nexin 10 | 3945 | 0.031 | 0.3615 | No |
42 | PSMD1 | PSMD1 Entrez,  Source | proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 | 4043 | 0.030 | 0.3567 | No |
43 | ADAM15 | ADAM15 Entrez,  Source | ADAM metallopeptidase domain 15 (metargidin) | 4045 | 0.030 | 0.3591 | No |
44 | SDCBP | SDCBP Entrez,  Source | syndecan binding protein (syntenin) | 4064 | 0.029 | 0.3603 | No |
45 | PPP2CB | PPP2CB Entrez,  Source | protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform | 4166 | 0.028 | 0.3550 | No |
46 | MAPRE3 | MAPRE3 Entrez,  Source | microtubule-associated protein, RP/EB family, member 3 | 4181 | 0.027 | 0.3564 | No |
47 | BTG3 | BTG3 Entrez,  Source | BTG family, member 3 | 4387 | 0.024 | 0.3429 | No |
48 | SNCG | SNCG Entrez,  Source | synuclein, gamma (breast cancer-specific protein 1) | 4482 | 0.023 | 0.3377 | No |
49 | HSPB7 | HSPB7 Entrez,  Source | heat shock 27kDa protein family, member 7 (cardiovascular) | 4557 | 0.022 | 0.3340 | No |
50 | BLR1 | BLR1 Entrez,  Source | Burkitt lymphoma receptor 1, GTP binding protein (chemokine (C-X-C motif) receptor 5) | 4764 | 0.019 | 0.3200 | No |
51 | CNTF | CNTF Entrez,  Source | ciliary neurotrophic factor | 4782 | 0.018 | 0.3203 | No |
52 | ATP1B1 | ATP1B1 Entrez,  Source | ATPase, Na+/K+ transporting, beta 1 polypeptide | 4788 | 0.018 | 0.3216 | No |
53 | DSCR1L1 | DSCR1L1 Entrez,  Source | Down syndrome critical region gene 1-like 1 | 4800 | 0.018 | 0.3223 | No |
54 | FIGF | FIGF Entrez,  Source | c-fos induced growth factor (vascular endothelial growth factor D) | 4855 | 0.017 | 0.3197 | No |
55 | COL16A1 | COL16A1 Entrez,  Source | collagen, type XVI, alpha 1 | 5051 | 0.015 | 0.3062 | No |
56 | TRAPPC3 | TRAPPC3 Entrez,  Source | trafficking protein particle complex 3 | 5182 | 0.013 | 0.2975 | No |
57 | IVL | IVL Entrez,  Source | involucrin | 5342 | 0.011 | 0.2864 | No |
58 | ESRRG | ESRRG Entrez,  Source | estrogen-related receptor gamma | 5378 | 0.010 | 0.2846 | No |
59 | CAPN6 | CAPN6 Entrez,  Source | calpain 6 | 5480 | 0.009 | 0.2777 | No |
60 | LENEP | LENEP Entrez,  Source | lens epithelial protein | 5564 | 0.007 | 0.2720 | No |
61 | MAP1A | MAP1A Entrez,  Source | microtubule-associated protein 1A | 5715 | 0.005 | 0.2612 | No |
62 | GADD45A | GADD45A Entrez,  Source | growth arrest and DNA-damage-inducible, alpha | 5788 | 0.005 | 0.2561 | No |
63 | LMNA | LMNA Entrez,  Source | lamin A/C | 5805 | 0.004 | 0.2553 | No |
64 | RNF34 | RNF34 Entrez,  Source | ring finger protein 34 | 6009 | 0.002 | 0.2401 | No |
65 | KCNH6 | KCNH6 Entrez,  Source | potassium voltage-gated channel, subfamily H (eag-related), member 6 | 6020 | 0.002 | 0.2395 | No |
66 | FBXO2 | FBXO2 Entrez,  Source | F-box protein 2 | 6030 | 0.002 | 0.2390 | No |
67 | AQP5 | AQP5 Entrez,  Source | aquaporin 5 | 6038 | 0.002 | 0.2386 | No |
68 | PTPRR | PTPRR Entrez,  Source | protein tyrosine phosphatase, receptor type, R | 6102 | 0.001 | 0.2339 | No |
69 | FLNC | FLNC Entrez,  Source | filamin C, gamma (actin binding protein 280) | 6220 | -0.001 | 0.2251 | No |
70 | RELA | RELA Entrez,  Source | v-rel reticuloendotheliosis viral oncogene homolog A, nuclear factor of kappa light polypeptide gene enhancer in B-cells 3, p65 (avian) | 6260 | -0.001 | 0.2223 | No |
71 | LAMA3 | LAMA3 Entrez,  Source | laminin, alpha 3 | 6404 | -0.003 | 0.2117 | No |
72 | NOTCH4 | NOTCH4 Entrez,  Source | Notch homolog 4 (Drosophila) | 6512 | -0.005 | 0.2040 | No |
73 | OMG | OMG Entrez,  Source | oligodendrocyte myelin glycoprotein | 6563 | -0.005 | 0.2007 | No |
74 | RAB3D | RAB3D Entrez,  Source | RAB3D, member RAS oncogene family | 6624 | -0.006 | 0.1967 | No |
75 | RTN3 | RTN3 Entrez,  Source | reticulon 3 | 6650 | -0.006 | 0.1953 | No |
76 | VAPA | VAPA Entrez,  Source | VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa | 6685 | -0.007 | 0.1934 | No |
77 | SYTL1 | SYTL1 Entrez,  Source | synaptotagmin-like 1 | 6803 | -0.008 | 0.1852 | No |
78 | ADCK4 | ADCK4 Entrez,  Source | aarF domain containing kinase 4 | 6862 | -0.009 | 0.1816 | No |
79 | SLC35B1 | SLC35B1 Entrez,  Source | solute carrier family 35, member B1 | 6890 | -0.009 | 0.1803 | No |
80 | SMARCA2 | SMARCA2 Entrez,  Source | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 | 6971 | -0.010 | 0.1752 | No |
81 | HDAC3 | HDAC3 Entrez,  Source | histone deacetylase 3 | 7165 | -0.013 | 0.1617 | No |
82 | BLMH | BLMH Entrez,  Source | bleomycin hydrolase | 7183 | -0.013 | 0.1615 | No |
83 | SLC38A3 | SLC38A3 Entrez,  Source | solute carrier family 38, member 3 | 7186 | -0.013 | 0.1624 | No |
84 | LAPTM5 | LAPTM5 Entrez,  Source | lysosomal associated multispanning membrane protein 5 | 7239 | -0.014 | 0.1597 | No |
85 | TTC1 | TTC1 Entrez,  Source | tetratricopeptide repeat domain 1 | 7298 | -0.014 | 0.1565 | No |
86 | GKN1 | GKN1 Entrez,  Source | gastrokine 1 | 7349 | -0.015 | 0.1540 | No |
87 | HCN3 | HCN3 Entrez,  Source | hyperpolarization activated cyclic nucleotide-gated potassium channel 3 | 7387 | -0.015 | 0.1525 | No |
88 | ADRA1A | ADRA1A Entrez,  Source | adrenergic, alpha-1A-, receptor | 7837 | -0.021 | 0.1204 | No |
89 | MCART1 | MCART1 Entrez,  Source | mitochondrial carrier triple repeat 1 | 7845 | -0.021 | 0.1217 | No |
90 | PACSIN3 | PACSIN3 Entrez,  Source | protein kinase C and casein kinase substrate in neurons 3 | 7941 | -0.023 | 0.1164 | No |
91 | AP2M1 | AP2M1 Entrez,  Source | adaptor-related protein complex 2, mu 1 subunit | 8011 | -0.024 | 0.1133 | No |
92 | SNCB | SNCB Entrez,  Source | synuclein, beta | 8013 | -0.024 | 0.1152 | No |
93 | ABCF3 | ABCF3 Entrez,  Source | ATP-binding cassette, sub-family F (GCN20), member 3 | 8244 | -0.027 | 0.1002 | No |
94 | FOSL1 | FOSL1 Entrez,  Source | FOS-like antigen 1 | 8279 | -0.028 | 0.1000 | No |
95 | TOB1 | TOB1 Entrez,  Source | transducer of ERBB2, 1 | 8322 | -0.028 | 0.0992 | No |
96 | VDR | VDR Entrez,  Source | vitamin D (1,25- dihydroxyvitamin D3) receptor | 8460 | -0.030 | 0.0915 | No |
97 | LRRFIP2 | LRRFIP2 Entrez,  Source | leucine rich repeat (in FLII) interacting protein 2 | 8529 | -0.031 | 0.0890 | No |
98 | PKN3 | PKN3 Entrez,  Source | protein kinase N3 | 8543 | -0.031 | 0.0907 | No |
99 | SPRED1 | SPRED1 Entrez,  Source | sprouty-related, EVH1 domain containing 1 | 8719 | -0.034 | 0.0804 | No |
100 | CRYBA2 | CRYBA2 Entrez,  Source | crystallin, beta A2 | 8928 | -0.037 | 0.0678 | No |
101 | DTX2 | DTX2 Entrez,  Source | deltex homolog 2 (Drosophila) | 8976 | -0.037 | 0.0675 | No |
102 | MARK1 | MARK1 Entrez,  Source | MAP/microtubule affinity-regulating kinase 1 | 9011 | -0.038 | 0.0682 | No |
103 | POLD4 | POLD4 Entrez,  Source | polymerase (DNA-directed), delta 4 | 9014 | -0.038 | 0.0713 | No |
104 | HSPB8 | HSPB8 Entrez,  Source | heat shock 22kDa protein 8 | 9051 | -0.038 | 0.0718 | No |
105 | SYT2 | SYT2 Entrez,  Source | synaptotagmin II | 9396 | -0.043 | 0.0496 | No |
106 | CALB2 | CALB2 Entrez,  Source | calbindin 2, 29kDa (calretinin) | 9436 | -0.044 | 0.0504 | No |
107 | ANK3 | ANK3 Entrez,  Source | ankyrin 3, node of Ranvier (ankyrin G) | 9444 | -0.044 | 0.0537 | No |
108 | IL11 | IL11 Entrez,  Source | interleukin 11 | 10189 | -0.057 | 0.0022 | No |
109 | GRIA1 | GRIA1 Entrez,  Source | glutamate receptor, ionotropic, AMPA 1 | 10271 | -0.058 | 0.0011 | No |
110 | EWSR1 | EWSR1 Entrez,  Source | Ewing sarcoma breakpoint region 1 | 10419 | -0.061 | -0.0048 | No |
111 | SLC22A18 | SLC22A18 Entrez,  Source | solute carrier family 22 (organic cation transporter), member 18 | 10589 | -0.064 | -0.0121 | No |
112 | ATP6V1B2 | ATP6V1B2 Entrez,  Source | ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 | 10631 | -0.065 | -0.0096 | No |
113 | SYNGR1 | SYNGR1 Entrez,  Source | synaptogyrin 1 | 11243 | -0.080 | -0.0489 | No |
114 | SLC26A1 | SLC26A1 Entrez,  Source | solute carrier family 26 (sulfate transporter), member 1 | 11762 | -0.094 | -0.0800 | No |
115 | SMPX | SMPX Entrez,  Source | small muscle protein, X-linked | 11886 | -0.099 | -0.0808 | No |
116 | EFNA1 | EFNA1 Entrez,  Source | ephrin-A1 | 11985 | -0.102 | -0.0794 | No |
117 | PSME4 | PSME4 Entrez,  Source | proteasome (prosome, macropain) activator subunit 4 | 12096 | -0.107 | -0.0785 | No |
118 | HEPH | HEPH Entrez,  Source | hephaestin | 12270 | -0.115 | -0.0817 | No |
119 | PLEC1 | PLEC1 Entrez,  Source | plectin 1, intermediate filament binding protein 500kDa | 12297 | -0.116 | -0.0736 | No |
120 | VAT1 | VAT1 Entrez,  Source | vesicle amine transport protein 1 homolog (T californica) | 12333 | -0.118 | -0.0661 | No |
121 | MET | MET Entrez,  Source | met proto-oncogene (hepatocyte growth factor receptor) | 12396 | -0.121 | -0.0604 | No |
122 | CDH23 | CDH23 Entrez,  Source | cadherin-like 23 | 12527 | -0.130 | -0.0590 | No |
123 | CD68 | CD68 Entrez,  Source | CD68 molecule | 12573 | -0.133 | -0.0509 | No |
124 | MMP9 | MMP9 Entrez,  Source | matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) | 12642 | -0.137 | -0.0443 | No |
125 | MAMDC2 | MAMDC2 Entrez,  Source | MAM domain containing 2 | 12670 | -0.139 | -0.0343 | No |
126 | USP3 | USP3 Entrez,  Source | ubiquitin specific peptidase 3 | 12845 | -0.158 | -0.0338 | No |
127 | DYRK1A | DYRK1A Entrez,  Source | dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A | 12862 | -0.160 | -0.0212 | No |
128 | STAT5B | STAT5B Entrez,  Source | signal transducer and activator of transcription 5B | 13204 | -0.257 | -0.0248 | No |
129 | GADD45G | GADD45G Entrez,  Source | growth arrest and DNA-damage-inducible, gamma | 13302 | -0.408 | 0.0030 | No |