Details for gene set V$COREBINDINGFACTOR

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	V$COREBINDINGFACTOR_Q6
Enrichment Score (ES)	0.47480443
Normalized Enrichment Score (NES)	1.7588161
Nominal p-value	0.0
FDR q-value	0.038995
FWER p-Value	0.997

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	VIM	VIM Entrez, Source	vimentin	6	0.953	0.0891	Yes
2	CYP17A1	CYP17A1 Entrez, Source	cytochrome P450, family 17, subfamily A, polypeptide 1	8	0.860	0.1699	Yes
3	EMP1	EMP1 Entrez, Source	epithelial membrane protein 1	44	0.606	0.2242	Yes
4	COL4A1	COL4A1 Entrez, Source	collagen, type IV, alpha 1	50	0.578	0.2782	Yes
5	RGS1	RGS1 Entrez, Source	regulator of G-protein signalling 1	140	0.372	0.3064	Yes
6	ANXA8	ANXA8 Entrez, Source	annexin A8	177	0.340	0.3357	Yes
7	CCL3	CCL3 Entrez, Source	chemokine (C-C motif) ligand 3	183	0.333	0.3666	Yes
8	PTK2B	PTK2B Entrez, Source	PTK2B protein tyrosine kinase 2 beta	279	0.262	0.3841	Yes
9	LTBP1	LTBP1 Entrez, Source	latent transforming growth factor beta binding protein 1	372	0.219	0.3977	Yes
10	AKAP2	AKAP2 Entrez, Source	A kinase (PRKA) anchor protein 2	481	0.186	0.4070	Yes
11	IGSF4	IGSF4 Entrez, Source	immunoglobulin superfamily, member 4	517	0.180	0.4212	Yes
12	SCRN1	SCRN1 Entrez, Source	secernin 1	568	0.170	0.4334	Yes
13	IL17RE	IL17RE Entrez, Source	interleukin 17 receptor E	574	0.168	0.4489	Yes
14	PPP1R14C	PPP1R14C Entrez, Source	protein phosphatase 1, regulatory (inhibitor) subunit 14C	807	0.139	0.4444	Yes
15	FLI1	FLI1 Entrez, Source	Friend leukemia virus integration 1	849	0.134	0.4539	Yes
16	CD69	CD69 Entrez, Source	CD69 molecule	898	0.129	0.4625	Yes
17	CCR1	CCR1 Entrez, Source	chemokine (C-C motif) receptor 1	979	0.123	0.4680	Yes
18	LIF	LIF Entrez, Source	leukemia inhibitory factor (cholinergic differentiation factor)	1037	0.118	0.4748	Yes
19	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1192	0.110	0.4735	No
20	SULF1	SULF1 Entrez, Source	sulfatase 1	1470	0.095	0.4615	No
21	LEMD2	LEMD2 Entrez, Source	LEM domain containing 2	1488	0.095	0.4691	No
22	RAMP2	RAMP2 Entrez, Source	receptor (calcitonin) activity modifying protein 2	1641	0.087	0.4659	No
23	BMPR2	BMPR2 Entrez, Source	bone morphogenetic protein receptor, type II (serine/threonine kinase)	1820	0.080	0.4599	No
24	ADD1	ADD1 Entrez, Source	adducin 1 (alpha)	2026	0.072	0.4512	No
25	GZMB	GZMB Entrez, Source	granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)	2045	0.071	0.4565	No
26	TACSTD2	TACSTD2 Entrez, Source	tumor-associated calcium signal transducer 2	2200	0.067	0.4512	No
27	DIABLO	DIABLO Entrez, Source	diablo homolog (Drosophila)	2448	0.061	0.4382	No
28	GSK3B	GSK3B Entrez, Source	glycogen synthase kinase 3 beta	2479	0.060	0.4416	No
29	RIN1	RIN1 Entrez, Source	Ras and Rab interactor 1	2778	0.053	0.4241	No
30	ENTPD3	ENTPD3 Entrez, Source	ectonucleoside triphosphate diphosphohydrolase 3	2795	0.053	0.4279	No
31	RHOG	RHOG Entrez, Source	ras homolog gene family, member G (rho G)	2819	0.052	0.4311	No
32	NFIX	NFIX Entrez, Source	nuclear factor I/X (CCAAT-binding transcription factor)	2946	0.050	0.4262	No
33	NR4A3	NR4A3 Entrez, Source	nuclear receptor subfamily 4, group A, member 3	2974	0.049	0.4288	No
34	NGB	NGB Entrez, Source	neuroglobin	3301	0.043	0.4082	No
35	MAMDC1	MAMDC1 Entrez, Source	MAM domain containing 1	3395	0.041	0.4049	No
36	CCL4	CCL4 Entrez, Source	chemokine (C-C motif) ligand 4	3468	0.039	0.4032	No
37	ELAVL3	ELAVL3 Entrez, Source	ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	3483	0.039	0.4058	No
38	IL13	IL13 Entrez, Source	interleukin 13	3501	0.039	0.4081	No
39	UBL3	UBL3 Entrez, Source	ubiquitin-like 3	3509	0.038	0.4112	No
40	PDGFC	PDGFC Entrez, Source	platelet derived growth factor C	3584	0.037	0.4091	No
41	MAP1LC3A	MAP1LC3A Entrez, Source	microtubule-associated protein 1 light chain 3 alpha	3662	0.036	0.4067	No
42	CYGB	CYGB Entrez, Source	cytoglobin	4165	0.028	0.3713	No
43	TGM4	TGM4 Entrez, Source	transglutaminase 4 (prostate)	4185	0.027	0.3724	No
44	PSMA1	PSMA1 Entrez, Source	proteasome (prosome, macropain) subunit, alpha type, 1	4225	0.027	0.3720	No
45	HPCAL1	HPCAL1 Entrez, Source	hippocalcin-like 1	4353	0.025	0.3647	No
46	TRPM8	TRPM8 Entrez, Source	transient receptor potential cation channel, subfamily M, member 8	4554	0.022	0.3516	No
47	LUC7L	LUC7L Entrez, Source	LUC7-like (S. cerevisiae)	4592	0.021	0.3508	No
48	MAP3K11	MAP3K11 Entrez, Source	mitogen-activated protein kinase kinase kinase 11	4727	0.019	0.3425	No
49	IL23A	IL23A Entrez, Source	interleukin 23, alpha subunit p19	5247	0.012	0.3044	No
50	SCNN1A	SCNN1A Entrez, Source	sodium channel, nonvoltage-gated 1 alpha	5333	0.011	0.2990	No
51	MYL3	MYL3 Entrez, Source	myosin, light chain 3, alkali; ventricular, skeletal, slow	5408	0.010	0.2943	No
52	NRXN1	NRXN1 Entrez, Source	neurexin 1	5683	0.006	0.2741	No
53	SLC37A4	SLC37A4 Entrez, Source	solute carrier family 37 (glycerol-6-phosphate transporter), member 4	6249	-0.001	0.2315	No
54	CRTAC1	CRTAC1 Entrez, Source	cartilage acidic protein 1	6321	-0.002	0.2264	No
55	CD6	CD6 Entrez, Source	CD6 molecule	6361	-0.003	0.2237	No
56	C1QTNF6	C1QTNF6 Entrez, Source	C1q and tumor necrosis factor related protein 6	6402	-0.003	0.2209	No
57	ITGB7	ITGB7 Entrez, Source	integrin, beta 7	6475	-0.004	0.2159	No
58	PICALM	PICALM Entrez, Source	phosphatidylinositol binding clathrin assembly protein	6529	-0.005	0.2123	No
59	NRAS	NRAS Entrez, Source	neuroblastoma RAS viral (v-ras) oncogene homolog	6534	-0.005	0.2125	No
60	IL3	IL3 Entrez, Source	interleukin 3 (colony-stimulating factor, multiple)	6597	-0.006	0.2083	No
61	RUNX2	RUNX2 Entrez, Source	runt-related transcription factor 2	6625	-0.006	0.2069	No
62	FGD1	FGD1 Entrez, Source	FYVE, RhoGEF and PH domain containing 1 (faciogenital dysplasia)	6676	-0.007	0.2037	No
63	TNFSF4	TNFSF4 Entrez, Source	tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa)	6705	-0.007	0.2023	No
64	MAFG	MAFG Entrez, Source	v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	6733	-0.007	0.2009	No
65	BTG4	BTG4 Entrez, Source	B-cell translocation gene 4	6902	-0.009	0.1891	No
66	ERG	ERG Entrez, Source	v-ets erythroblastosis virus E26 oncogene homolog (avian)	6929	-0.010	0.1881	No
67	LUZP1	LUZP1 Entrez, Source	leucine zipper protein 1	7071	-0.012	0.1785	No
68	SLC12A6	SLC12A6 Entrez, Source	solute carrier family 12 (potassium/chloride transporters), member 6	7142	-0.012	0.1744	No
69	KCNJ1	KCNJ1 Entrez, Source	potassium inwardly-rectifying channel, subfamily J, member 1	7444	-0.016	0.1531	No
70	GRAP2	GRAP2 Entrez, Source	GRB2-related adaptor protein 2	7576	-0.018	0.1449	No
71	TBX5	TBX5 Entrez, Source	T-box 5	7774	-0.020	0.1319	No
72	FKBP14	FKBP14 Entrez, Source	FK506 binding protein 14, 22 kDa	7815	-0.021	0.1309	No
73	HEY1	HEY1 Entrez, Source	hairy/enhancer-of-split related with YRPW motif 1	8303	-0.028	0.0967	No
74	PPARG	PPARG Entrez, Source	peroxisome proliferative activated receptor, gamma	8513	-0.031	0.0838	No
75	NUTF2	NUTF2 Entrez, Source	nuclear transport factor 2	8594	-0.032	0.0808	No
76	CALR	CALR Entrez, Source	calreticulin	8727	-0.034	0.0740	No
77	GABRA6	GABRA6 Entrez, Source	gamma-aminobutyric acid (GABA) A receptor, alpha 6	8802	-0.035	0.0717	No
78	ARF3	ARF3 Entrez, Source	ADP-ribosylation factor 3	8812	-0.035	0.0743	No
79	XCL1	XCL1 Entrez, Source	chemokine (C motif) ligand 1	8819	-0.035	0.0771	No
80	PAX6	PAX6 Entrez, Source	paired box gene 6 (aniridia, keratitis)	8836	-0.035	0.0792	No
81	GPD1	GPD1 Entrez, Source	glycerol-3-phosphate dehydrogenase 1 (soluble)	8862	-0.036	0.0807	No
82	EIF5A	EIF5A Entrez, Source	eukaryotic translation initiation factor 5A	8947	-0.037	0.0778	No
83	OTP	OTP Entrez, Source	orthopedia homolog (Drosophila)	9009	-0.038	0.0767	No
84	TLE3	TLE3 Entrez, Source	transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	9039	-0.038	0.0781	No
85	JMJD1C	JMJD1C Entrez, Source	jumonji domain containing 1C	9316	-0.042	0.0612	No
86	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	9350	-0.043	0.0627	No
87	ANK3	ANK3 Entrez, Source	ankyrin 3, node of Ranvier (ankyrin G)	9444	-0.044	0.0598	No
88	NAPSA	NAPSA Entrez, Source	napsin A aspartic peptidase	9500	-0.045	0.0599	No
89	ACIN1	ACIN1 Entrez, Source	apoptotic chromatin condensation inducer 1	9611	-0.047	0.0560	No
90	CACNA2D3	CACNA2D3 Entrez, Source	calcium channel, voltage-dependent, alpha 2/delta 3 subunit	9729	-0.049	0.0518	No
91	ATP2A2	ATP2A2 Entrez, Source	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	9899	-0.052	0.0439	No
92	NDUFA9	NDUFA9 Entrez, Source	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa	9915	-0.052	0.0477	No
93	SLC2A3	SLC2A3 Entrez, Source	solute carrier family 2 (facilitated glucose transporter), member 3	9985	-0.053	0.0475	No
94	EIF2B3	EIF2B3 Entrez, Source	eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa	10129	-0.056	0.0419	No
95	ARHGEF2	ARHGEF2 Entrez, Source	rho/rac guanine nucleotide exchange factor (GEF) 2	10190	-0.057	0.0427	No
96	S100A9	S100A9 Entrez, Source	S100 calcium binding protein A9	10706	-0.066	0.0100	No
97	MADD	MADD Entrez, Source	MAP-kinase activating death domain	10727	-0.067	0.0147	No
98	PAFAH1B1	PAFAH1B1 Entrez, Source	platelet-activating factor acetylhydrolase, isoform Ib, alpha subunit 45kDa	10816	-0.069	0.0145	No
99	STAT2	STAT2 Entrez, Source	signal transducer and activator of transcription 2, 113kDa	10946	-0.072	0.0115	No
100	RUNX1	RUNX1 Entrez, Source	runt-related transcription factor 1 (acute myeloid leukemia 1; aml1 oncogene)	11134	-0.077	0.0046	No
101	SHOX2	SHOX2 Entrez, Source	short stature homeobox 2	11349	-0.083	-0.0038	No
102	ENPP1	ENPP1 Entrez, Source	ectonucleotide pyrophosphatase/phosphodiesterase 1	11362	-0.083	0.0031	No
103	PDE3B	PDE3B Entrez, Source	phosphodiesterase 3B, cGMP-inhibited	11375	-0.083	0.0100	No
104	CHAD	CHAD Entrez, Source	chondroadherin	11454	-0.085	0.0121	No
105	LMO2	LMO2 Entrez, Source	LIM domain only 2 (rhombotin-like 1)	11816	-0.096	-0.0061	No
106	ETF1	ETF1 Entrez, Source	eukaryotic translation termination factor 1	12179	-0.110	-0.0231	No
107	CD28	CD28 Entrez, Source	CD28 molecule	12261	-0.114	-0.0185	No
108	GPX1	GPX1 Entrez, Source	glutathione peroxidase 1	12567	-0.133	-0.0291	No
109	DRD3	DRD3 Entrez, Source	dopamine receptor D3	12734	-0.145	-0.0280	No
110	SOST	SOST Entrez, Source	sclerosteosis	12868	-0.161	-0.0229	No
111	PDZK1	PDZK1 Entrez, Source	PDZ domain containing 1	12895	-0.164	-0.0095	No
112	VRK1	VRK1 Entrez, Source	vaccinia related kinase 1	12979	-0.178	0.0010	No
113	ENPP2	ENPP2 Entrez, Source	ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin)	13234	-0.281	0.0082	No