Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos |
| Phenotype | class.cls#double_gel_8d_versus_double_gel_72h_repos |
| Upregulated in class | double_gel_72h |
| GeneSet | V$E2F_01 |
| Enrichment Score (ES) | -0.39970517 |
| Normalized Enrichment Score (NES) | -1.3030766 |
| Nominal p-value | 0.100446425 |
| FDR q-value | 0.56123793 |
| FWER p-Value | 1.0 |
| PROBE | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|
| 1 | HNRPD | HNRPD Entrez, Source | heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) | 389 | 0.213 | 0.0567 | No |
| 2 | USP2 | USP2 Entrez, Source | ubiquitin specific peptidase 2 | 694 | 0.151 | 0.0946 | No |
| 3 | KHSRP | KHSRP Entrez, Source | KH-type splicing regulatory protein (FUSE binding protein 2) | 977 | 0.123 | 0.1231 | No |
| 4 | WEE1 | WEE1 Entrez, Source | WEE1 homolog (S. pombe) | 1001 | 0.121 | 0.1704 | No |
| 5 | NR4A3 | NR4A3 Entrez, Source | nuclear receptor subfamily 4, group A, member 3 | 2974 | 0.049 | 0.0420 | No |
| 6 | GRIA4 | GRIA4 Entrez, Source | glutamate receptor, ionotrophic, AMPA 4 | 3441 | 0.040 | 0.0230 | No |
| 7 | LZTS2 | LZTS2 Entrez, Source | leucine zipper, putative tumor suppressor 2 | 3697 | 0.035 | 0.0181 | No |
| 8 | PIK3R3 | PIK3R3 Entrez, Source | phosphoinositide-3-kinase, regulatory subunit 3 (p55, gamma) | 4251 | 0.026 | -0.0129 | No |
| 9 | NLGN3 | NLGN3 Entrez, Source | neuroligin 3 | 4303 | 0.025 | -0.0065 | No |
| 10 | ALDH6A1 | ALDH6A1 Entrez, Source | aldehyde dehydrogenase 6 family, member A1 | 4355 | 0.025 | -0.0005 | No |
| 11 | FANCC | FANCC Entrez, Source | Fanconi anemia, complementation group C | 4880 | 0.017 | -0.0330 | No |
| 12 | PCNA | PCNA Entrez, Source | proliferating cell nuclear antigen | 5938 | 0.003 | -0.1112 | No |
| 13 | PVRL1 | PVRL1 Entrez, Source | poliovirus receptor-related 1 (herpesvirus entry mediator C; nectin) | 6070 | 0.001 | -0.1206 | No |
| 14 | DNMT1 | DNMT1 Entrez, Source | DNA (cytosine-5-)-methyltransferase 1 | 7279 | -0.014 | -0.2057 | No |
| 15 | MYC | MYC Entrez, Source | v-myc myelocytomatosis viral oncogene homolog (avian) | 7715 | -0.020 | -0.2305 | No |
| 16 | PRPS1 | PRPS1 Entrez, Source | phosphoribosyl pyrophosphate synthetase 1 | 8663 | -0.033 | -0.2883 | No |
| 17 | H2AFX | H2AFX Entrez, Source | H2A histone family, member X | 8894 | -0.036 | -0.2910 | No |
| 18 | PPP1R10 | PPP1R10 Entrez, Source | protein phosphatase 1, regulatory subunit 10 | 9190 | -0.040 | -0.2970 | No |
| 19 | ECEL1 | ECEL1 Entrez, Source | endothelin converting enzyme-like 1 | 9691 | -0.049 | -0.3150 | No |
| 20 | AK2 | AK2 Entrez, Source | adenylate kinase 2 | 9770 | -0.050 | -0.3008 | No |
| 21 | E2F1 | E2F1 Entrez, Source | E2F transcription factor 1 | 9789 | -0.050 | -0.2820 | No |
| 22 | PCSK1 | PCSK1 Entrez, Source | proprotein convertase subtilisin/kexin type 1 | 10524 | -0.063 | -0.3118 | No |
| 23 | ADNP | ADNP Entrez, Source | activity-dependent neuroprotector | 11378 | -0.083 | -0.3422 | No |
| 24 | CHD4 | CHD4 Entrez, Source | chromodomain helicase DNA binding protein 4 | 12144 | -0.109 | -0.3557 | Yes |
| 25 | HTF9C | HTF9C Entrez, Source | - | 12171 | -0.110 | -0.3132 | Yes |
| 26 | AMD1 | AMD1 Entrez, Source | adenosylmethionine decarboxylase 1 | 12195 | -0.111 | -0.2701 | Yes |
| 27 | CASP2 | CASP2 Entrez, Source | caspase 2, apoptosis-related cysteine peptidase (neural precursor cell expressed, developmentally down-regulated 2) | 12210 | -0.112 | -0.2261 | Yes |
| 28 | GATA6 | GATA6 Entrez, Source | GATA binding protein 6 | 12352 | -0.119 | -0.1888 | Yes |
| 29 | PTBP2 | PTBP2 Entrez, Source | polypyrimidine tract binding protein 2 | 12364 | -0.119 | -0.1417 | Yes |
| 30 | NOLC1 | NOLC1 Entrez, Source | nucleolar and coiled-body phosphoprotein 1 | 12447 | -0.123 | -0.0980 | Yes |
| 31 | SFMBT1 | SFMBT1 Entrez, Source | Scm-like with four mbt domains 1 | 12486 | -0.127 | -0.0497 | Yes |
| 32 | NASP | NASP Entrez, Source | nuclear autoantigenic sperm protein (histone-binding) | 12677 | -0.140 | -0.0077 | Yes |
| 33 | RARB | RARB Entrez, Source | retinoic acid receptor, beta | 12717 | -0.143 | 0.0470 | Yes |
