Details for gene set V$ER

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	V$ER_Q6
Enrichment Score (ES)	0.47454035
Normalized Enrichment Score (NES)	1.7657088
Nominal p-value	0.0016920473
FDR q-value	0.03760372
FWER p-Value	0.996

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	LPL	LPL Entrez, Source	lipoprotein lipase	24	0.680	0.0709	Yes
2	LOX	LOX Entrez, Source	lysyl oxidase	82	0.465	0.1164	Yes
3	FST	FST Entrez, Source	follistatin	132	0.388	0.1542	Yes
4	F13A1	F13A1 Entrez, Source	coagulation factor XIII, A1 polypeptide	135	0.379	0.1946	Yes
5	DNAJB4	DNAJB4 Entrez, Source	DnaJ (Hsp40) homolog, subfamily B, member 4	278	0.263	0.2119	Yes
6	SCHIP1	SCHIP1 Entrez, Source	schwannomin interacting protein 1	280	0.261	0.2398	Yes
7	SLC38A2	SLC38A2 Entrez, Source	solute carrier family 38, member 2	302	0.248	0.2648	Yes
8	PRKAA2	PRKAA2 Entrez, Source	protein kinase, AMP-activated, alpha 2 catalytic subunit	365	0.224	0.2841	Yes
9	KCNN2	KCNN2 Entrez, Source	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	398	0.210	0.3041	Yes
10	SLC20A1	SLC20A1 Entrez, Source	solute carrier family 20 (phosphate transporter), member 1	543	0.173	0.3117	Yes
11	TEF	TEF Entrez, Source	thyrotrophic embryonic factor	592	0.166	0.3258	Yes
12	GCM1	GCM1 Entrez, Source	glial cells missing homolog 1 (Drosophila)	623	0.162	0.3409	Yes
13	SPRY2	SPRY2 Entrez, Source	sprouty homolog 2 (Drosophila)	663	0.156	0.3546	Yes
14	SLC10A2	SLC10A2 Entrez, Source	solute carrier family 10 (sodium/bile acid cotransporter family), member 2	675	0.153	0.3702	Yes
15	MYADM	MYADM Entrez, Source	myeloid-associated differentiation marker	740	0.146	0.3810	Yes
16	NR2F2	NR2F2 Entrez, Source	nuclear receptor subfamily 2, group F, member 2	806	0.139	0.3909	Yes
17	NFKBIA	NFKBIA Entrez, Source	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	888	0.130	0.3987	Yes
18	FGF9	FGF9 Entrez, Source	fibroblast growth factor 9 (glia-activating factor)	921	0.127	0.4099	Yes
19	NR2F1	NR2F1 Entrez, Source	nuclear receptor subfamily 2, group F, member 1	1234	0.108	0.3979	Yes
20	PRG1	PRG1 Entrez, Source	proteoglycan 1, secretory granule	1285	0.105	0.4053	Yes
21	DAXX	DAXX Entrez, Source	death-associated protein 6	1338	0.102	0.4123	Yes
22	ZFP36L1	ZFP36L1 Entrez, Source	zinc finger protein 36, C3H type-like 1	1350	0.101	0.4223	Yes
23	ROM1	ROM1 Entrez, Source	retinal outer segment membrane protein 1	1429	0.097	0.4268	Yes
24	ATP1B4	ATP1B4 Entrez, Source	ATPase, (Na+)/K+ transporting, beta 4 polypeptide	1447	0.096	0.4358	Yes
25	SLC7A3	SLC7A3 Entrez, Source	solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	1489	0.095	0.4428	Yes
26	B4GALT3	B4GALT3 Entrez, Source	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3	1694	0.085	0.4365	Yes
27	KCNIP4	KCNIP4 Entrez, Source	Kv channel interacting protein 4	1705	0.085	0.4447	Yes
28	ROCK2	ROCK2 Entrez, Source	Rho-associated, coiled-coil containing protein kinase 2	1731	0.083	0.4518	Yes
29	SLC16A6	SLC16A6 Entrez, Source	solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	1775	0.081	0.4572	Yes
30	BMPR2	BMPR2 Entrez, Source	bone morphogenetic protein receptor, type II (serine/threonine kinase)	1820	0.080	0.4624	Yes
31	PLAC1	PLAC1 Entrez, Source	placenta-specific 1	1984	0.074	0.4580	Yes
32	NKX6-1	NKX6-1 Entrez, Source	NK6 transcription factor related, locus 1 (Drosophila)	2024	0.072	0.4628	Yes
33	ALDOA	ALDOA Entrez, Source	aldolase A, fructose-bisphosphate	2140	0.069	0.4614	Yes
34	GABARAPL2	GABARAPL2 Entrez, Source	GABA(A) receptor-associated protein-like 2	2152	0.069	0.4679	Yes
35	DUSP4	DUSP4 Entrez, Source	dual specificity phosphatase 4	2162	0.068	0.4745	Yes
36	CA4	CA4 Entrez, Source	carbonic anhydrase IV	2376	0.063	0.4651	No
37	CHRDL1	CHRDL1 Entrez, Source	chordin-like 1	2416	0.062	0.4688	No
38	GPC4	GPC4 Entrez, Source	glypican 4	2553	0.058	0.4647	No
39	GLG1	GLG1 Entrez, Source	golgi apparatus protein 1	2729	0.054	0.4573	No
40	OS-9			2848	0.052	0.4539	No
41	MXI1	MXI1 Entrez, Source	MAX interactor 1	2881	0.051	0.4570	No
42	CDH16	CDH16 Entrez, Source	cadherin 16, KSP-cadherin	3141	0.046	0.4423	No
43	PPARA	PPARA Entrez, Source	peroxisome proliferative activated receptor, alpha	3219	0.044	0.4412	No
44	GNAS	GNAS Entrez, Source	GNAS complex locus	3379	0.041	0.4336	No
45	PMP22	PMP22 Entrez, Source	peripheral myelin protein 22	3464	0.039	0.4314	No
46	MAP1LC3A	MAP1LC3A Entrez, Source	microtubule-associated protein 1 light chain 3 alpha	3662	0.036	0.4204	No
47	REST	REST Entrez, Source	RE1-silencing transcription factor	3737	0.035	0.4185	No
48	DCX	DCX Entrez, Source	doublecortex; lissencephaly, X-linked (doublecortin)	3837	0.033	0.4145	No
49	GFPT2	GFPT2 Entrez, Source	glutamine-fructose-6-phosphate transaminase 2	3912	0.032	0.4123	No
50	BARHL1	BARHL1 Entrez, Source	BarH-like 1 (Drosophila)	4137	0.028	0.3984	No
51	MLL5	MLL5 Entrez, Source	myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)	4215	0.027	0.3954	No
52	KCNJ15	KCNJ15 Entrez, Source	potassium inwardly-rectifying channel, subfamily J, member 15	4287	0.026	0.3928	No
53	BRAF	BRAF Entrez, Source	v-raf murine sarcoma viral oncogene homolog B1	4295	0.026	0.3950	No
54	CNNM2	CNNM2 Entrez, Source	cyclin M2	4503	0.022	0.3817	No
55	RASGRF1	RASGRF1 Entrez, Source	Ras protein-specific guanine nucleotide-releasing factor 1	4564	0.022	0.3795	No
56	WWP1	WWP1 Entrez, Source	WW domain containing E3 ubiquitin protein ligase 1	4986	0.015	0.3493	No
57	HCN4	HCN4 Entrez, Source	hyperpolarization activated cyclic nucleotide-gated potassium channel 4	4997	0.015	0.3502	No
58	PMFBP1	PMFBP1 Entrez, Source	polyamine modulated factor 1 binding protein 1	5126	0.014	0.3419	No
59	GAD2	GAD2 Entrez, Source	glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	5140	0.013	0.3424	No
60	MASP1	MASP1 Entrez, Source	mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	5174	0.013	0.3413	No
61	PHF1	PHF1 Entrez, Source	PHD finger protein 1	5282	0.011	0.3344	No
62	COX6C	COX6C Entrez, Source	cytochrome c oxidase subunit VIc	5343	0.010	0.3310	No
63	ESRRG	ESRRG Entrez, Source	estrogen-related receptor gamma	5378	0.010	0.3295	No
64	IHPK1	IHPK1 Entrez, Source	inositol hexaphosphate kinase 1	5396	0.010	0.3292	No
65	MAP1A	MAP1A Entrez, Source	microtubule-associated protein 1A	5715	0.005	0.3058	No
66	CAMKK2	CAMKK2 Entrez, Source	calcium/calmodulin-dependent protein kinase kinase 2, beta	5722	0.005	0.3059	No
67	ADCYAP1	ADCYAP1 Entrez, Source	adenylate cyclase activating polypeptide 1 (pituitary)	6037	0.002	0.2824	No
68	SATB1	SATB1 Entrez, Source	special AT-rich sequence binding protein 1 (binds to nuclear matrix/scaffold-associating DNA's)	6392	-0.003	0.2559	No
69	PICALM	PICALM Entrez, Source	phosphatidylinositol binding clathrin assembly protein	6529	-0.005	0.2461	No
70	EEF1A2	EEF1A2 Entrez, Source	eukaryotic translation elongation factor 1 alpha 2	6587	-0.006	0.2424	No
71	HOXA5	HOXA5 Entrez, Source	homeobox A5	6663	-0.007	0.2375	No
72	CUGBP1	CUGBP1 Entrez, Source	CUG triplet repeat, RNA binding protein 1	6720	-0.007	0.2340	No
73	JPH2	JPH2 Entrez, Source	junctophilin 2	6878	-0.009	0.2231	No
74	SLC35B1	SLC35B1 Entrez, Source	solute carrier family 35, member B1	6890	-0.009	0.2233	No
75	VGF	VGF Entrez, Source	VGF nerve growth factor inducible	6937	-0.010	0.2209	No
76	TPM3	TPM3 Entrez, Source	tropomyosin 3	6977	-0.010	0.2190	No
77	CLOCK	CLOCK Entrez, Source	clock homolog (mouse)	7102	-0.012	0.2109	No
78	SPATA7	SPATA7 Entrez, Source	spermatogenesis associated 7	7362	-0.015	0.1929	No
79	WNT4	WNT4 Entrez, Source	wingless-type MMTV integration site family, member 4	7687	-0.019	0.1705	No
80	SLC25A3	SLC25A3 Entrez, Source	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	7848	-0.021	0.1607	No
81	MAPK6	MAPK6 Entrez, Source	mitogen-activated protein kinase 6	8081	-0.025	0.1458	No
82	SLC25A1	SLC25A1 Entrez, Source	solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1	8088	-0.025	0.1480	No
83	UBQLN1	UBQLN1 Entrez, Source	ubiquilin 1	8177	-0.026	0.1442	No
84	COMMD3	COMMD3 Entrez, Source	COMM domain containing 3	8178	-0.026	0.1470	No
85	MAP2K5	MAP2K5 Entrez, Source	mitogen-activated protein kinase kinase 5	8547	-0.031	0.1225	No
86	RARA	RARA Entrez, Source	retinoic acid receptor, alpha	8732	-0.034	0.1122	No
87	SOCS2	SOCS2 Entrez, Source	suppressor of cytokine signaling 2	8876	-0.036	0.1053	No
88	SLC4A7	SLC4A7 Entrez, Source	solute carrier family 4, sodium bicarbonate cotransporter, member 7	8929	-0.037	0.1052	No
89	KCNJ2	KCNJ2 Entrez, Source	potassium inwardly-rectifying channel, subfamily J, member 2	9082	-0.039	0.0979	No
90	ARF5	ARF5 Entrez, Source	ADP-ribosylation factor 5	9169	-0.040	0.0956	No
91	XPNPEP1	XPNPEP1 Entrez, Source	X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	9226	-0.041	0.0958	No
92	MID1	MID1 Entrez, Source	midline 1 (Opitz/BBB syndrome)	9243	-0.041	0.0989	No
93	ATP5A1	ATP5A1 Entrez, Source	ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	9290	-0.042	0.0999	No
94	JMJD1C	JMJD1C Entrez, Source	jumonji domain containing 1C	9316	-0.042	0.1025	No
95	PGF	PGF Entrez, Source	placental growth factor, vascular endothelial growth factor-related protein	9350	-0.043	0.1045	No
96	DNMT3A	DNMT3A Entrez, Source	DNA (cytosine-5-)-methyltransferase 3 alpha	9385	-0.043	0.1066	No
97	TOMM40	TOMM40 Entrez, Source	translocase of outer mitochondrial membrane 40 homolog (yeast)	9457	-0.044	0.1060	No
98	AK2	AK2 Entrez, Source	adenylate kinase 2	9770	-0.050	0.0877	No
99	NLGN2	NLGN2 Entrez, Source	neuroligin 2	9868	-0.051	0.0858	No
100	MEOX2	MEOX2 Entrez, Source	mesenchyme homeobox 2	10109	-0.055	0.0736	No
101	CD37	CD37 Entrez, Source	CD37 molecule	10171	-0.056	0.0750	No
102	COL10A1	COL10A1 Entrez, Source	collagen, type X, alpha 1(Schmid metaphyseal chondrodysplasia)	10315	-0.059	0.0705	No
103	CKM	CKM Entrez, Source	creatine kinase, muscle	10448	-0.061	0.0670	No
104	WNT5A	WNT5A Entrez, Source	wingless-type MMTV integration site family, member 5A	10507	-0.062	0.0693	No
105	LETM1	LETM1 Entrez, Source	leucine zipper-EF-hand containing transmembrane protein 1	10510	-0.062	0.0759	No
106	NDUFS1	NDUFS1 Entrez, Source	NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	10672	-0.066	0.0707	No
107	SAG	SAG Entrez, Source	S-antigen; retina and pineal gland (arrestin)	11489	-0.086	0.0182	No
108	NUDT4	NUDT4 Entrez, Source	nudix (nucleoside diphosphate linked moiety X)-type motif 4	11563	-0.088	0.0221	No
109	KCNH5	KCNH5 Entrez, Source	potassium voltage-gated channel, subfamily H (eag-related), member 5	11678	-0.091	0.0233	No
110	BZW2	BZW2 Entrez, Source	basic leucine zipper and W2 domains 2	11874	-0.098	0.0190	No
111	SMPX	SMPX Entrez, Source	small muscle protein, X-linked	11886	-0.099	0.0288	No
112	AGPS	AGPS Entrez, Source	alkylglycerone phosphate synthase	11901	-0.099	0.0383	No
113	GFAP	GFAP Entrez, Source	glial fibrillary acidic protein	12025	-0.104	0.0401	No
114	LCP1	LCP1 Entrez, Source	lymphocyte cytosolic protein 1 (L-plastin)	12229	-0.113	0.0368	No
115	PLEC1	PLEC1 Entrez, Source	plectin 1, intermediate filament binding protein 500kDa	12297	-0.116	0.0442	No
116	FKBP4	FKBP4 Entrez, Source	FK506 binding protein 4, 59kDa	12376	-0.120	0.0511	No
117	NDRG2	NDRG2 Entrez, Source	NDRG family member 2	13082	-0.204	0.0197	No