Details for gene set V$HFH1

Table: GSEA Results Summary

Dataset	double_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls #double_gel_8d_versus_double_gel_72h.class.cls #double_gel_8d_versus_double_gel_72h_repos
Phenotype	class.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in class	double_gel_8d
GeneSet	V$HFH1_01
Enrichment Score (ES)	0.5028472
Normalized Enrichment Score (NES)	1.8055837
Nominal p-value	0.0
FDR q-value	0.030998703
FWER p-Value	0.968

Table: GSEA details [plain text format]
	PROBE	GENE SYMBOL	GENE_TITLE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SCN4B	SCN4B Entrez, Source	sodium channel, voltage-gated, type IV, beta	74	0.481	0.0458	Yes
2	OMD	OMD Entrez, Source	osteomodulin	79	0.470	0.0957	Yes
3	FSTL1	FSTL1 Entrez, Source	follistatin-like 1	80	0.469	0.1458	Yes
4	EGR2	EGR2 Entrez, Source	early growth response 2 (Krox-20 homolog, Drosophila)	130	0.390	0.1838	Yes
5	FST	FST Entrez, Source	follistatin	132	0.388	0.2252	Yes
6	CITED2	CITED2 Entrez, Source	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	145	0.367	0.2635	Yes
7	PPP2R3A	PPP2R3A Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha	222	0.305	0.2903	Yes
8	LAMC1	LAMC1 Entrez, Source	laminin, gamma 1 (formerly LAMB2)	224	0.303	0.3227	Yes
9	SLC38A2	SLC38A2 Entrez, Source	solute carrier family 38, member 2	302	0.248	0.3434	Yes
10	ENPEP	ENPEP Entrez, Source	glutamyl aminopeptidase (aminopeptidase A)	338	0.234	0.3657	Yes
11	DPYSL2	DPYSL2 Entrez, Source	dihydropyrimidinase-like 2	366	0.223	0.3875	Yes
12	CRH	CRH Entrez, Source	corticotropin releasing hormone	541	0.173	0.3929	Yes
13	MAPK3	MAPK3 Entrez, Source	mitogen-activated protein kinase 3	631	0.160	0.4033	Yes
14	OTX2	OTX2 Entrez, Source	orthodenticle homolog 2 (Drosophila)	708	0.150	0.4136	Yes
15	NCDN	NCDN Entrez, Source	neurochondrin	774	0.142	0.4239	Yes
16	LMO4	LMO4 Entrez, Source	LIM domain only 4	827	0.136	0.4345	Yes
17	IHPK2	IHPK2 Entrez, Source	inositol hexaphosphate kinase 2	835	0.136	0.4485	Yes
18	PITX2	PITX2 Entrez, Source	paired-like homeodomain transcription factor 2	850	0.134	0.4618	Yes
19	FGF9	FGF9 Entrez, Source	fibroblast growth factor 9 (glia-activating factor)	921	0.127	0.4701	Yes
20	NR4A1	NR4A1 Entrez, Source	nuclear receptor subfamily 4, group A, member 1	1192	0.110	0.4615	Yes
21	DUSP1	DUSP1 Entrez, Source	dual specificity phosphatase 1	1297	0.104	0.4648	Yes
22	ING3	ING3 Entrez, Source	inhibitor of growth family, member 3	1398	0.099	0.4677	Yes
23	EFNA5	EFNA5 Entrez, Source	ephrin-A5	1436	0.097	0.4753	Yes
24	ATP1B4	ATP1B4 Entrez, Source	ATPase, (Na+)/K+ transporting, beta 4 polypeptide	1447	0.096	0.4848	Yes
25	EIF4EBP2	EIF4EBP2 Entrez, Source	eukaryotic translation initiation factor 4E binding protein 2	1553	0.091	0.4866	Yes
26	KCNIP4	KCNIP4 Entrez, Source	Kv channel interacting protein 4	1705	0.085	0.4843	Yes
27	SLC16A6	SLC16A6 Entrez, Source	solute carrier family 16, member 6 (monocarboxylic acid transporter 7)	1775	0.081	0.4878	Yes
28	LCP2	LCP2 Entrez, Source	lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	1811	0.080	0.4937	Yes
29	SCG3	SCG3 Entrez, Source	secretogranin III	1896	0.077	0.4955	Yes
30	PRKAG1	PRKAG1 Entrez, Source	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	1908	0.076	0.5028	Yes
31	TACSTD2	TACSTD2 Entrez, Source	tumor-associated calcium signal transducer 2	2200	0.067	0.4881	No
32	BCL11A	BCL11A Entrez, Source	B-cell CLL/lymphoma 11A (zinc finger protein)	2222	0.067	0.4936	No
33	LGI1	LGI1 Entrez, Source	leucine-rich, glioma inactivated 1	2365	0.063	0.4896	No
34	HR	HR Entrez, Source	hairless homolog (mouse)	2751	0.054	0.4663	No
35	NFIB	NFIB Entrez, Source	nuclear factor I/B	3057	0.047	0.4483	No
36	NRP1	NRP1 Entrez, Source	neuropilin 1	3304	0.042	0.4343	No
37	SUMO1	SUMO1 Entrez, Source	SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)	3347	0.042	0.4355	No
38	ESM1	ESM1 Entrez, Source	endothelial cell-specific molecule 1	3387	0.041	0.4369	No
39	PHEX	PHEX Entrez, Source	phosphate regulating endopeptidase homolog, X-linked (hypophosphatemia, vitamin D resistant rickets)	3518	0.038	0.4312	No
40	NEO1	NEO1 Entrez, Source	neogenin homolog 1 (chicken)	3835	0.033	0.4109	No
41	IBSP	IBSP Entrez, Source	integrin-binding sialoprotein (bone sialoprotein, bone sialoprotein II)	3929	0.031	0.4072	No
42	CACNA1D	CACNA1D Entrez, Source	calcium channel, voltage-dependent, L type, alpha 1D subunit	4135	0.028	0.3947	No
43	NLGN3	NLGN3 Entrez, Source	neuroligin 3	4303	0.025	0.3848	No
44	CSNK1G3	CSNK1G3 Entrez, Source	casein kinase 1, gamma 3	4483	0.023	0.3737	No
45	INHBA	INHBA Entrez, Source	inhibin, beta A (activin A, activin AB alpha polypeptide)	4596	0.021	0.3675	No
46	VAX1	VAX1 Entrez, Source	ventral anterior homeobox 1	4721	0.019	0.3602	No
47	CYP26B1	CYP26B1 Entrez, Source	cytochrome P450, family 26, subfamily B, polypeptide 1	4879	0.017	0.3502	No
48	FOXD3	FOXD3 Entrez, Source	forkhead box D3	4916	0.016	0.3492	No
49	CAPN3	CAPN3 Entrez, Source	calpain 3, (p94)	4955	0.016	0.3480	No
50	SLU7	SLU7 Entrez, Source	-	4976	0.016	0.3482	No
51	MAPK10	MAPK10 Entrez, Source	mitogen-activated protein kinase 10	5148	0.013	0.3367	No
52	HTR1B	HTR1B Entrez, Source	5-hydroxytryptamine (serotonin) receptor 1B	5221	0.012	0.3326	No
53	NCAM1	NCAM1 Entrez, Source	neural cell adhesion molecule 1	5249	0.012	0.3318	No
54	WNT2	WNT2 Entrez, Source	wingless-type MMTV integration site family member 2	5871	0.004	0.2853	No
55	ICK	ICK Entrez, Source	intestinal cell (MAK-like) kinase	6039	0.002	0.2729	No
56	NTN1	NTN1 Entrez, Source	netrin 1	6053	0.001	0.2720	No
57	C1QTNF6	C1QTNF6 Entrez, Source	C1q and tumor necrosis factor related protein 6	6402	-0.003	0.2461	No
58	PPP1CB	PPP1CB Entrez, Source	protein phosphatase 1, catalytic subunit, beta isoform	6632	-0.006	0.2295	No
59	SMAD1	SMAD1 Entrez, Source	SMAD, mothers against DPP homolog 1 (Drosophila)	6658	-0.007	0.2283	No
60	ITGB3BP	ITGB3BP Entrez, Source	integrin beta 3 binding protein (beta3-endonexin)	6849	-0.009	0.2149	No
61	ASPA	ASPA Entrez, Source	aspartoacylase (Canavan disease)	7439	-0.016	0.1721	No
62	SLIT3	SLIT3 Entrez, Source	slit homolog 3 (Drosophila)	7586	-0.018	0.1630	No
63	BUB3	BUB3 Entrez, Source	BUB3 budding uninhibited by benzimidazoles 3 homolog (yeast)	7602	-0.018	0.1638	No
64	NTF3	NTF3 Entrez, Source	neurotrophin 3	7788	-0.021	0.1520	No
65	SECISBP2	SECISBP2 Entrez, Source	SECIS binding protein 2	8027	-0.024	0.1366	No
66	SLC39A8	SLC39A8 Entrez, Source	solute carrier family 39 (zinc transporter), member 8	8133	-0.026	0.1314	No
67	GRIK2	GRIK2 Entrez, Source	glutamate receptor, ionotropic, kainate 2	8215	-0.027	0.1281	No
68	TOB1	TOB1 Entrez, Source	transducer of ERBB2, 1	8322	-0.028	0.1231	No
69	CLDN8	CLDN8 Entrez, Source	claudin 8	8413	-0.030	0.1195	No
70	HSD11B1	HSD11B1 Entrez, Source	hydroxysteroid (11-beta) dehydrogenase 1	8552	-0.031	0.1125	No
71	OTX1	OTX1 Entrez, Source	orthodenticle homolog 1 (Drosophila)	8583	-0.032	0.1136	No
72	HHEX	HHEX Entrez, Source	homeobox, hematopoietically expressed	8800	-0.035	0.1010	No
73	OTP	OTP Entrez, Source	orthopedia homolog (Drosophila)	9009	-0.038	0.0894	No
74	PPP1R10	PPP1R10 Entrez, Source	protein phosphatase 1, regulatory subunit 10	9190	-0.040	0.0801	No
75	SHANK2	SHANK2 Entrez, Source	SH3 and multiple ankyrin repeat domains 2	9249	-0.041	0.0801	No
76	ATP2A2	ATP2A2 Entrez, Source	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	9899	-0.052	0.0366	No
77	POU3F4	POU3F4 Entrez, Source	POU domain, class 3, transcription factor 4	9971	-0.053	0.0369	No
78	PPP2R2B	PPP2R2B Entrez, Source	protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	10110	-0.055	0.0324	No
79	SLC12A5	SLC12A5 Entrez, Source	solute carrier family 12, (potassium-chloride transporter) member 5	10117	-0.055	0.0379	No
80	TAF5L	TAF5L Entrez, Source	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa	10163	-0.056	0.0405	No
81	ARHGEF2	ARHGEF2 Entrez, Source	rho/rac guanine nucleotide exchange factor (GEF) 2	10190	-0.057	0.0445	No
82	GRB7	GRB7 Entrez, Source	growth factor receptor-bound protein 7	10194	-0.057	0.0504	No
83	GRIK3	GRIK3 Entrez, Source	glutamate receptor, ionotropic, kainate 3	10240	-0.057	0.0531	No
84	MRPS18B	MRPS18B Entrez, Source	mitochondrial ribosomal protein S18B	10423	-0.061	0.0458	No
85	PMCH	PMCH Entrez, Source	pro-melanin-concentrating hormone	11172	-0.078	-0.0023	No
86	ELF1	ELF1 Entrez, Source	E74-like factor 1 (ets domain transcription factor)	11340	-0.083	-0.0061	No
87	RPS6KB1	RPS6KB1 Entrez, Source	ribosomal protein S6 kinase, 70kDa, polypeptide 1	11564	-0.088	-0.0135	No
88	NR4A2	NR4A2 Entrez, Source	nuclear receptor subfamily 4, group A, member 2	11567	-0.088	-0.0043	No
89	PIM1	PIM1 Entrez, Source	pim-1 oncogene	11624	-0.090	0.0011	No
90	CYLN2	CYLN2 Entrez, Source	cytoplasmic linker 2	11697	-0.092	0.0055	No
91	TIMM8A	TIMM8A Entrez, Source	translocase of inner mitochondrial membrane 8 homolog A (yeast)	11939	-0.100	-0.0020	No
92	GTF2A1	GTF2A1 Entrez, Source	general transcription factor IIA, 1, 19/37kDa	12080	-0.106	-0.0012	No
93	ISG20	ISG20 Entrez, Source	interferon stimulated exonuclease gene 20kDa	12100	-0.107	0.0088	No
94	EFEMP1	EFEMP1 Entrez, Source	EGF-containing fibulin-like extracellular matrix protein 1	12182	-0.111	0.0145	No
95	CASK	CASK Entrez, Source	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	12276	-0.115	0.0198	No
96	IMPDH2	IMPDH2 Entrez, Source	IMP (inosine monophosphate) dehydrogenase 2	12451	-0.124	0.0198	No
97	GPX1	GPX1 Entrez, Source	glutathione peroxidase 1	12567	-0.133	0.0253	No
98	SSBP3	SSBP3 Entrez, Source	single stranded DNA binding protein 3	12700	-0.142	0.0305	No
99	DMD	DMD Entrez, Source	dystrophin (muscular dystrophy, Duchenne and Becker types)	12922	-0.168	0.0317	No