Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetV$OCT1_01
Enrichment Score (ES)0.5628102
Normalized Enrichment Score (NES)2.0470338
Nominal p-value0.0
FDR q-value0.00338059
FWER p-Value0.094
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$OCT1_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LPLLPL
Entrez,  Source
lipoprotein lipase240.6800.0764Yes
2MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)730.4840.1285Yes
3SLC24A3SLC24A3
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 3810.4670.1817Yes
4EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)1300.3900.2230Yes
5CITED2CITED2
Entrez,  Source
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 21450.3670.2642Yes
6FOXP1FOXP1
Entrez,  Source
forkhead box P11740.3430.3016Yes
7PPP2R3APPP2R3A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha2220.3050.3331Yes
8PFKFB1PFKFB1
Entrez,  Source
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 13110.2440.3545Yes
9ACTG2ACTG2
Entrez,  Source
actin, gamma 2, smooth muscle, enteric3910.2120.3730Yes
10IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 45170.1800.3842Yes
11CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 615590.1710.4008Yes
12CPDCPD
Entrez,  Source
carboxypeptidase D5650.1710.4200Yes
13LMO3LMO3
Entrez,  Source
LIM domain only 3 (rhombotin-like 2)5730.1690.4389Yes
14GCM1GCM1
Entrez,  Source
glial cells missing homolog 1 (Drosophila)6230.1620.4538Yes
15CSF3CSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)6850.1520.4668Yes
16OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)7080.1500.4823Yes
17NFIANFIA
Entrez,  Source
nuclear factor I/A7430.1450.4965Yes
18RHOBRHOB
Entrez,  Source
ras homolog gene family, member B7850.1410.5096Yes
19NR2F2NR2F2
Entrez,  Source
nuclear receptor subfamily 2, group F, member 28060.1390.5241Yes
20LMO4LMO4
Entrez,  Source
LIM domain only 48270.1360.5383Yes
21DSCR1DSCR1
Entrez,  Source
Down syndrome critical region gene 110980.1150.5311Yes
22ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A111830.1100.5375Yes
23SLC1A2SLC1A2
Entrez,  Source
solute carrier family 1 (glial high affinity glutamate transporter), member 212150.1090.5476Yes
24DLGAP4DLGAP4
Entrez,  Source
discs, large (Drosophila) homolog-associated protein 413170.1030.5519Yes
25SYT1SYT1
Entrez,  Source
synaptotagmin I13350.1020.5623Yes
26POU2F1POU2F1
Entrez,  Source
POU domain, class 2, transcription factor 114750.0950.5628Yes
27CDX2CDX2
Entrez,  Source
caudal type homeobox transcription factor 217600.0820.5508No
28NEUROG1NEUROG1
Entrez,  Source
neurogenin 118870.0770.5502No
29TBXAS1TBXAS1
Entrez,  Source
thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)21430.0690.5388No
30ID3ID3
Entrez,  Source
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein21810.0680.5438No
31ING1ING1
Entrez,  Source
inhibitor of growth family, member 122890.0650.5432No
32GPC4GPC4
Entrez,  Source
glypican 425530.0580.5301No
33SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1525850.0580.5344No
34PDGFRBPDGFRB
Entrez,  Source
platelet-derived growth factor receptor, beta polypeptide28710.0510.5188No
35NFIXNFIX
Entrez,  Source
nuclear factor I/X (CCAAT-binding transcription factor)29460.0500.5189No
36DLX1DLX1
Entrez,  Source
distal-less homeobox 130000.0480.5205No
37SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 230410.0480.5230No
38H3F3BH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)30950.0470.5243No
39CSN1S1CSN1S1
Entrez,  Source
casein alpha s132180.0440.5202No
40NUDT3NUDT3
Entrez,  Source
nudix (nucleoside diphosphate linked moiety X)-type motif 332900.0430.5198No
41GNB3GNB3
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 333600.0410.5193No
42FGF20FGF20
Entrez,  Source
fibroblast growth factor 2034080.0400.5204No
43KCNJ13KCNJ13
Entrez,  Source
potassium inwardly-rectifying channel, subfamily J, member 1336520.0360.5062No
44ZFHX1BZFHX1B
Entrez,  Source
zinc finger homeobox 1b38020.0330.4988No
45DUSP6DUSP6
Entrez,  Source
dual specificity phosphatase 642880.0260.4651No
46CDK2CDK2
Entrez,  Source
cyclin-dependent kinase 243100.0250.4664No
47ASCL3ASCL3
Entrez,  Source
achaete-scute complex (Drosophila) homolog-like 343330.0250.4677No
48ITPR3ITPR3
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 343440.0250.4698No
49RAB26RAB26
Entrez,  Source
RAB26, member RAS oncogene family46480.0200.4492No
50HPCAL4HPCAL4
Entrez,  Source
hippocalcin like 448680.0170.4347No
51DLL3DLL3
Entrez,  Source
delta-like 3 (Drosophila)51370.0130.4160No
52TSC1TSC1
Entrez,  Source
tuberous sclerosis 154100.0100.3965No
53SLC24A1SLC24A1
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 154230.0090.3967No
54RHOBTB2RHOBTB2
Entrez,  Source
Rho-related BTB domain containing 254500.0090.3958No
55FZD4FZD4
Entrez,  Source
frizzled homolog 4 (Drosophila)54950.0080.3934No
56MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 655050.0080.3937No
57NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta55210.0080.3935No
58ID4ID4
Entrez,  Source
inhibitor of DNA binding 4, dominant negative helix-loop-helix protein56610.0060.3837No
59NRXN1NRXN1
Entrez,  Source
neurexin 156830.0060.3828No
60TSGA14TSGA14
Entrez,  Source
testis specific, 1457760.0050.3764No
61IRX2IRX2
Entrez,  Source
iroquois homeobox protein 258370.0040.3723No
62GAB2GAB2
Entrez,  Source
GRB2-associated binding protein 258990.0030.3681No
63DGKGDGKG
Entrez,  Source
diacylglycerol kinase, gamma 90kDa59340.0030.3658No
64PCDH8PCDH8
Entrez,  Source
protocadherin 859870.0020.3622No
65KCNN3KCNN3
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 360080.0020.3609No
66NRXN3NRXN3
Entrez,  Source
neurexin 36247-0.0010.3431No
67ATP6V0CATP6V0C
Entrez,  Source
ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c6333-0.0020.3369No
68LRRN1LRRN1
Entrez,  Source
leucine rich repeat neuronal 16617-0.0060.3163No
69HOXA5HOXA5
Entrez,  Source
homeobox A56663-0.0070.3136No
70PPP1CCPPP1CC
Entrez,  Source
protein phosphatase 1, catalytic subunit, gamma isoform6696-0.0070.3120No
71CXXC4CXXC4
Entrez,  Source
CXXC finger 46791-0.0080.3058No
72GPR85GPR85
Entrez,  Source
G protein-coupled receptor 856883-0.0090.3000No
73CRYZL1CRYZL1
Entrez,  Source
crystallin, zeta (quinone reductase)-like 17045-0.0110.2892No
74TCF4TCF4
Entrez,  Source
transcription factor 47176-0.0130.2808No
75MTUS1MTUS1
Entrez,  Source
mitochondrial tumor suppressor 17445-0.0160.2624No
76ADORA2AADORA2A
Entrez,  Source
adenosine A2a receptor7525-0.0170.2584No
77ATP1B2ATP1B2
Entrez,  Source
ATPase, Na+/K+ transporting, beta 2 polypeptide7724-0.0200.2457No
78ALKALK
Entrez,  Source
anaplastic lymphoma kinase (Ki-1)7874-0.0220.2370No
79DNAH7DNAH7
Entrez,  Source
dynein, axonemal, heavy chain 78067-0.0240.2253No
80THRATHRA
Entrez,  Source
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)8105-0.0250.2254No
81CCND1CCND1
Entrez,  Source
cyclin D18524-0.0310.1974No
82TCF2TCF2
Entrez,  Source
transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor8766-0.0340.1831No
83PAX6PAX6
Entrez,  Source
paired box gene 6 (aniridia, keratitis)8836-0.0350.1820No
84TSNAXTSNAX
Entrez,  Source
translin-associated factor X8938-0.0370.1786No
85GPR4GPR4
Entrez,  Source
G protein-coupled receptor 48960-0.0370.1813No
86MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)9243-0.0410.1647No
87ANK3ANK3
Entrez,  Source
ankyrin 3, node of Ranvier (ankyrin G)9444-0.0440.1546No
88PHC2PHC2
Entrez,  Source
polyhomeotic homolog 2 (Drosophila)9654-0.0480.1444No
89NXPH1NXPH1
Entrez,  Source
neurexophilin 19817-0.0500.1379No
90POU3F4POU3F4
Entrez,  Source
POU domain, class 3, transcription factor 49971-0.0530.1325No
91PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)10269-0.0580.1167No
92NDNL2NDNL2
Entrez,  Source
necdin-like 210563-0.0630.1019No
93PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)10692-0.0660.0999No
94ACBD4ACBD4
Entrez,  Source
acyl-Coenzyme A binding domain containing 411202-0.0780.0704No
95ADNPADNP
Entrez,  Source
activity-dependent neuroprotector11378-0.0830.0668No
96SYNPRSYNPR
Entrez,  Source
synaptoporin11391-0.0840.0756No
97ITSN1ITSN1
Entrez,  Source
intersectin 1 (SH3 domain protein)11645-0.0900.0668No
98BAT2BAT2
Entrez,  Source
HLA-B associated transcript 212105-0.1070.0445No
99LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog12283-0.1150.0444No
100TCF12TCF12
Entrez,  Source
transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)12682-0.1400.0305No
101DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)12922-0.1680.0317No
Table: GSEA details [plain text format]



Fig 2: V$OCT1_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$OCT1_01: Random ES distribution   
Gene set null distribution of ES for V$OCT1_01