Datasetdouble_gel_and_single_gel_rma_expression_values_collapsed_to_symbols.class.cls
#double_gel_8d_versus_double_gel_72h.class.cls
#double_gel_8d_versus_double_gel_72h_repos
Phenotypeclass.cls#double_gel_8d_versus_double_gel_72h_repos
Upregulated in classdouble_gel_8d
GeneSetV$OCT1_B
Enrichment Score (ES)0.48098558
Normalized Enrichment Score (NES)1.7754278
Nominal p-value0.0
FDR q-value0.035832476
FWER p-Value0.993
Table: GSEA Results Summary



Fig 1: Enrichment plot: V$OCT1_B   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEGENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LPLLPL
Entrez,  Source
lipoprotein lipase240.6800.0700Yes
2MAFMAF
Entrez,  Source
v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)730.4840.1176Yes
3CDH13CDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)1280.3910.1548Yes
4EGR2EGR2
Entrez,  Source
early growth response 2 (Krox-20 homolog, Drosophila)1300.3900.1959Yes
5FOXP1FOXP1
Entrez,  Source
forkhead box P11740.3430.2290Yes
6GPM6AGPM6A
Entrez,  Source
glycoprotein M6A2210.3050.2577Yes
7PPP2R3APPP2R3A
Entrez,  Source
protein phosphatase 2 (formerly 2A), regulatory subunit B'', alpha2220.3050.2899Yes
8PFKFB1PFKFB1
Entrez,  Source
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 13110.2440.3091Yes
9DPYSL3DPYSL3
Entrez,  Source
dihydropyrimidinase-like 34990.1820.3142Yes
10IGSF4IGSF4
Entrez,  Source
immunoglobulin superfamily, member 45170.1800.3319Yes
11ADORA1ADORA1
Entrez,  Source
adenosine A1 receptor5470.1730.3479Yes
12CYR61CYR61
Entrez,  Source
cysteine-rich, angiogenic inducer, 615590.1710.3651Yes
13CPDCPD
Entrez,  Source
carboxypeptidase D5650.1710.3828Yes
14LMO3LMO3
Entrez,  Source
LIM domain only 3 (rhombotin-like 2)5730.1690.4001Yes
15CSF3CSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)6850.1520.4078Yes
16NR1D1NR1D1
Entrez,  Source
nuclear receptor subfamily 1, group D, member 16880.1510.4236Yes
17OTX2OTX2
Entrez,  Source
orthodenticle homolog 2 (Drosophila)7080.1500.4380Yes
18NFIANFIA
Entrez,  Source
nuclear factor I/A7430.1450.4508Yes
19RHOBRHOB
Entrez,  Source
ras homolog gene family, member B7850.1410.4625Yes
20TWIST1TWIST1
Entrez,  Source
twist homolog 1 (acrocephalosyndactyly 3; Saethre-Chotzen syndrome) (Drosophila)9780.1230.4611Yes
21ALDH1A1ALDH1A1
Entrez,  Source
aldehyde dehydrogenase 1 family, member A111830.1100.4573Yes
22SLC1A2SLC1A2
Entrez,  Source
solute carrier family 1 (glial high affinity glutamate transporter), member 212150.1090.4665Yes
23BDNFBDNF
Entrez,  Source
brain-derived neurotrophic factor12670.1060.4738Yes
24DLGAP4DLGAP4
Entrez,  Source
discs, large (Drosophila) homolog-associated protein 413170.1030.4810Yes
25CDX2CDX2
Entrez,  Source
caudal type homeobox transcription factor 217600.0820.4563No
26NEUROG1NEUROG1
Entrez,  Source
neurogenin 118870.0770.4549No
27FGF12FGF12
Entrez,  Source
fibroblast growth factor 1219470.0750.4583No
28FZD2FZD2
Entrez,  Source
frizzled homolog 2 (Drosophila)20190.0730.4606No
29TBXAS1TBXAS1
Entrez,  Source
thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)21430.0690.4586No
30VSNL1VSNL1
Entrez,  Source
visinin-like 121690.0680.4639No
31ID3ID3
Entrez,  Source
inhibitor of DNA binding 3, dominant negative helix-loop-helix protein21810.0680.4702No
32TAS2R13TAS2R13
Entrez,  Source
taste receptor, type 2, member 1322020.0670.4758No
33STAT4STAT4
Entrez,  Source
signal transducer and activator of transcription 422500.0660.4792No
34BCL2BCL2
Entrez,  Source
B-cell CLL/lymphoma 223240.0640.4805No
35GPC4GPC4
Entrez,  Source
glypican 425530.0580.4694No
36ARPC5ARPC5
Entrez,  Source
actin related protein 2/3 complex, subunit 5, 16kDa25840.0580.4733No
37SLC6A15SLC6A15
Entrez,  Source
solute carrier family 6, member 1525850.0580.4794No
38POLMPOLM
Entrez,  Source
polymerase (DNA directed), mu27220.0540.4748No
39MRASMRAS
Entrez,  Source
muscle RAS oncogene homolog27740.0530.4766No
40SFRP2SFRP2
Entrez,  Source
secreted frizzled-related protein 230410.0480.4615No
41H3F3BH3F3B
Entrez,  Source
H3 histone, family 3B (H3.3B)30950.0470.4625No
42NR2C2NR2C2
Entrez,  Source
nuclear receptor subfamily 2, group C, member 232970.0430.4518No
43GNB3GNB3
Entrez,  Source
guanine nucleotide binding protein (G protein), beta polypeptide 333600.0410.4515No
44TRPM1TRPM1
Entrez,  Source
transient receptor potential cation channel, subfamily M, member 139980.0300.4065No
45SLC39A13SLC39A13
Entrez,  Source
solute carrier family 39 (zinc transporter), member 1341190.0280.4005No
46DUSP6DUSP6
Entrez,  Source
dual specificity phosphatase 642880.0260.3905No
47CDK2CDK2
Entrez,  Source
cyclin-dependent kinase 243100.0250.3915No
48ASCL3ASCL3
Entrez,  Source
achaete-scute complex (Drosophila) homolog-like 343330.0250.3925No
49ITPR3ITPR3
Entrez,  Source
inositol 1,4,5-triphosphate receptor, type 343440.0250.3944No
50PPARGC1BPPARGC1B
Entrez,  Source
peroxisome proliferative activated receptor, gamma, coactivator 1, beta43720.0240.3949No
51BLNKBLNK
Entrez,  Source
B-cell linker45390.0220.3847No
52PTHLHPTHLH
Entrez,  Source
parathyroid hormone-like hormone45940.0210.3828No
53RAB26RAB26
Entrez,  Source
RAB26, member RAS oncogene family46480.0200.3810No
54HPCAL4HPCAL4
Entrez,  Source
hippocalcin like 448680.0170.3662No
55PRRX1PRRX1
Entrez,  Source
paired related homeobox 151890.0130.3434No
56TSC1TSC1
Entrez,  Source
tuberous sclerosis 154100.0100.3278No
57SLC24A1SLC24A1
Entrez,  Source
solute carrier family 24 (sodium/potassium/calcium exchanger), member 154230.0090.3279No
58RHOBTB2RHOBTB2
Entrez,  Source
Rho-related BTB domain containing 254500.0090.3269No
59MAP2K6MAP2K6
Entrez,  Source
mitogen-activated protein kinase kinase 655050.0080.3237No
60NFYBNFYB
Entrez,  Source
nuclear transcription factor Y, beta55210.0080.3234No
61NRXN1NRXN1
Entrez,  Source
neurexin 156830.0060.3118No
62TSGA14TSGA14
Entrez,  Source
testis specific, 1457760.0050.3054No
63CSNK1ECSNK1E
Entrez,  Source
casein kinase 1, epsilon58230.0040.3023No
64COL23A1COL23A1
Entrez,  Source
collagen, type XXIII, alpha 158700.0040.2993No
65GAB2GAB2
Entrez,  Source
GRB2-associated binding protein 258990.0030.2975No
66BIN3BIN3
Entrez,  Source
bridging integrator 359590.0030.2933No
67KCNN3KCNN3
Entrez,  Source
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 360080.0020.2899No
68NOTCH1NOTCH1
Entrez,  Source
Notch homolog 1, translocation-associated (Drosophila)61410.0000.2799No
69NRXN3NRXN3
Entrez,  Source
neurexin 36247-0.0010.2722No
70ESRRAESRRA
Entrez,  Source
estrogen-related receptor alpha6415-0.0030.2599No
71JUNDJUND
Entrez,  Source
jun D proto-oncogene6457-0.0040.2572No
72NRASNRAS
Entrez,  Source
neuroblastoma RAS viral (v-ras) oncogene homolog6534-0.0050.2520No
73LRRN1LRRN1
Entrez,  Source
leucine rich repeat neuronal 16617-0.0060.2464No
74CXXC4CXXC4
Entrez,  Source
CXXC finger 46791-0.0080.2342No
75FGF14FGF14
Entrez,  Source
fibroblast growth factor 147024-0.0110.2178No
76CRYZL1CRYZL1
Entrez,  Source
crystallin, zeta (quinone reductase)-like 17045-0.0110.2175No
77ARHGAP4ARHGAP4
Entrez,  Source
Rho GTPase activating protein 47114-0.0120.2136No
78TMOD2TMOD2
Entrez,  Source
tropomodulin 2 (neuronal)7253-0.0140.2046No
79ADORA2AADORA2A
Entrez,  Source
adenosine A2a receptor7525-0.0170.1860No
80EAF2EAF2
Entrez,  Source
ELL associated factor 27726-0.0200.1729No
81ALKALK
Entrez,  Source
anaplastic lymphoma kinase (Ki-1)7874-0.0220.1641No
82THRATHRA
Entrez,  Source
thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)8105-0.0250.1494No
83MYBPC1MYBPC1
Entrez,  Source
myosin binding protein C, slow type8761-0.0340.1035No
84TCF2TCF2
Entrez,  Source
transcription factor 2, hepatic; LF-B3; variant hepatic nuclear factor8766-0.0340.1068No
85PAX6PAX6
Entrez,  Source
paired box gene 6 (aniridia, keratitis)8836-0.0350.1054No
86GPR4GPR4
Entrez,  Source
G protein-coupled receptor 48960-0.0370.1000No
87MID1MID1
Entrez,  Source
midline 1 (Opitz/BBB syndrome)9243-0.0410.0830No
88NXPH1NXPH1
Entrez,  Source
neurexophilin 19817-0.0500.0450No
89POU3F4POU3F4
Entrez,  Source
POU domain, class 3, transcription factor 49971-0.0530.0391No
90PDE4DPDE4D
Entrez,  Source
phosphodiesterase 4D, cAMP-specific (phosphodiesterase E3 dunce homolog, Drosophila)10269-0.0580.0227No
91POU2F3POU2F3
Entrez,  Source
POU domain, class 2, transcription factor 310351-0.0590.0229No
92NDNL2NDNL2
Entrez,  Source
necdin-like 210563-0.0630.0137No
93CD86CD86
Entrez,  Source
CD86 molecule10637-0.0650.0150No
94PTENPTEN
Entrez,  Source
phosphatase and tensin homolog (mutated in multiple advanced cancers 1)10692-0.0660.0179No
95PCYT1BPCYT1B
Entrez,  Source
phosphate cytidylyltransferase 1, choline, beta10932-0.0720.0074No
96CRISP1CRISP1
Entrez,  Source
cysteine-rich secretory protein 111196-0.078-0.0042No
97ACBD4ACBD4
Entrez,  Source
acyl-Coenzyme A binding domain containing 411202-0.0780.0037No
98SYNPRSYNPR
Entrez,  Source
synaptoporin11391-0.084-0.0017No
99IFIT2IFIT2
Entrez,  Source
interferon-induced protein with tetratricopeptide repeats 211566-0.088-0.0055No
100ITSN1ITSN1
Entrez,  Source
intersectin 1 (SH3 domain protein)11645-0.090-0.0019No
101CD79BCD79B
Entrez,  Source
CD79b molecule, immunoglobulin-associated beta11950-0.101-0.0142No
102BAT2BAT2
Entrez,  Source
HLA-B associated transcript 212105-0.107-0.0145No
103LYNLYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog12283-0.115-0.0157No
104ABTB2ABTB2
Entrez,  Source
ankyrin repeat and BTB (POZ) domain containing 212516-0.129-0.0195No
105TCF12TCF12
Entrez,  Source
transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)12682-0.140-0.0172No
106DMDDMD
Entrez,  Source
dystrophin (muscular dystrophy, Duchenne and Becker types)12922-0.168-0.0175No
107SH3GL3SH3GL3
Entrez,  Source
SH3-domain GRB2-like 313033-0.194-0.0054No
108TCEAL1TCEAL1
Entrez,  Source
transcription elongation factor A (SII)-like 113220-0.2710.0092No
Table: GSEA details [plain text format]



Fig 2: V$OCT1_B   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: V$OCT1_B: Random ES distribution   
Gene set null distribution of ES for V$OCT1_B